RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 MED14O60244 1454 aa9.92□□□□□ -0.82
SIK3-208ENST00000472648 ANKLE2Q86XL3 938 aa9.92□□□□□ -0.82
SIK3-208ENST00000472648 PHLPP1O60346 1717 aa9.92□□□□□ -0.82
SIK3-208ENST00000472648 GGT6Q6P531 493 aa9.91□□□□□ -0.82
SIK3-208ENST00000472648 FAM135AQ9P2D6 1515 aa9.91□□□□□ -0.82
SIK3-208ENST00000472648 TNRQ92752 1358 aa9.9□□□□□ -0.82
SIK3-208ENST00000472648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.9□□□□□ -0.82
SIK3-208ENST00000472648 SPAG9O60271 1321 aaKnown RBP9.9□□□□□ -0.82
SIK3-208ENST00000472648 CSRNP3Q8WYN3 585 aa9.9□□□□□ -0.82
SIK3-208ENST00000472648 SRCAPQ6ZRS2 3230 aa9.9□□□□□ -0.83
SIK3-208ENST00000472648 CFAP65Q6ZU64 1925 aaKnown RBP9.9□□□□□ -0.83
SIK3-208ENST00000472648 KDM5DQ9BY66 1539 aa9.88□□□□□ -0.83
SIK3-208ENST00000472648 PZPP20742 1482 aa9.88□□□□□ -0.83
SIK3-208ENST00000472648 NLRP1Q9C000 1473 aa9.88□□□□□ -0.83
SIK3-208ENST00000472648 THEMISQ8N1K5 641 aaPredicted RBP9.87□□□□□ -0.83
SIK3-208ENST00000472648 UPF1Q92900 1129 aaKnown RBP eCLIP9.87□□□□□ -0.83
SIK3-208ENST00000472648 UBR1Q8IWV7 1749 aa9.87□□□□□ -0.83
SIK3-208ENST00000472648 CCDC18Q5T9S5 1454 aa9.85□□□□□ -0.83
SIK3-208ENST00000472648 ZNF777Q9ULD5 760 aaPredicted RBP9.85□□□□□ -0.83
SIK3-208ENST00000472648 PLEKHH2Q8IVE3 1493 aa9.85□□□□□ -0.83
SIK3-208ENST00000472648 EEA1Q15075 1411 aa9.84□□□□□ -0.83
SIK3-208ENST00000472648 FAM135BQ49AJ0 1406 aa9.84□□□□□ -0.83
SIK3-208ENST00000472648 ARHGAP35Q9NRY4 1499 aa9.83□□□□□ -0.84
SIK3-208ENST00000472648 HNRNPMP52272 730 aaKnown RBP eCLIP9.82□□□□□ -0.84
SIK3-208ENST00000472648 FBXO31Q5XUX0 539 aaPredicted RBP9.82□□□□□ -0.84
SIK3-208ENST00000472648 TRIM52Q96A61 297 aa9.82□□□□□ -0.84
SIK3-208ENST00000472648 LRRC9Q6ZRR7 1453 aa9.82□□□□□ -0.84
SIK3-208ENST00000472648 MIA2Q96PC5 1412 aa9.81□□□□□ -0.84
SIK3-208ENST00000472648 KIAA1107Q9UPP5 1409 aa9.81□□□□□ -0.84
SIK3-208ENST00000472648 SHPRHQ149N8 1683 aa9.8□□□□□ -0.84
SIK3-208ENST00000472648 CEP152O94986 1710 aa9.8□□□□□ -0.84
SIK3-208ENST00000472648 COL16A1Q07092 1604 aaPredicted RBP9.8□□□□□ -0.84
SIK3-208ENST00000472648 SCAF11Q99590 1463 aaKnown RBP9.79□□□□□ -0.84
SIK3-208ENST00000472648 GPATCH8Q9UKJ3 1502 aaKnown RBP9.79□□□□□ -0.84
SIK3-208ENST00000472648 JCADQ9P266 1359 aa9.78□□□□□ -0.84
SIK3-208ENST00000472648 MEX3CQ5U5Q3 659 aaKnown RBP9.77□□□□□ -0.85
SIK3-208ENST00000472648 ZNF772Q68DY9 489 aaPredicted RBP9.77□□□□□ -0.85
SIK3-208ENST00000472648 CDK12Q9NYV4 1490 aaPredicted RBP9.77□□□□□ -0.85
SIK3-208ENST00000472648 WASHC2CQ9Y4E1 1318 aa9.77□□□□□ -0.85
SIK3-208ENST00000472648 MAP3K1Q13233 1512 aa9.77□□□□□ -0.85
SIK3-208ENST00000472648 TIAM1Q13009 1591 aa9.76□□□□□ -0.85
SIK3-208ENST00000472648 LRP6O75581 1613 aa9.76□□□□□ -0.85
SIK3-208ENST00000472648 DHX29Q7Z478 1369 aaKnown RBP9.75□□□□□ -0.85
SIK3-208ENST00000472648 KDM5AP29375 1690 aaKnown RBP9.75□□□□□ -0.85
SIK3-208ENST00000472648 KIF3BO15066 747 aa9.75□□□□□ -0.85
SIK3-208ENST00000472648 RTEL1-TNFRSF6BF6WH68 1400 aa9.74□□□□□ -0.85
SIK3-208ENST00000472648 CASKIN1Q8WXD9 1431 aa9.74□□□□□ -0.85
SIK3-208ENST00000472648 SLIT1O75093 1534 aa9.74□□□□□ -0.85
SIK3-208ENST00000472648 CFDP1Q9UEE9 299 aaPredicted RBP9.74□□□□□ -0.85
SIK3-208ENST00000472648 TMEM94Q12767 1356 aa9.74□□□□□ -0.85
SIK3-208ENST00000472648 ERVK-7P63135 1459 aa9.73□□□□□ -0.85
SIK3-208ENST00000472648 PIK3C2BO00750 1634 aa9.73□□□□□ -0.85
SIK3-208ENST00000472648 CCNB3Q8WWL7 1395 aa9.73□□□□□ -0.85
SIK3-208ENST00000472648 FYCO1Q9BQS8 1478 aa9.72□□□□□ -0.85
SIK3-208ENST00000472648 ARHGAP23Q9P227 1491 aa9.72□□□□□ -0.85
SIK3-208ENST00000472648 NWD1Q149M9 1564 aa9.72□□□□□ -0.85
SIK3-208ENST00000472648 EIF2AK4Q9P2K8 1649 aaKnown RBP9.72□□□□□ -0.85
SIK3-208ENST00000472648 UBTFP17480 764 aaKnown RBP9.72□□□□□ -0.85
SIK3-208ENST00000472648 RXRBP28702 533 aa9.72□□□□□ -0.85
SIK3-208ENST00000472648 CHIC1Q5VXU3 224 aa9.72□□□□□ -0.85
SIK3-208ENST00000472648 SPATA31A6Q5VVP1 1343 aa9.72□□□□□ -0.85
SIK3-208ENST00000472648 CHD2O14647 1828 aaKnown RBP9.72□□□□□ -0.85
SIK3-208ENST00000472648 FGD6Q6ZV73 1430 aa9.72□□□□□ -0.85
SIK3-208ENST00000472648 ABCC3O15438 1527 aa9.72□□□□□ -0.85
SIK3-208ENST00000472648 FOXD1Q16676 465 aa9.71□□□□□ -0.86
SIK3-208ENST00000472648 NKTRP30414 1462 aaKnown RBP9.71□□□□□ -0.86
SIK3-208ENST00000472648 PRDM15P57071 1507 aaPredicted RBP9.71□□□□□ -0.86
SIK3-208ENST00000472648 SETBP1Q9Y6X0 1596 aa9.71□□□□□ -0.86
SIK3-208ENST00000472648 MSH6P52701 1360 aa9.7□□□□□ -0.86
SIK3-208ENST00000472648 NCOA2Q15596 1464 aa9.7□□□□□ -0.86
SIK3-208ENST00000472648 AHDC1Q5TGY3 1603 aaPredicted RBP9.7□□□□□ -0.86
SIK3-208ENST00000472648 CCDC141Q6ZP82 1450 aa9.69□□□□□ -0.86
SIK3-208ENST00000472648 TXNDC2Q86VQ3 553 aa9.69□□□□□ -0.86
SIK3-208ENST00000472648 PROSER2Q86WR7 435 aaPredicted RBP9.69□□□□□ -0.86
SIK3-208ENST00000472648 EHMT2Q96KQ7 1210 aa9.69□□□□□ -0.86
SIK3-208ENST00000472648 EP400Q96L91 3159 aa9.69□□□□□ -0.86
SIK3-208ENST00000472648 MBD5Q9P267 1494 aa9.69□□□□□ -0.86
SIK3-208ENST00000472648 EID1Q9Y6B2 187 aa9.69□□□□□ -0.86
SIK3-208ENST00000472648 RGS12O14924 1447 aa9.68□□□□□ -0.86
SIK3-208ENST00000472648 ZRANB1Q9UGI0 708 aa9.68□□□□□ -0.86
SIK3-208ENST00000472648 LTKP29376 864 aa9.67□□□□□ -0.86
SIK3-208ENST00000472648 SLAIN2Q9P270 581 aa9.67□□□□□ -0.86
SIK3-208ENST00000472648 MYO5BQ9ULV0 1848 aa9.67□□□□□ -0.86
SIK3-208ENST00000472648 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.67□□□□□ -0.86
SIK3-208ENST00000472648 LRP5O75197 1615 aa9.67□□□□□ -0.86
SIK3-208ENST00000472648 MROH1Q8NDA8 1641 aa9.67□□□□□ -0.86
SIK3-208ENST00000472648 CAMSAP2Q08AD1 1489 aa9.66□□□□□ -0.86
SIK3-208ENST00000472648 NUTM2BA6NNL0 878 aaPredicted RBP9.66□□□□□ -0.86
SIK3-208ENST00000472648 NUTM2EB1AL46 878 aaPredicted RBP9.66□□□□□ -0.86
SIK3-208ENST00000472648 NUTM2DQ5VT03 806 aaPredicted RBP9.66□□□□□ -0.86
SIK3-208ENST00000472648 NUTM2AQ8IVF1 878 aaPredicted RBP9.66□□□□□ -0.86
SIK3-208ENST00000472648 RBM33Q96EV2 1170 aaKnown RBP9.66□□□□□ -0.86
SIK3-208ENST00000472648 DIP2AQ14689 1571 aa9.66□□□□□ -0.86
SIK3-208ENST00000472648 TET3O43151 1660 aa9.65□□□□□ -0.86
SIK3-208ENST00000472648 ZNF644Q9H582 1327 aaPredicted RBP9.65□□□□□ -0.86
SIK3-208ENST00000472648 KCNA6P17658 529 aa9.65□□□□□ -0.86
SIK3-208ENST00000472648 ATAD2Q6PL18 1390 aa9.64□□□□□ -0.87
SIK3-208ENST00000472648 AFF2P51816 1311 aa9.64□□□□□ -0.87
SIK3-208ENST00000472648 EFCAB6Q5THR3 1501 aa9.64□□□□□ -0.87
SIK3-208ENST00000472648 NHSL1Q5SYE7 1610 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms