RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 RRP7BPQ9NSQ0 103 aa8.7□□□□□ -1.02
EPHA4-212ENST00000472696 A2MP01023 1474 aa8.7□□□□□ -1.02
EPHA4-212ENST00000472696 AGLP35573 1532 aa8.7□□□□□ -1.02
EPHA4-212ENST00000472696 RAB3GAP2Q9H2M9 1393 aa8.69□□□□□ -1.02
EPHA4-212ENST00000472696 FAM135AQ9P2D6 1515 aa8.69□□□□□ -1.02
EPHA4-212ENST00000472696 DIP2CQ9Y2E4 1556 aa8.69□□□□□ -1.02
EPHA4-212ENST00000472696 ARHGEF40Q8TER5 1519 aa8.68□□□□□ -1.02
EPHA4-212ENST00000472696 ABCA6Q8N139 1617 aa8.68□□□□□ -1.02
EPHA4-212ENST00000472696 CLSPNQ9HAW4 1339 aa8.67□□□□□ -1.02
EPHA4-212ENST00000472696 KDM5DQ9BY66 1539 aa8.66□□□□□ -1.02
EPHA4-212ENST00000472696 DEPDC5O75140 1603 aa8.65□□□□□ -1.02
EPHA4-212ENST00000472696 YEATS2Q9ULM3 1422 aa8.65□□□□□ -1.02
EPHA4-212ENST00000472696 KANK1Q14678 1352 aa8.65□□□□□ -1.02
EPHA4-212ENST00000472696 RNF17Q9BXT8 1623 aaKnown RBP8.65□□□□□ -1.03
EPHA4-212ENST00000472696 UNC13BO14795 1591 aa8.65□□□□□ -1.03
EPHA4-212ENST00000472696 PRDM15P57071 1507 aaPredicted RBP8.64□□□□□ -1.03
EPHA4-212ENST00000472696 KIF3BO15066 747 aa8.63□□□□□ -1.03
EPHA4-212ENST00000472696 LMTK2Q8IWU2 1503 aa8.63□□□□□ -1.03
EPHA4-212ENST00000472696 ZC3H13Q5T200 1668 aaKnown RBP8.62□□□□□ -1.03
EPHA4-212ENST00000472696 IQGAP3Q86VI3 1631 aa8.62□□□□□ -1.03
EPHA4-212ENST00000472696 NUP155O75694 1391 aa8.61□□□□□ -1.03
EPHA4-212ENST00000472696 VWDEQ8N2E2 1590 aa8.61□□□□□ -1.03
EPHA4-212ENST00000472696 TRIM52Q96A61 297 aa8.61□□□□□ -1.03
EPHA4-212ENST00000472696 CNTLNQ9NXG0 1405 aa8.61□□□□□ -1.03
EPHA4-212ENST00000472696 RPRD2Q5VT52 1461 aaKnown RBP8.6□□□□□ -1.03
EPHA4-212ENST00000472696 MPHOSPH9Q99550 1183 aa8.6□□□□□ -1.03
EPHA4-212ENST00000472696 ARHGAP31Q2M1Z3 1444 aa8.6□□□□□ -1.03
EPHA4-212ENST00000472696 SLC4A1APQ9BWU0 796 aaKnown RBP8.59□□□□□ -1.03
EPHA4-212ENST00000472696 DHX57Q6P158 1386 aaKnown RBP8.59□□□□□ -1.03
EPHA4-212ENST00000472696 TET3O43151 1660 aa8.59□□□□□ -1.03
EPHA4-212ENST00000472696 MROH1Q8NDA8 1641 aa8.58□□□□□ -1.04
EPHA4-212ENST00000472696 WASHC2CQ9Y4E1 1318 aa8.58□□□□□ -1.04
EPHA4-212ENST00000472696 GGT6Q6P531 493 aa8.58□□□□□ -1.04
EPHA4-212ENST00000472696 ESF1Q9H501 851 aaKnown RBP8.58□□□□□ -1.04
EPHA4-212ENST00000472696 PZPP20742 1482 aa8.57□□□□□ -1.04
EPHA4-212ENST00000472696 TIMELESSQ9UNS1 1208 aa8.57□□□□□ -1.04
EPHA4-212ENST00000472696 ARID4BQ4LE39 1312 aaPredicted RBP8.56□□□□□ -1.04
EPHA4-212ENST00000472696 MROH2AA6NES4 1674 aa8.56□□□□□ -1.04
EPHA4-212ENST00000472696 ABCC3O15438 1527 aa8.55□□□□□ -1.04
EPHA4-212ENST00000472696 EFCAB6Q5THR3 1501 aa8.55□□□□□ -1.04
EPHA4-212ENST00000472696 CCER1Q8TC90 406 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-212ENST00000472696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.55□□□□□ -1.04
EPHA4-212ENST00000472696 ZEB1P37275 1124 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-212ENST00000472696 PKD2Q13563 968 aa8.54□□□□□ -1.04
EPHA4-212ENST00000472696 CAMSAP1Q5T5Y3 1602 aa8.54□□□□□ -1.04
EPHA4-212ENST00000472696 PTPRTO14522 1441 aa8.54□□□□□ -1.04
EPHA4-212ENST00000472696 ANKRD30BQ9BXX2 1392 aa8.53□□□□□ -1.04
EPHA4-212ENST00000472696 STAC3Q96MF2 364 aa8.53□□□□□ -1.04
EPHA4-212ENST00000472696 SLC52A1Q9NWF4 448 aa8.53□□□□□ -1.04
EPHA4-212ENST00000472696 SIGLEC1Q9BZZ2 1709 aa8.53□□□□□ -1.04
EPHA4-212ENST00000472696 E9PCH4 1651 aa8.53□□□□□ -1.04
EPHA4-212ENST00000472696 NEURL4Q96JN8 1562 aa8.52□□□□□ -1.04
EPHA4-212ENST00000472696 CEP152O94986 1710 aa8.52□□□□□ -1.05
EPHA4-212ENST00000472696 NPATQ14207 1427 aa8.52□□□□□ -1.05
EPHA4-212ENST00000472696 ADAMTSL3P82987 1691 aa8.52□□□□□ -1.05
EPHA4-212ENST00000472696 ZMYM3Q14202 1370 aa8.51□□□□□ -1.05
EPHA4-212ENST00000472696 FER1L4A9Z1Z3 1794 aa8.51□□□□□ -1.05
EPHA4-212ENST00000472696 CLTCQ00610 1675 aaKnown RBP8.51□□□□□ -1.05
EPHA4-212ENST00000472696 NOS1P29475 1434 aa8.51□□□□□ -1.05
EPHA4-212ENST00000472696 SPHKAPQ2M3C7 1700 aa8.51□□□□□ -1.05
EPHA4-212ENST00000472696 TRPM2O94759 1503 aa8.5□□□□□ -1.05
EPHA4-212ENST00000472696 CCDC144AA2RUR9 1427 aa8.5□□□□□ -1.05
EPHA4-212ENST00000472696 SPATA31D1Q6ZQQ2 1576 aa8.49□□□□□ -1.05
EPHA4-212ENST00000472696 MLECQ14165 292 aa8.49□□□□□ -1.05
EPHA4-212ENST00000472696 SETD1BQ9UPS6 1966 aaKnown RBP8.49□□□□□ -1.05
EPHA4-212ENST00000472696 KDM5AP29375 1690 aaKnown RBP8.48□□□□□ -1.05
EPHA4-212ENST00000472696 PREX1Q8TCU6 1659 aa8.48□□□□□ -1.05
EPHA4-212ENST00000472696 ERVK-7P63135 1459 aa8.47□□□□□ -1.05
EPHA4-212ENST00000472696 NLRP1Q9C000 1473 aa8.47□□□□□ -1.05
EPHA4-212ENST00000472696 PRKCSHP14314 528 aaPredicted RBP8.47□□□□□ -1.05
EPHA4-212ENST00000472696 PIK3C2BO00750 1634 aa8.47□□□□□ -1.05
EPHA4-212ENST00000472696 C3P01024 1663 aa8.46□□□□□ -1.05
EPHA4-212ENST00000472696 PLA2R1Q13018 1463 aa8.46□□□□□ -1.05
EPHA4-212ENST00000472696 KIF1BO60333 1816 aa8.46□□□□□ -1.06
EPHA4-212ENST00000472696 FOXD1Q16676 465 aa8.46□□□□□ -1.06
EPHA4-212ENST00000472696 RPGRIP1LQ68CZ1 1315 aa8.46□□□□□ -1.06
EPHA4-212ENST00000472696 MADDQ8WXG6 1647 aa8.46□□□□□ -1.06
EPHA4-212ENST00000472696 HDGFP51858 240 aaKnown RBP8.45□□□□□ -1.06
EPHA4-212ENST00000472696 TONSLQ96HA7 1378 aa8.45□□□□□ -1.06
EPHA4-212ENST00000472696 RIMS1Q86UR5 1692 aaKnown RBP8.44□□□□□ -1.06
EPHA4-212ENST00000472696 TNRQ92752 1358 aa8.44□□□□□ -1.06
EPHA4-212ENST00000472696 PTPRMP28827 1452 aa8.44□□□□□ -1.06
EPHA4-212ENST00000472696 SYNMO15061 1565 aa8.44□□□□□ -1.06
EPHA4-212ENST00000472696 SPATA31E1Q6ZUB1 1445 aa8.43□□□□□ -1.06
EPHA4-212ENST00000472696 CLTCL1P53675 1640 aa8.43□□□□□ -1.06
EPHA4-212ENST00000472696 CFAP65Q6ZU64 1925 aaKnown RBP8.42□□□□□ -1.06
EPHA4-212ENST00000472696 IDI1Q13907 227 aa8.42□□□□□ -1.06
EPHA4-212ENST00000472696 SIN3AQ96ST3 1273 aa8.42□□□□□ -1.06
EPHA4-212ENST00000472696 ADGRB3O60242 1522 aa8.41□□□□□ -1.06
EPHA4-212ENST00000472696 ZFYVE9O95405 1425 aa8.41□□□□□ -1.06
EPHA4-212ENST00000472696 NEUROD1Q13562 356 aa8.41□□□□□ -1.06
EPHA4-212ENST00000472696 FBXO31Q5XUX0 539 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-212ENST00000472696 THEMISQ8N1K5 641 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-212ENST00000472696 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.41□□□□□ -1.06
EPHA4-212ENST00000472696 ARXQ96QS3 562 aa8.41□□□□□ -1.06
EPHA4-212ENST00000472696 TMEM131LA2VDJ0 1609 aa8.4□□□□□ -1.06
EPHA4-212ENST00000472696 A2ML1A8K2U0 1454 aa8.4□□□□□ -1.06
EPHA4-212ENST00000472696 VGFO15240 615 aaPredicted RBP8.4□□□□□ -1.06
EPHA4-212ENST00000472696 STAG3Q9UJ98 1225 aa8.4□□□□□ -1.06
EPHA4-212ENST00000472696 KDM4FA0A1W2PPD8 638 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms