RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 NCKAP5LQ9HCH0 1330 aa26.47■■□□□ 1.83
PKD1-208ENST00000472577 IQSEC2Q5JU85 1478 aa26.47■■□□□ 1.83
PKD1-208ENST00000472577 PLA2R1Q13018 1463 aa26.46■■□□□ 1.83
PKD1-208ENST00000472577 DNMT1P26358 1616 aaKnown RBP26.45■■□□□ 1.82
PKD1-208ENST00000472577 RTEL1-TNFRSF6BF6WH68 1400 aa26.45■■□□□ 1.82
PKD1-208ENST00000472577 FAM50AQ14320 339 aaKnown RBP26.44■■□□□ 1.82
PKD1-208ENST00000472577 ABCC5O15440 1437 aa26.44■■□□□ 1.82
PKD1-208ENST00000472577 DISP3Q9P2K9 1392 aa26.44■■□□□ 1.82
PKD1-208ENST00000472577 ZNF335Q9H4Z2 1342 aaPredicted RBP26.42■■□□□ 1.82
PKD1-208ENST00000472577 DAPK1P53355 1430 aa26.42■■□□□ 1.82
PKD1-208ENST00000472577 CROCC2H7BZ55 1655 aa26.42■■□□□ 1.82
PKD1-208ENST00000472577 MAST1Q9Y2H9 1570 aa26.41■■□□□ 1.82
PKD1-208ENST00000472577 TSPY4P0CV99 314 aa26.41■■□□□ 1.82
PKD1-208ENST00000472577 TSPY10P0CW01 314 aa26.41■■□□□ 1.82
PKD1-208ENST00000472577 ILDR2Q71H61 639 aa26.4■■□□□ 1.82
PKD1-208ENST00000472577 SPATA31D1Q6ZQQ2 1576 aa26.4■■□□□ 1.82
PKD1-208ENST00000472577 DHX29Q7Z478 1369 aaKnown RBP26.38■■□□□ 1.81
PKD1-208ENST00000472577 RRBP1Q9P2E9 1410 aaKnown RBP26.38■■□□□ 1.81
PKD1-208ENST00000472577 SHANK2Q9UPX8 1470 aa26.37■■□□□ 1.81
PKD1-208ENST00000472577 A2ML1A8K2U0 1454 aa26.36■■□□□ 1.81
PKD1-208ENST00000472577 PPP6R1Q9UPN7 881 aa26.35■■□□□ 1.81
PKD1-208ENST00000472577 PKD2Q13563 968 aa26.34■■□□□ 1.81
PKD1-208ENST00000472577 KDM5DQ9BY66 1539 aa26.34■■□□□ 1.81
PKD1-208ENST00000472577 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.33■■□□□ 1.81
PKD1-208ENST00000472577 NEURL4Q96JN8 1562 aa26.31■■□□□ 1.8
PKD1-208ENST00000472577 PZPP20742 1482 aa26.3■■□□□ 1.8
PKD1-208ENST00000472577 KIF3BO15066 747 aa26.3■■□□□ 1.8
PKD1-208ENST00000472577 FBXO31Q5XUX0 539 aaPredicted RBP26.3■■□□□ 1.8
PKD1-208ENST00000472577 POLR1AO95602 1720 aaPredicted RBP26.3■■□□□ 1.8
PKD1-208ENST00000472577 FAM135AQ9P2D6 1515 aa26.29■■□□□ 1.8
PKD1-208ENST00000472577 CHIC2Q9UKJ5 165 aa26.28■■□□□ 1.8
PKD1-208ENST00000472577 TNRQ92752 1358 aa26.28■■□□□ 1.8
PKD1-208ENST00000472577 ADGRL2O95490 1459 aa26.24■■□□□ 1.79
PKD1-208ENST00000472577 UBAP1LF5GYI3 381 aa26.23■■□□□ 1.79
PKD1-208ENST00000472577 ITGAEP38570 1179 aa26.23■■□□□ 1.79
PKD1-208ENST00000472577 ANKRD30AQ9BXX3 1397 aa26.22■■□□□ 1.79
PKD1-208ENST00000472577 KIF15Q9NS87 1388 aa26.22■■□□□ 1.79
PKD1-208ENST00000472577 RRP7BPQ9NSQ0 103 aa26.22■■□□□ 1.79
PKD1-208ENST00000472577 RNF17Q9BXT8 1623 aaKnown RBP26.21■■□□□ 1.79
PKD1-208ENST00000472577 DUOX2Q9NRD8 1548 aa26.2■■□□□ 1.79
PKD1-208ENST00000472577 WASHC2CQ9Y4E1 1318 aa26.19■■□□□ 1.78
PKD1-208ENST00000472577 SOCS7O14512 581 aa26.17■■□□□ 1.78
PKD1-208ENST00000472577 ABCC3O15438 1527 aa26.16■■□□□ 1.78
PKD1-208ENST00000472577 MROH1Q8NDA8 1641 aa26.15■■□□□ 1.78
PKD1-208ENST00000472577 NLRP1Q9C000 1473 aa26.15■■□□□ 1.78
PKD1-208ENST00000472577 UGGT1Q9NYU2 1555 aa26.15■■□□□ 1.78
PKD1-208ENST00000472577 EIF2AK4Q9P2K8 1649 aaKnown RBP26.14■■□□□ 1.78
PKD1-208ENST00000472577 ROCK1Q13464 1354 aa26.14■■□□□ 1.78
PKD1-208ENST00000472577 VWDEQ8N2E2 1590 aa26.14■■□□□ 1.78
PKD1-208ENST00000472577 CPS1P31327 1500 aa26.14■■□□□ 1.77
PKD1-208ENST00000472577 ZC3H13Q5T200 1668 aaKnown RBP26.13■■□□□ 1.77
PKD1-208ENST00000472577 ERBINQ96RT1 1412 aa26.13■■□□□ 1.77
PKD1-208ENST00000472577 DEPDC5O75140 1603 aa26.11■■□□□ 1.77
PKD1-208ENST00000472577 CEP152O94986 1710 aa26.09■■□□□ 1.77
PKD1-208ENST00000472577 MED14O60244 1454 aa26.08■■□□□ 1.77
PKD1-208ENST00000472577 NPHP4O75161 1426 aaPredicted RBP26.07■■□□□ 1.76
PKD1-208ENST00000472577 IQGAP1P46940 1657 aa26.07■■□□□ 1.76
PKD1-208ENST00000472577 ERVK-7P63135 1459 aa26.07■■□□□ 1.76
PKD1-208ENST00000472577 ANKLE2Q86XL3 938 aa26.06■■□□□ 1.76
PKD1-208ENST00000472577 ALKQ9UM73 1620 aa26.06■■□□□ 1.76
PKD1-208ENST00000472577 ANKRD50Q9ULJ7 1429 aa26.05■■□□□ 1.76
PKD1-208ENST00000472577 THEMISQ8N1K5 641 aaPredicted RBP26.04■■□□□ 1.76
PKD1-208ENST00000472577 STRCP1A6NGW2 1772 aa26.03■■□□□ 1.76
PKD1-208ENST00000472577 PIP4K2BP78356 416 aa26.02■■□□□ 1.76
PKD1-208ENST00000472577 SCAF1Q9H7N4 1312 aaKnown RBP26.02■■□□□ 1.76
PKD1-208ENST00000472577 HSPA1LP34931 641 aa26.01■■□□□ 1.75
PKD1-208ENST00000472577 UBR1Q8IWV7 1749 aa26■■□□□ 1.75
PKD1-208ENST00000472577 MED1Q15648 1581 aaPredicted RBP25.99■■□□□ 1.75
PKD1-208ENST00000472577 PRDM15P57071 1507 aaPredicted RBP25.99■■□□□ 1.75
PKD1-208ENST00000472577 NAIPQ13075 1403 aa25.97■■□□□ 1.75
PKD1-208ENST00000472577 GCC2Q8IWJ2 1684 aa25.97■■□□□ 1.75
PKD1-208ENST00000472577 CFAP65Q6ZU64 1925 aaKnown RBP25.96■■□□□ 1.75
PKD1-208ENST00000472577 TOM1O60784 492 aa25.95■■□□□ 1.74
PKD1-208ENST00000472577 HFM1A2PYH4 1435 aa25.95■■□□□ 1.74
PKD1-208ENST00000472577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.94■■□□□ 1.74
PKD1-208ENST00000472577 SYNMO15061 1565 aa25.94■■□□□ 1.74
PKD1-208ENST00000472577 LRRC7Q96NW7 1537 aa25.93■■□□□ 1.74
PKD1-208ENST00000472577 UNC13BO14795 1591 aa25.92■■□□□ 1.74
PKD1-208ENST00000472577 SCAF11Q99590 1463 aaKnown RBP25.9■■□□□ 1.74
PKD1-208ENST00000472577 ARHGAP23Q9P227 1491 aa25.89■■□□□ 1.73
PKD1-208ENST00000472577 KANK1Q14678 1352 aa25.88■■□□□ 1.73
PKD1-208ENST00000472577 SLIT1O75093 1534 aa25.88■■□□□ 1.73
PKD1-208ENST00000472577 ARHGAP31Q2M1Z3 1444 aa25.87■■□□□ 1.73
PKD1-208ENST00000472577 PIK3C2BO00750 1634 aa25.86■■□□□ 1.73
PKD1-208ENST00000472577 LMTK2Q8IWU2 1503 aa25.84■■□□□ 1.73
PKD1-208ENST00000472577 LTKP29376 864 aa25.84■■□□□ 1.73
PKD1-208ENST00000472577 XIRP1Q702N8 1843 aaKnown RBP25.81■■□□□ 1.72
PKD1-208ENST00000472577 IQGAP3Q86VI3 1631 aa25.81■■□□□ 1.72
PKD1-208ENST00000472577 NUP155O75694 1391 aa25.8■■□□□ 1.72
PKD1-208ENST00000472577 SENP3Q9H4L4 574 aaPredicted RBP25.79■■□□□ 1.72
PKD1-208ENST00000472577 EFCAB6Q5THR3 1501 aa25.78■■□□□ 1.72
PKD1-208ENST00000472577 SETD5Q9C0A6 1442 aa25.77■■□□□ 1.72
PKD1-208ENST00000472577 TET3O43151 1660 aa25.77■■□□□ 1.72
PKD1-208ENST00000472577 TXNDC2Q86VQ3 553 aa25.76■■□□□ 1.71
PKD1-208ENST00000472577 TMEM2Q9UHN6 1383 aa25.74■■□□□ 1.71
PKD1-208ENST00000472577 KDM5AP29375 1690 aaKnown RBP25.74■■□□□ 1.71
PKD1-208ENST00000472577 RAB3GAP2Q9H2M9 1393 aa25.7■■□□□ 1.71
PKD1-208ENST00000472577 TRIM52Q96A61 297 aa25.7■■□□□ 1.7
PKD1-208ENST00000472577 E9PCH4 1651 aa25.69■■□□□ 1.7
PKD1-208ENST00000472577 EID1Q9Y6B2 187 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms