RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 MAGI2Q86UL8 1455 aa21.09■□□□□ 0.97
HIF3A-206ENST00000472815 COL17A1Q9UMD9 1497 aaPredicted RBP21.09■□□□□ 0.97
HIF3A-206ENST00000472815 ANKRD30BQ9BXX2 1392 aa21.08■□□□□ 0.97
HIF3A-206ENST00000472815 PKD2Q13563 968 aa21.07■□□□□ 0.96
HIF3A-206ENST00000472815 DHX29Q7Z478 1369 aaKnown RBP21.07■□□□□ 0.96
HIF3A-206ENST00000472815 RAPGEF3O95398 923 aa21.07■□□□□ 0.96
HIF3A-206ENST00000472815 ZMYM4Q5VZL5 1548 aa21.05■□□□□ 0.96
HIF3A-206ENST00000472815 DEPDC5O75140 1603 aa21.05■□□□□ 0.96
HIF3A-206ENST00000472815 FOXD1Q16676 465 aa21.03■□□□□ 0.96
HIF3A-206ENST00000472815 KANK1Q14678 1352 aa21.03■□□□□ 0.96
HIF3A-206ENST00000472815 RPRD2Q5VT52 1461 aaKnown RBP21.03■□□□□ 0.96
HIF3A-206ENST00000472815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.02■□□□□ 0.96
HIF3A-206ENST00000472815 A2MP01023 1474 aa21.02■□□□□ 0.96
HIF3A-206ENST00000472815 ABCA6Q8N139 1617 aa20.98■□□□□ 0.95
HIF3A-206ENST00000472815 PPP1R15AO75807 674 aaPredicted RBP20.98■□□□□ 0.95
HIF3A-206ENST00000472815 PRDM15P57071 1507 aaPredicted RBP20.97■□□□□ 0.95
HIF3A-206ENST00000472815 BCORL1Q5H9F3 1711 aa20.97■□□□□ 0.95
HIF3A-206ENST00000472815 ZNF316A6NFI3 1004 aaPredicted RBP20.97■□□□□ 0.95
HIF3A-206ENST00000472815 KIF3BO15066 747 aa20.96■□□□□ 0.95
HIF3A-206ENST00000472815 RNF17Q9BXT8 1623 aaKnown RBP20.95■□□□□ 0.94
HIF3A-206ENST00000472815 DIP2CQ9Y2E4 1556 aa20.95■□□□□ 0.94
HIF3A-206ENST00000472815 TET3O43151 1660 aa20.94■□□□□ 0.94
HIF3A-206ENST00000472815 ARHGEF40Q8TER5 1519 aa20.94■□□□□ 0.94
HIF3A-206ENST00000472815 VWDEQ8N2E2 1590 aa20.93■□□□□ 0.94
HIF3A-206ENST00000472815 CCDC144AA2RUR9 1427 aa20.9■□□□□ 0.94
HIF3A-206ENST00000472815 MROH1Q8NDA8 1641 aa20.9■□□□□ 0.94
HIF3A-206ENST00000472815 ATP10AO60312 1499 aa20.89■□□□□ 0.94
HIF3A-206ENST00000472815 YEATS2Q9ULM3 1422 aa20.89■□□□□ 0.93
HIF3A-206ENST00000472815 E9PCH4 1651 aa20.87■□□□□ 0.93
HIF3A-206ENST00000472815 L3MBTL2Q969R5 705 aa20.87■□□□□ 0.93
HIF3A-206ENST00000472815 LMTK2Q8IWU2 1503 aa20.86■□□□□ 0.93
HIF3A-206ENST00000472815 REREQ9P2R6 1566 aa20.86■□□□□ 0.93
HIF3A-206ENST00000472815 SPHKAPQ2M3C7 1700 aa20.84■□□□□ 0.93
HIF3A-206ENST00000472815 EFCAB6Q5THR3 1501 aa20.83■□□□□ 0.92
HIF3A-206ENST00000472815 ZC3H13Q5T200 1668 aaKnown RBP20.82■□□□□ 0.92
HIF3A-206ENST00000472815 CEP152O94986 1710 aa20.81■□□□□ 0.92
HIF3A-206ENST00000472815 TRPM2O94759 1503 aa20.81■□□□□ 0.92
HIF3A-206ENST00000472815 GGT6Q6P531 493 aa20.79■□□□□ 0.92
HIF3A-206ENST00000472815 PLA2R1Q13018 1463 aa20.79■□□□□ 0.92
HIF3A-206ENST00000472815 PTPRTO14522 1441 aa20.78■□□□□ 0.92
HIF3A-206ENST00000472815 SIGLEC1Q9BZZ2 1709 aa20.78■□□□□ 0.92
HIF3A-206ENST00000472815 AGLP35573 1532 aa20.77■□□□□ 0.92
HIF3A-206ENST00000472815 WASHC2CQ9Y4E1 1318 aa20.77■□□□□ 0.92
HIF3A-206ENST00000472815 ABCC3O15438 1527 aa20.76■□□□□ 0.91
HIF3A-206ENST00000472815 CAMSAP1Q5T5Y3 1602 aa20.74■□□□□ 0.91
HIF3A-206ENST00000472815 DIEXFQ68CQ4 756 aaKnown RBP20.73■□□□□ 0.91
HIF3A-206ENST00000472815 PPP6R1Q9UPN7 881 aa20.73■□□□□ 0.91
HIF3A-206ENST00000472815 UHRF1BP1Q6BDS2 1440 aa20.71■□□□□ 0.91
HIF3A-206ENST00000472815 NEURL4Q96JN8 1562 aa20.7■□□□□ 0.9
HIF3A-206ENST00000472815 ARID4BQ4LE39 1312 aaPredicted RBP20.7■□□□□ 0.9
HIF3A-206ENST00000472815 CLTCL1P53675 1640 aa20.69■□□□□ 0.9
HIF3A-206ENST00000472815 ARHGAP31Q2M1Z3 1444 aa20.69■□□□□ 0.9
HIF3A-206ENST00000472815 KIF1BO60333 1816 aa20.69■□□□□ 0.9
HIF3A-206ENST00000472815 DCAF11Q8TEB1 546 aa20.68■□□□□ 0.9
HIF3A-206ENST00000472815 STAC3Q96MF2 364 aa20.68■□□□□ 0.9
HIF3A-206ENST00000472815 NPATQ14207 1427 aa20.68■□□□□ 0.9
HIF3A-206ENST00000472815 CNTLNQ9NXG0 1405 aa20.68■□□□□ 0.9
HIF3A-206ENST00000472815 EIF4G2P78344 907 aaKnown RBP eCLIP20.65■□□□□ 0.9
HIF3A-206ENST00000472815 NBPF8Q3BBV2 869 aa20.65■□□□□ 0.9
HIF3A-206ENST00000472815 SPATA31E1Q6ZUB1 1445 aa20.65■□□□□ 0.9
HIF3A-206ENST00000472815 RGL3Q3MIN7 710 aa20.64■□□□□ 0.9
HIF3A-206ENST00000472815 RALGAPBQ86X10 1494 aa20.64■□□□□ 0.89
HIF3A-206ENST00000472815 ZNF326Q5BKZ1 582 aaKnown RBP20.64■□□□□ 0.89
HIF3A-206ENST00000472815 CFAP65Q6ZU64 1925 aaKnown RBP20.62■□□□□ 0.89
HIF3A-206ENST00000472815 KDM2AQ9Y2K7 1162 aa20.62■□□□□ 0.89
HIF3A-206ENST00000472815 FER1L4A9Z1Z3 1794 aa20.62■□□□□ 0.89
HIF3A-206ENST00000472815 MLECQ14165 292 aa20.6■□□□□ 0.89
HIF3A-206ENST00000472815 NOS1P29475 1434 aa20.59■□□□□ 0.89
HIF3A-206ENST00000472815 PRAG1Q86YV5 1406 aa20.59■□□□□ 0.89
HIF3A-206ENST00000472815 ADAMTSL3P82987 1691 aa20.59■□□□□ 0.89
HIF3A-206ENST00000472815 ESF1Q9H501 851 aaKnown RBP20.58■□□□□ 0.88
HIF3A-206ENST00000472815 TRPM1Q7Z4N2 1603 aa20.57■□□□□ 0.88
HIF3A-206ENST00000472815 CLTCQ00610 1675 aaKnown RBP20.57■□□□□ 0.88
HIF3A-206ENST00000472815 PREX1Q8TCU6 1659 aa20.57■□□□□ 0.88
HIF3A-206ENST00000472815 HSPA5P11021 654 aaKnown RBP20.56■□□□□ 0.88
HIF3A-206ENST00000472815 UGGT1Q9NYU2 1555 aa20.55■□□□□ 0.88
HIF3A-206ENST00000472815 PIK3C2BO00750 1634 aa20.55■□□□□ 0.88
HIF3A-206ENST00000472815 ADGRB3O60242 1522 aa20.55■□□□□ 0.88
HIF3A-206ENST00000472815 MADDQ8WXG6 1647 aa20.55■□□□□ 0.88
HIF3A-206ENST00000472815 MROH2AA6NES4 1674 aa20.55■□□□□ 0.88
HIF3A-206ENST00000472815 ROCK2O75116 1388 aaKnown RBP20.54■□□□□ 0.88
HIF3A-206ENST00000472815 SLC52A1Q9NWF4 448 aa20.53■□□□□ 0.88
HIF3A-206ENST00000472815 CARD11Q9BXL7 1154 aa20.53■□□□□ 0.88
HIF3A-206ENST00000472815 LAMC1P11047 1609 aa20.52■□□□□ 0.88
HIF3A-206ENST00000472815 SYNMO15061 1565 aa20.52■□□□□ 0.88
HIF3A-206ENST00000472815 RIMS1Q86UR5 1692 aaKnown RBP20.52■□□□□ 0.88
HIF3A-206ENST00000472815 MYOM2P54296 1465 aa20.52■□□□□ 0.87
HIF3A-206ENST00000472815 USP47Q96K76 1375 aa20.51■□□□□ 0.87
HIF3A-206ENST00000472815 IFT172Q9UG01 1749 aa20.51■□□□□ 0.87
HIF3A-206ENST00000472815 HIRIP3Q9BW71 556 aaPredicted RBP20.5■□□□□ 0.87
HIF3A-206ENST00000472815 POLR1AO95602 1720 aaPredicted RBP20.49■□□□□ 0.87
HIF3A-206ENST00000472815 RPGRIP1LQ68CZ1 1315 aa20.49■□□□□ 0.87
HIF3A-206ENST00000472815 ERVK-7P63135 1459 aa20.49■□□□□ 0.87
HIF3A-206ENST00000472815 KIAA1210Q9ULL0 1709 aa20.49■□□□□ 0.87
HIF3A-206ENST00000472815 CHGAP10645 457 aaKnown RBP20.48■□□□□ 0.87
HIF3A-206ENST00000472815 GPRASP1Q5JY77 1395 aa20.48■□□□□ 0.87
HIF3A-206ENST00000472815 C3P01024 1663 aa20.47■□□□□ 0.87
HIF3A-206ENST00000472815 SPATA31D1Q6ZQQ2 1576 aa20.46■□□□□ 0.87
HIF3A-206ENST00000472815 PPLO60437 1756 aa20.46■□□□□ 0.87
HIF3A-206ENST00000472815 ZMYM3Q14202 1370 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms