RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 OSBPP22059 807 aa4.53□□□□□ -1.68
XRN1-210ENST00000472697 POM121CA8CG34 1229 aa4.53□□□□□ -1.68
XRN1-210ENST00000472697 AMHR2Q16671 573 aa4.53□□□□□ -1.68
XRN1-210ENST00000472697 PROSER2Q86WR7 435 aaPredicted RBP4.52□□□□□ -1.69
XRN1-210ENST00000472697 CDHR5Q9HBB8 845 aa4.52□□□□□ -1.69
XRN1-210ENST00000472697 MFAP1P55081 439 aaKnown RBP4.52□□□□□ -1.69
XRN1-210ENST00000472697 MAP2K5Q13163 448 aa4.52□□□□□ -1.69
XRN1-210ENST00000472697 DDRGK1Q96HY6 314 aa4.52□□□□□ -1.69
XRN1-210ENST00000472697 SCUBE2Q9NQ36 999 aa4.51□□□□□ -1.69
XRN1-210ENST00000472697 A6NJR5 290 aa4.51□□□□□ -1.69
XRN1-210ENST00000472697 GPHNQ9NQX3 736 aaPredicted RBP4.51□□□□□ -1.69
XRN1-210ENST00000472697 METRNQ9UJH8 293 aa4.51□□□□□ -1.69
XRN1-210ENST00000472697 COG6Q9Y2V7 657 aa4.51□□□□□ -1.69
XRN1-210ENST00000472697 SPNS2Q8IVW8 549 aa4.5□□□□□ -1.69
XRN1-210ENST00000472697 SOX12O15370 315 aa4.5□□□□□ -1.69
XRN1-210ENST00000472697 POTEJP0CG39 1038 aa4.5□□□□□ -1.69
XRN1-210ENST00000472697 FLIIQ13045 1269 aa4.5□□□□□ -1.69
XRN1-210ENST00000472697 MINK1Q8N4C8 1332 aaPredicted RBP4.49□□□□□ -1.69
XRN1-210ENST00000472697 GNPATO15228 680 aa4.49□□□□□ -1.69
XRN1-210ENST00000472697 MDM2Q00987 491 aaPredicted RBP4.49□□□□□ -1.69
XRN1-210ENST00000472697 GDPD2Q9HCC8 539 aa4.49□□□□□ -1.69
XRN1-210ENST00000472697 ATN1P54259 1190 aaPredicted RBP4.49□□□□□ -1.69
XRN1-210ENST00000472697 FAM163AQ96GL9 167 aaPredicted RBP4.49□□□□□ -1.69
XRN1-210ENST00000472697 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.48□□□□□ -1.69
XRN1-210ENST00000472697 RFX1P22670 979 aa4.48□□□□□ -1.69
XRN1-210ENST00000472697 TIE1P35590 1138 aa4.48□□□□□ -1.69
XRN1-210ENST00000472697 TMCO4Q5TGY1 634 aa4.48□□□□□ -1.69
XRN1-210ENST00000472697 ADAMTS19Q8TE59 1207 aa4.48□□□□□ -1.69
XRN1-210ENST00000472697 TMEM106CQ9BVX2 250 aa4.48□□□□□ -1.69
XRN1-210ENST00000472697 BMP2KQ9NSY1 1161 aaPredicted RBP4.48□□□□□ -1.69
XRN1-210ENST00000472697 ATP1B4Q9UN42 357 aaPredicted RBP4.48□□□□□ -1.69
XRN1-210ENST00000472697 C2orf72A6NCS6 295 aa4.47□□□□□ -1.69
XRN1-210ENST00000472697 PTGDRQ13258 359 aa4.47□□□□□ -1.69
XRN1-210ENST00000472697 TMEM92Q6UXU6 159 aa4.47□□□□□ -1.69
XRN1-210ENST00000472697 TRAIPQ9BWF2 469 aa4.47□□□□□ -1.69
XRN1-210ENST00000472697 NPDC1Q9NQX5 325 aaPredicted RBP4.47□□□□□ -1.69
XRN1-210ENST00000472697 POTEFA5A3E0 1075 aa4.46□□□□□ -1.7
XRN1-210ENST00000472697 BEGAINQ9BUH8 593 aa4.46□□□□□ -1.7
XRN1-210ENST00000472697 TSR1Q2NL82 804 aaKnown RBP4.46□□□□□ -1.7
XRN1-210ENST00000472697 PLPP6Q8IY26 295 aa4.46□□□□□ -1.7
XRN1-210ENST00000472697 MTMR14Q8NCE2 650 aa4.46□□□□□ -1.7
XRN1-210ENST00000472697 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.45□□□□□ -1.7
XRN1-210ENST00000472697 LIMD1Q9UGP4 676 aa4.45□□□□□ -1.7
XRN1-210ENST00000472697 CCDC97Q96F63 343 aaPredicted RBP4.45□□□□□ -1.7
XRN1-210ENST00000472697 TBC1D2BQ9UPU7 963 aa4.45□□□□□ -1.7
XRN1-210ENST00000472697 ZNF330Q9Y3S2 320 aaPredicted RBP4.45□□□□□ -1.7
XRN1-210ENST00000472697 UNCXA6NJT0 531 aa4.44□□□□□ -1.7
XRN1-210ENST00000472697 PCMTD1Q96MG8 357 aaPredicted RBP4.44□□□□□ -1.7
XRN1-210ENST00000472697 SSTR3P32745 418 aaPredicted RBP4.44□□□□□ -1.7
XRN1-210ENST00000472697 HIC1Q14526 733 aa4.44□□□□□ -1.7
XRN1-210ENST00000472697 CSPP1Q1MSJ5 1256 aa4.44□□□□□ -1.7
XRN1-210ENST00000472697 IER5LQ5T953 404 aa4.44□□□□□ -1.7
XRN1-210ENST00000472697 MYSM1Q5VVJ2 828 aa4.44□□□□□ -1.7
XRN1-210ENST00000472697 FBXW7Q969H0 707 aa4.44□□□□□ -1.7
XRN1-210ENST00000472697 TMUB1Q9BVT8 246 aa4.44□□□□□ -1.7
XRN1-210ENST00000472697 QPCTQ16769 361 aa4.43□□□□□ -1.7
XRN1-210ENST00000472697 MICALL2Q8IY33 904 aa4.43□□□□□ -1.7
XRN1-210ENST00000472697 GOPCQ9HD26 462 aa4.43□□□□□ -1.7
XRN1-210ENST00000472697 TTLL13PA6NNM8 815 aa4.43□□□□□ -1.7
XRN1-210ENST00000472697 SCNN1AP37088 669 aa4.43□□□□□ -1.7
XRN1-210ENST00000472697 FOXK1P85037 733 aa4.43□□□□□ -1.7
XRN1-210ENST00000472697 CDCA8Q53HL2 280 aa4.43□□□□□ -1.7
XRN1-210ENST00000472697 SH3D19Q5HYK7 790 aa4.42□□□□□ -1.7
XRN1-210ENST00000472697 GLMNQ92990 594 aa4.42□□□□□ -1.7
XRN1-210ENST00000472697 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.42□□□□□ -1.77e-8■■■□□ 15.9
XRN1-210ENST00000472697 GPR37L1O60883 481 aa4.42□□□□□ -1.7
XRN1-210ENST00000472697 ABL2P42684 1182 aa4.42□□□□□ -1.7
XRN1-210ENST00000472697 RBM33Q96EV2 1170 aaKnown RBP4.42□□□□□ -1.7
XRN1-210ENST00000472697 RFC5P40937 340 aa4.41□□□□□ -1.7
XRN1-210ENST00000472697 MAP3K9P80192 1104 aa4.41□□□□□ -1.7
XRN1-210ENST00000472697 PDCD7Q8N8D1 485 aaKnown RBP4.41□□□□□ -1.7
XRN1-210ENST00000472697 SERPINA10Q9UK55 444 aa4.4□□□□□ -1.7
XRN1-210ENST00000472697 C3orf80F5H4A9 247 aa4.4□□□□□ -1.71
XRN1-210ENST00000472697 KIF3CO14782 793 aa4.4□□□□□ -1.71
XRN1-210ENST00000472697 TBC1D12O60347 775 aa4.4□□□□□ -1.71
XRN1-210ENST00000472697 SKIV2LQ15477 1246 aaKnown RBP4.4□□□□□ -1.71
XRN1-210ENST00000472697 ILDR1Q86SU0 546 aaPredicted RBP4.4□□□□□ -1.71
XRN1-210ENST00000472697 COLQQ9Y215 455 aaPredicted RBP4.4□□□□□ -1.71
XRN1-210ENST00000472697 FCHSD2O94868 740 aa4.39□□□□□ -1.71
XRN1-210ENST00000472697 CALR3Q96L12 384 aaKnown RBP4.39□□□□□ -1.71
XRN1-210ENST00000472697 HMX1Q9NP08 348 aaPredicted RBP4.39□□□□□ -1.71
XRN1-210ENST00000472697 GOLGA2Q08379 1002 aa4.39□□□□□ -1.71
XRN1-210ENST00000472697 TMEM121BQ9BXQ6 578 aaPredicted RBP4.39□□□□□ -1.71
XRN1-210ENST00000472697 FAM217BQ9NTX9 383 aaPredicted RBP4.39□□□□□ -1.71
XRN1-210ENST00000472697 PCDHB15Q9Y5E8 787 aa4.39□□□□□ -1.71
XRN1-210ENST00000472697 SPDYE16A6NNV3 312 aaPredicted RBP4.39□□□□□ -1.71
XRN1-210ENST00000472697 GPCPD1Q9NPB8 672 aa4.39□□□□□ -1.71
XRN1-210ENST00000472697 NOM1Q5C9Z4 860 aaKnown RBP4.38□□□□□ -1.71
XRN1-210ENST00000472697 CFAP70Q5T0N1 1121 aa4.38□□□□□ -1.71
XRN1-210ENST00000472697 EPS8L1Q8TE68 723 aa4.38□□□□□ -1.71
XRN1-210ENST00000472697 HLA-CQ95604 372 aa4.38□□□□□ -1.71
XRN1-210ENST00000472697 TRIM35Q9UPQ4 493 aa4.38□□□□□ -1.71
XRN1-210ENST00000472697 IVNS1ABPQ9Y6Y0 642 aa4.38□□□□□ -1.71
XRN1-210ENST00000472697 SEC24BO95487 1268 aa4.38□□□□□ -1.71
XRN1-210ENST00000472697 SRPK2P78362 688 aaKnown RBP4.38□□□□□ -1.71
XRN1-210ENST00000472697 METTL3Q86U44 580 aaKnown RBP4.38□□□□□ -1.71
XRN1-210ENST00000472697 TBC1D2Q9BYX2 928 aa4.37□□□□□ -1.71
XRN1-210ENST00000472697 USP35Q9P2H5 1018 aa4.37□□□□□ -1.71
XRN1-210ENST00000472697 CLK2P49760 499 aaKnown RBP4.37□□□□□ -1.71
XRN1-210ENST00000472697 TMC2Q8TDI7 906 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms