RNA–Protein interactions for RNA: ENST00000472518.1

RTKN-207, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 1,105 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-207ENST00000472518 TSPY10P0CW01 314 aa22.1■■□□□ 1.13
RTKN-207ENST00000472518 MAST1Q9Y2H9 1570 aa22.08■■□□□ 1.13
RTKN-207ENST00000472518 PTPRKQ15262 1439 aa22.08■■□□□ 1.13
RTKN-207ENST00000472518 MYO3AQ8NEV4 1616 aa22.08■■□□□ 1.13
RTKN-207ENST00000472518 ZNF335Q9H4Z2 1342 aaPredicted RBP22.07■■□□□ 1.12
RTKN-207ENST00000472518 NCKAP5LQ9HCH0 1330 aa22.06■■□□□ 1.12
RTKN-207ENST00000472518 MYOM3Q5VTT5 1437 aa22.06■■□□□ 1.12
RTKN-207ENST00000472518 KDM5DQ9BY66 1539 aa22.06■■□□□ 1.12
RTKN-207ENST00000472518 PLA2R1Q13018 1463 aa22.05■■□□□ 1.12
RTKN-207ENST00000472518 CEP170BQ9Y4F5 1589 aaPredicted RBP22.04■■□□□ 1.12
RTKN-207ENST00000472518 APLP2Q06481 763 aa22.03■■□□□ 1.12
RTKN-207ENST00000472518 KIF3BO15066 747 aa22.02■■□□□ 1.12
RTKN-207ENST00000472518 EIF2AK4Q9P2K8 1649 aaKnown RBP22.01■■□□□ 1.11
RTKN-207ENST00000472518 TCOF1Q13428 1488 aaKnown RBP22.01■■□□□ 1.11
RTKN-207ENST00000472518 PZPP20742 1482 aa22■■□□□ 1.11
RTKN-207ENST00000472518 PKD2Q13563 968 aa21.99■■□□□ 1.11
RTKN-207ENST00000472518 KANK4Q5T7N3 995 aaPredicted RBP21.99■■□□□ 1.11
RTKN-207ENST00000472518 RNF17Q9BXT8 1623 aaKnown RBP21.98■■□□□ 1.11
RTKN-207ENST00000472518 ZC3H13Q5T200 1668 aaKnown RBP21.98■■□□□ 1.11
RTKN-207ENST00000472518 A2ML1A8K2U0 1454 aa21.98■■□□□ 1.11
RTKN-207ENST00000472518 UBAP1LF5GYI3 381 aa21.96■■□□□ 1.11
RTKN-207ENST00000472518 WASHC2CQ9Y4E1 1318 aa21.96■■□□□ 1.11
RTKN-207ENST00000472518 SHANK2Q9UPX8 1470 aa21.96■■□□□ 1.11
RTKN-207ENST00000472518 TNRQ92752 1358 aa21.94■■□□□ 1.1
RTKN-207ENST00000472518 DUOX2Q9NRD8 1548 aa21.93■■□□□ 1.1
RTKN-207ENST00000472518 DNMT1P26358 1616 aaKnown RBP21.92■■□□□ 1.1
RTKN-207ENST00000472518 NLRP1Q9C000 1473 aa21.91■■□□□ 1.1
RTKN-207ENST00000472518 CROCC2H7BZ55 1655 aa21.91■■□□□ 1.1
RTKN-207ENST00000472518 PTPN23Q9H3S7 1636 aa21.91■■□□□ 1.1
RTKN-207ENST00000472518 ABCC3O15438 1527 aa21.88■■□□□ 1.09
RTKN-207ENST00000472518 NEURL4Q96JN8 1562 aa21.87■■□□□ 1.09
RTKN-207ENST00000472518 POLR1AO95602 1720 aaPredicted RBP21.87■■□□□ 1.09
RTKN-207ENST00000472518 ERBINQ96RT1 1412 aa21.87■■□□□ 1.09
RTKN-207ENST00000472518 FGD6Q6ZV73 1430 aa21.86■■□□□ 1.09
RTKN-207ENST00000472518 KIF15Q9NS87 1388 aa21.84■■□□□ 1.09
RTKN-207ENST00000472518 MROH1Q8NDA8 1641 aa21.84■■□□□ 1.09
RTKN-207ENST00000472518 MED1Q15648 1581 aaPredicted RBP21.83■■□□□ 1.09
RTKN-207ENST00000472518 ABCC5O15440 1437 aa21.83■■□□□ 1.09
RTKN-207ENST00000472518 DAPK1P53355 1430 aa21.82■■□□□ 1.08
RTKN-207ENST00000472518 PRDM15P57071 1507 aaPredicted RBP21.82■■□□□ 1.08
RTKN-207ENST00000472518 HSPA1LP34931 641 aa21.82■■□□□ 1.08
RTKN-207ENST00000472518 FBXO31Q5XUX0 539 aaPredicted RBP21.82■■□□□ 1.08
RTKN-207ENST00000472518 THEMISQ8N1K5 641 aaPredicted RBP21.82■■□□□ 1.08
RTKN-207ENST00000472518 UGGT1Q9NYU2 1555 aa21.82■■□□□ 1.08
RTKN-207ENST00000472518 ALKQ9UM73 1620 aa21.8■■□□□ 1.08
RTKN-207ENST00000472518 DEPDC5O75140 1603 aa21.79■■□□□ 1.08
RTKN-207ENST00000472518 ARHGAP31Q2M1Z3 1444 aa21.79■■□□□ 1.08
RTKN-207ENST00000472518 ERVK-7P63135 1459 aa21.78■■□□□ 1.08
RTKN-207ENST00000472518 CEP152O94986 1710 aa21.78■■□□□ 1.08
RTKN-207ENST00000472518 ANKRD30AQ9BXX3 1397 aa21.77■■□□□ 1.08
RTKN-207ENST00000472518 ANKLE2Q86XL3 938 aa21.77■■□□□ 1.08
RTKN-207ENST00000472518 VWDEQ8N2E2 1590 aa21.77■■□□□ 1.08
RTKN-207ENST00000472518 MED14O60244 1454 aa21.76■■□□□ 1.07
RTKN-207ENST00000472518 PIP4K2BP78356 416 aa21.75■■□□□ 1.07
RTKN-207ENST00000472518 CPS1P31327 1500 aa21.75■■□□□ 1.07
RTKN-207ENST00000472518 KANK1Q14678 1352 aa21.74■■□□□ 1.07
RTKN-207ENST00000472518 SCAF1Q9H7N4 1312 aaKnown RBP21.73■■□□□ 1.07
RTKN-207ENST00000472518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.73■■□□□ 1.07
RTKN-207ENST00000472518 ADGRL2O95490 1459 aa21.72■■□□□ 1.07
RTKN-207ENST00000472518 RRP7BPQ9NSQ0 103 aa21.72■■□□□ 1.07
RTKN-207ENST00000472518 CFAP65Q6ZU64 1925 aaKnown RBP21.7■■□□□ 1.07
RTKN-207ENST00000472518 LMTK2Q8IWU2 1503 aa21.7■■□□□ 1.07
RTKN-207ENST00000472518 NPHP4O75161 1426 aaPredicted RBP21.69■■□□□ 1.06
RTKN-207ENST00000472518 IQGAP1P46940 1657 aa21.69■■□□□ 1.06
RTKN-207ENST00000472518 UBR1Q8IWV7 1749 aa21.68■■□□□ 1.06
RTKN-207ENST00000472518 STRCP1A6NGW2 1772 aa21.66■■□□□ 1.06
RTKN-207ENST00000472518 KDM5AP29375 1690 aaKnown RBP21.66■■□□□ 1.06
RTKN-207ENST00000472518 TOM1O60784 492 aa21.64■■□□□ 1.05
RTKN-207ENST00000472518 SLIT1O75093 1534 aa21.63■■□□□ 1.05
RTKN-207ENST00000472518 CHIC2Q9UKJ5 165 aa21.62■■□□□ 1.05
RTKN-207ENST00000472518 ARHGAP23Q9P227 1491 aa21.62■■□□□ 1.05
RTKN-207ENST00000472518 SCAF11Q99590 1463 aaKnown RBP21.61■■□□□ 1.05
RTKN-207ENST00000472518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.61■■□□□ 1.059e-7■■□□□ 13
RTKN-207ENST00000472518 EFCAB6Q5THR3 1501 aa21.6■■□□□ 1.05
RTKN-207ENST00000472518 FAM50AQ14320 339 aaKnown RBP21.6■■□□□ 1.05
RTKN-207ENST00000472518 ANKRD50Q9ULJ7 1429 aa21.6■■□□□ 1.05
RTKN-207ENST00000472518 RPRD2Q5VT52 1461 aaKnown RBP21.59■■□□□ 1.05
RTKN-207ENST00000472518 SYNMO15061 1565 aa21.59■■□□□ 1.05
RTKN-207ENST00000472518 LRRC7Q96NW7 1537 aa21.59■■□□□ 1.05
RTKN-207ENST00000472518 PIK3C2BO00750 1634 aa21.57■■□□□ 1.04
RTKN-207ENST00000472518 SENP3Q9H4L4 574 aaPredicted RBP21.56■■□□□ 1.04
RTKN-207ENST00000472518 EID1Q9Y6B2 187 aa21.56■■□□□ 1.04
RTKN-207ENST00000472518 ROCK1Q13464 1354 aa21.55■■□□□ 1.04
RTKN-207ENST00000472518 NOS1P29475 1434 aa21.55■■□□□ 1.04
RTKN-207ENST00000472518 TMEM2Q9UHN6 1383 aa21.53■■□□□ 1.04
RTKN-207ENST00000472518 SLC52A1Q9NWF4 448 aa21.53■■□□□ 1.04
RTKN-207ENST00000472518 STAG3Q9UJ98 1225 aa21.53■■□□□ 1.04
RTKN-207ENST00000472518 TET3O43151 1660 aa21.53■■□□□ 1.04
RTKN-207ENST00000472518 GCC2Q8IWJ2 1684 aa21.51■■□□□ 1.03
RTKN-207ENST00000472518 TXNDC2Q86VQ3 553 aa21.51■■□□□ 1.03
RTKN-207ENST00000472518 UNC13BO14795 1591 aa21.51■■□□□ 1.03
RTKN-207ENST00000472518 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
RTKN-207ENST00000472518 ADGRB3O60242 1522 aa21.5■■□□□ 1.03
RTKN-207ENST00000472518 RGS17Q9UGC6 210 aaPredicted RBP21.48■■□□□ 1.03
RTKN-207ENST00000472518 LTKP29376 864 aa21.47■■□□□ 1.03
RTKN-207ENST00000472518 IDI1Q13907 227 aa21.47■■□□□ 1.03
RTKN-207ENST00000472518 XIRP1Q702N8 1843 aaKnown RBP21.45■■□□□ 1.03
RTKN-207ENST00000472518 IQGAP3Q86VI3 1631 aa21.43■■□□□ 1.02
RTKN-207ENST00000472518 HDGFP51858 240 aaKnown RBP21.41■■□□□ 1.02
RTKN-207ENST00000472518 E9PCH4 1651 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms