RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 BAZ1AQ9NRL2 1556 aaPredicted RBP6.79□□□□□ -1.32
XRN1-209ENST00000472625 KCNV2Q8TDN2 545 aa6.79□□□□□ -1.32
XRN1-209ENST00000472625 FOSBP53539 338 aa6.78□□□□□ -1.32
XRN1-209ENST00000472625 SMARCA4P51532 1647 aa6.77□□□□□ -1.33
XRN1-209ENST00000472625 DPYSL4O14531 572 aa6.77□□□□□ -1.33
XRN1-209ENST00000472625 HAP1P54257 671 aaPredicted RBP6.77□□□□□ -1.33
XRN1-209ENST00000472625 E2F4Q16254 413 aa6.77□□□□□ -1.33
XRN1-209ENST00000472625 ADAM33Q9BZ11 813 aa6.77□□□□□ -1.33
XRN1-209ENST00000472625 BAZ1BQ9UIG0 1483 aaKnown RBP6.77□□□□□ -1.33
XRN1-209ENST00000472625 PTGER2P43116 358 aa6.76□□□□□ -1.33
XRN1-209ENST00000472625 PEG3Q9GZU2 1588 aa6.75□□□□□ -1.33
XRN1-209ENST00000472625 PDIA6Q15084 440 aa6.75□□□□□ -1.33
XRN1-209ENST00000472625 JPH4Q96JJ6 628 aa6.75□□□□□ -1.33
XRN1-209ENST00000472625 PRIM1P49642 420 aaKnown RBP6.74□□□□□ -1.33
XRN1-209ENST00000472625 BCL2L12Q9HB09 334 aa6.74□□□□□ -1.33
XRN1-209ENST00000472625 HRO43593 1189 aa6.73□□□□□ -1.33
XRN1-209ENST00000472625 ZDHHC16Q969W1 377 aa6.73□□□□□ -1.33
XRN1-209ENST00000472625 PCDHGA10Q9Y5H3 936 aa6.73□□□□□ -1.33
XRN1-209ENST00000472625 LAMC3Q9Y6N6 1575 aa6.73□□□□□ -1.33
XRN1-209ENST00000472625 TK2O00142 265 aa6.72□□□□□ -1.33
XRN1-209ENST00000472625 PTPREP23469 700 aa6.72□□□□□ -1.33
XRN1-209ENST00000472625 KCTD12Q96CX2 325 aaKnown RBP6.72□□□□□ -1.33
XRN1-209ENST00000472625 KCNH8Q96L42 1107 aa6.72□□□□□ -1.33
XRN1-209ENST00000472625 VPS9D1Q9Y2B5 631 aa6.72□□□□□ -1.33
XRN1-209ENST00000472625 PDS5BQ9NTI5 1447 aa6.72□□□□□ -1.33
XRN1-209ENST00000472625 VSIG10Q8N0Z9 540 aa6.71□□□□□ -1.34
XRN1-209ENST00000472625 COL9A1P20849 921 aa6.7□□□□□ -1.34
XRN1-209ENST00000472625 DDX12PQ92771 950 aa6.7□□□□□ -1.34
XRN1-209ENST00000472625 RBM33Q96EV2 1170 aaKnown RBP6.7□□□□□ -1.34
XRN1-209ENST00000472625 ZBED2Q9BTP6 218 aa6.7□□□□□ -1.34
XRN1-209ENST00000472625 PROX2Q3B8N5 592 aa6.69□□□□□ -1.34
XRN1-209ENST00000472625 ARHGEF1Q92888 912 aaKnown RBP6.69□□□□□ -1.34
XRN1-209ENST00000472625 WDR70Q9NW82 654 aa6.69□□□□□ -1.34
XRN1-209ENST00000472625 STAC3Q96MF2 364 aa6.68□□□□□ -1.34
XRN1-209ENST00000472625 THOC2Q8NI27 1593 aaKnown RBP6.67□□□□□ -1.34
XRN1-209ENST00000472625 PHF14O94880 888 aa6.67□□□□□ -1.34
XRN1-209ENST00000472625 MLLT3P42568 568 aaPredicted RBP6.67□□□□□ -1.34
XRN1-209ENST00000472625 TYW1BQ6NUM6 668 aa6.67□□□□□ -1.34
XRN1-209ENST00000472625 NESP48681 1621 aa6.66□□□□□ -1.34
XRN1-209ENST00000472625 OSBPP22059 807 aa6.66□□□□□ -1.34
XRN1-209ENST00000472625 SPDYE16A6NNV3 312 aaPredicted RBP6.65□□□□□ -1.34
XRN1-209ENST00000472625 PPP1R3GB7ZBB8 358 aa6.65□□□□□ -1.34
XRN1-209ENST00000472625 PTPN5P54829 565 aa6.65□□□□□ -1.34
XRN1-209ENST00000472625 NBR1Q14596 966 aa6.65□□□□□ -1.34
XRN1-209ENST00000472625 BHMG1C9JSJ3 638 aaPredicted RBP6.64□□□□□ -1.35
XRN1-209ENST00000472625 SEMA3EO15041 775 aa6.64□□□□□ -1.35
XRN1-209ENST00000472625 SLC4A5Q9BY07 1137 aa6.64□□□□□ -1.35
XRN1-209ENST00000472625 HCSTQ9UBK5 93 aa6.64□□□□□ -1.35
XRN1-209ENST00000472625 CADPSQ9ULU8 1353 aa6.64□□□□□ -1.35
XRN1-209ENST00000472625 TSR1Q2NL82 804 aaKnown RBP6.63□□□□□ -1.35
XRN1-209ENST00000472625 C6orf132Q5T0Z8 1188 aa6.63□□□□□ -1.35
XRN1-209ENST00000472625 MROH2BQ7Z745 1585 aa6.63□□□□□ -1.35
XRN1-209ENST00000472625 FBXW7Q969H0 707 aa6.63□□□□□ -1.35
XRN1-209ENST00000472625 MRC2Q9UBG0 1479 aa6.63□□□□□ -1.35
XRN1-209ENST00000472625 MRPL50Q8N5N7 158 aaKnown RBP6.62□□□□□ -1.35
XRN1-209ENST00000472625 EPAS1Q99814 870 aa6.62□□□□□ -1.35
XRN1-209ENST00000472625 WDR62O43379 1518 aa6.61□□□□□ -1.35
XRN1-209ENST00000472625 TESPA1A2RU30 521 aaPredicted RBP6.61□□□□□ -1.35
XRN1-209ENST00000472625 GRXCR2A6NFK2 248 aa6.61□□□□□ -1.35
XRN1-209ENST00000472625 GOLGA8CPA6NN73 597 aa6.61□□□□□ -1.35
XRN1-209ENST00000472625 MAP3K7O43318 606 aa6.61□□□□□ -1.35
XRN1-209ENST00000472625 EN1Q05925 392 aaPredicted RBP6.61□□□□□ -1.35
XRN1-209ENST00000472625 P3H3Q8IVL6 736 aa6.61□□□□□ -1.35
XRN1-209ENST00000472625 WNT2BQ93097 391 aa6.61□□□□□ -1.35
XRN1-209ENST00000472625 PLA2G2EQ9NZK7 142 aa6.61□□□□□ -1.35
XRN1-209ENST00000472625 SEPT9Q9UHD8 586 aaPredicted RBP6.61□□□□□ -1.35
XRN1-209ENST00000472625 THSD4Q6ZMP0 1018 aa6.6□□□□□ -1.35
XRN1-209ENST00000472625 NPDC1Q9NQX5 325 aaPredicted RBP6.6□□□□□ -1.35
XRN1-209ENST00000472625 KIAA1468Q9P260 1216 aa6.6□□□□□ -1.35
XRN1-209ENST00000472625 CEP164Q9UPV0 1460 aa6.6□□□□□ -1.35
XRN1-209ENST00000472625 KIF21AQ7Z4S6 1674 aa6.59□□□□□ -1.35
XRN1-209ENST00000472625 NBPF3Q9H094 633 aa6.59□□□□□ -1.35
XRN1-209ENST00000472625 CDHR5Q9HBB8 845 aa6.59□□□□□ -1.35
XRN1-209ENST00000472625 C3orf80F5H4A9 247 aa6.58□□□□□ -1.36
XRN1-209ENST00000472625 BCAMP50895 628 aa6.58□□□□□ -1.36
XRN1-209ENST00000472625 RABGEF1Q9UJ41 708 aa6.58□□□□□ -1.36
XRN1-209ENST00000472625 TRIM6-TRIM34B2RNG4 842 aa6.57□□□□□ -1.36
XRN1-209ENST00000472625 GPR37O15354 613 aa6.57□□□□□ -1.36
XRN1-209ENST00000472625 FAM198AQ9UFP1 575 aa6.57□□□□□ -1.36
XRN1-209ENST00000472625 FANCD2Q9BXW9 1451 aa6.56□□□□□ -1.36
XRN1-209ENST00000472625 TSKSQ9UJT2 592 aa6.56□□□□□ -1.36
XRN1-209ENST00000472625 CFTRP13569 1480 aa6.55□□□□□ -1.36
XRN1-209ENST00000472625 SMAPO00193 183 aa6.55□□□□□ -1.36
XRN1-209ENST00000472625 SLC24A1O60721 1099 aa6.54□□□□□ -1.36
XRN1-209ENST00000472625 TTC13Q8NBP0 860 aa6.54□□□□□ -1.36
XRN1-209ENST00000472625 ANKK1Q8NFD2 765 aa6.54□□□□□ -1.36
XRN1-209ENST00000472625 TOP2AP11388 1531 aaKnown RBP6.54□□□□□ -1.36
XRN1-209ENST00000472625 RBM26Q5T8P6 1007 aaKnown RBP6.53□□□□□ -1.36
XRN1-209ENST00000472625 ZFRQ96KR1 1074 aaKnown RBP6.53□□□□□ -1.36
XRN1-209ENST00000472625 WIZO95785 1651 aa6.52□□□□□ -1.37
XRN1-209ENST00000472625 CDCA7LQ96GN5 454 aa6.52□□□□□ -1.37
XRN1-209ENST00000472625 PTGDRQ13258 359 aa6.51□□□□□ -1.37
XRN1-209ENST00000472625 RSF1Q96T23 1441 aaPredicted RBP6.5□□□□□ -1.37
XRN1-209ENST00000472625 SOWAHBA6NEL2 793 aa6.5□□□□□ -1.37
XRN1-209ENST00000472625 PRSS12P56730 875 aa6.5□□□□□ -1.37
XRN1-209ENST00000472625 FAM98CQ17RN3 349 aaKnown RBP6.5□□□□□ -1.37
XRN1-209ENST00000472625 LAPTM4BQ86VI4 370 aa6.5□□□□□ -1.37
XRN1-209ENST00000472625 WBP1LQ9NX94 342 aa6.5□□□□□ -1.37
XRN1-209ENST00000472625 ONECUT3O60422 494 aaPredicted RBP6.49□□□□□ -1.37
XRN1-209ENST00000472625 PNMA3Q9UL41 463 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms