RNA–Protein interactions for RNA: ENST00000472219.5

SNX21-209, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-209ENST00000472219 UHRF1BP1LA0JNW5 1464 aa28.45■■■□□ 2.14
SNX21-209ENST00000472219 DUOX2Q9NRD8 1548 aa28.44■■■□□ 2.14
SNX21-209ENST00000472219 IQGAP3Q86VI3 1631 aa28.44■■■□□ 2.14
SNX21-209ENST00000472219 DCAF11Q8TEB1 546 aa28.43■■■□□ 2.14
SNX21-209ENST00000472219 ERCC6L2Q5T890 1561 aa28.42■■■□□ 2.14
SNX21-209ENST00000472219 ERBINQ96RT1 1412 aa28.4■■■□□ 2.14
SNX21-209ENST00000472219 CLASP1Q7Z460 1538 aa28.4■■■□□ 2.14
SNX21-209ENST00000472219 PLCH2O75038 1416 aa28.4■■■□□ 2.14
SNX21-209ENST00000472219 KDM2AQ9Y2K7 1162 aa28.39■■■□□ 2.14
SNX21-209ENST00000472219 KTN1Q86UP2 1357 aaKnown RBP28.39■■■□□ 2.13
SNX21-209ENST00000472219 ZCCHC11Q5TAX3 1644 aaKnown RBP28.38■■■□□ 2.13
SNX21-209ENST00000472219 POLR3GLQ9BT43 218 aa28.38■■■□□ 2.13
SNX21-209ENST00000472219 MAGI2Q86UL8 1455 aa28.36■■■□□ 2.13
SNX21-209ENST00000472219 PRAG1Q86YV5 1406 aa28.36■■■□□ 2.13
SNX21-209ENST00000472219 TRPM1Q7Z4N2 1603 aa28.36■■■□□ 2.13
SNX21-209ENST00000472219 EFCAB2Q5VUJ9 269 aa28.35■■■□□ 2.13
SNX21-209ENST00000472219 ATP10AO60312 1499 aa28.34■■■□□ 2.13
SNX21-209ENST00000472219 LAMC1P11047 1609 aa28.33■■■□□ 2.13
SNX21-209ENST00000472219 ST20-MTHFSA0A0A6YYL1 179 aa28.32■■■□□ 2.12
SNX21-209ENST00000472219 EIF2AK4Q9P2K8 1649 aaKnown RBP28.32■■■□□ 2.12
SNX21-209ENST00000472219 ABCC1P33527 1531 aa28.31■■■□□ 2.12
SNX21-209ENST00000472219 ARAP3Q8WWN8 1544 aa28.3■■■□□ 2.12
SNX21-209ENST00000472219 PLA2R1Q13018 1463 aa28.29■■■□□ 2.12
SNX21-209ENST00000472219 E9PCH4 1651 aa28.29■■■□□ 2.12
SNX21-209ENST00000472219 GPRASP1Q5JY77 1395 aa28.29■■■□□ 2.12
SNX21-209ENST00000472219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.27■■■□□ 2.123e-6■■□□□ 11.7
SNX21-209ENST00000472219 RALBP1Q15311 655 aa28.26■■■□□ 2.11
SNX21-209ENST00000472219 A2MP01023 1474 aa28.26■■■□□ 2.11
SNX21-209ENST00000472219 PPP4R2Q9NY27 417 aa28.23■■■□□ 2.11
SNX21-209ENST00000472219 RTEL1-TNFRSF6BF6WH68 1400 aa28.22■■■□□ 2.11
SNX21-209ENST00000472219 SMG6Q86US8 1419 aaKnown RBP28.22■■■□□ 2.11
SNX21-209ENST00000472219 TMC1Q8TDI8 760 aa28.22■■■□□ 2.11
SNX21-209ENST00000472219 BRD4O60885 1362 aaPredicted RBP28.22■■■□□ 2.11
SNX21-209ENST00000472219 PRDM15P57071 1507 aaPredicted RBP28.2■■■□□ 2.11
SNX21-209ENST00000472219 MYBBP1AQ9BQG0 1328 aaKnown RBP28.2■■■□□ 2.1
SNX21-209ENST00000472219 RGL3Q3MIN7 710 aa28.18■■■□□ 2.1
SNX21-209ENST00000472219 PNISRQ8TF01 805 aaKnown RBP28.17■■■□□ 2.1
SNX21-209ENST00000472219 IRX6P78412 446 aaPredicted RBP28.17■■■□□ 2.1
SNX21-209ENST00000472219 TRAPPC8Q9Y2L5 1435 aa28.15■■■□□ 2.1
SNX21-209ENST00000472219 SPAG9O60271 1321 aaKnown RBP28.14■■■□□ 2.1
SNX21-209ENST00000472219 COL17A1Q9UMD9 1497 aaPredicted RBP28.14■■■□□ 2.09
SNX21-209ENST00000472219 NUDCQ9Y266 331 aa28.12■■■□□ 2.09
SNX21-209ENST00000472219 RBM19Q9Y4C8 960 aaKnown RBP28.12■■■□□ 2.09
SNX21-209ENST00000472219 ZFYVE16Q7Z3T8 1539 aa28.12■■■□□ 2.09
SNX21-209ENST00000472219 WASHC2CQ9Y4E1 1318 aa28.12■■■□□ 2.09
SNX21-209ENST00000472219 CNGB1Q14028 1251 aaPredicted RBP28.11■■■□□ 2.09
SNX21-209ENST00000472219 LRPPRCP42704 1394 aaKnown RBP28.11■■■□□ 2.09
SNX21-209ENST00000472219 STAC3Q96MF2 364 aa28.1■■■□□ 2.09
SNX21-209ENST00000472219 RNF17Q9BXT8 1623 aaKnown RBP28.09■■■□□ 2.09
SNX21-209ENST00000472219 WDR7Q9Y4E6 1490 aa28.09■■■□□ 2.09
SNX21-209ENST00000472219 NBPF1Q3BBV0 1214 aa28.08■■■□□ 2.09
SNX21-209ENST00000472219 DEPDC5O75140 1603 aa28.07■■■□□ 2.08
SNX21-209ENST00000472219 TRPM2O94759 1503 aa28.07■■■□□ 2.08
SNX21-209ENST00000472219 PARD3Q8TEW0 1356 aa28.07■■■□□ 2.08
SNX21-209ENST00000472219 NLRP13Q86W25 1043 aa28.06■■■□□ 2.08
SNX21-209ENST00000472219 TMF1P82094 1093 aa28.04■■■□□ 2.08
SNX21-209ENST00000472219 ABCA9Q8IUA7 1624 aa28.04■■■□□ 2.08
SNX21-209ENST00000472219 KANK1Q14678 1352 aa28.03■■■□□ 2.08
SNX21-209ENST00000472219 CEP152O94986 1710 aa28.02■■■□□ 2.08
SNX21-209ENST00000472219 SPHKAPQ2M3C7 1700 aa28.02■■■□□ 2.08
SNX21-209ENST00000472219 TET3O43151 1660 aa28.02■■■□□ 2.08
SNX21-209ENST00000472219 TESK2Q96S53 571 aa28.02■■■□□ 2.08
SNX21-209ENST00000472219 INO80Q9ULG1 1556 aaPredicted RBP28.01■■■□□ 2.08
SNX21-209ENST00000472219 ATP7AQ04656 1500 aa28.01■■■□□ 2.07
SNX21-209ENST00000472219 FANCAO15360 1455 aa28.01■■■□□ 2.07
SNX21-209ENST00000472219 RNF123Q5XPI4 1314 aa28.01■■■□□ 2.07
SNX21-209ENST00000472219 PTPRTO14522 1441 aa28.01■■■□□ 2.07
SNX21-209ENST00000472219 MADDQ8WXG6 1647 aa27.99■■■□□ 2.07
SNX21-209ENST00000472219 DISP3Q9P2K9 1392 aa27.98■■■□□ 2.07
SNX21-209ENST00000472219 PER1O15534 1290 aaPredicted RBP27.98■■■□□ 2.07
SNX21-209ENST00000472219 INSRP06213 1382 aa27.97■■■□□ 2.07
SNX21-209ENST00000472219 AFAP1Q8N556 730 aa27.97■■■□□ 2.07
SNX21-209ENST00000472219 ZMYM4Q5VZL5 1548 aa27.96■■■□□ 2.07
SNX21-209ENST00000472219 NEURL4Q96JN8 1562 aa27.96■■■□□ 2.07
SNX21-209ENST00000472219 VWDEQ8N2E2 1590 aa27.95■■■□□ 2.06
SNX21-209ENST00000472219 SCAPERQ9BY12 1400 aa27.93■■■□□ 2.06
SNX21-209ENST00000472219 IQGAP1P46940 1657 aa27.93■■■□□ 2.06
SNX21-209ENST00000472219 ANP32EQ9BTT0 268 aa27.92■■■□□ 2.06
SNX21-209ENST00000472219 ADGRL1O94910 1474 aa27.92■■■□□ 2.06
SNX21-209ENST00000472219 CDCA8Q53HL2 280 aa27.91■■■□□ 2.06
SNX21-209ENST00000472219 CLTCL1P53675 1640 aa27.91■■■□□ 2.06
SNX21-209ENST00000472219 PDE3BQ13370 1112 aa27.91■■■□□ 2.06
SNX21-209ENST00000472219 B4GALNT3Q6L9W6 998 aa27.88■■■□□ 2.05
SNX21-209ENST00000472219 SCAF11Q99590 1463 aaKnown RBP27.88■■■□□ 2.05
SNX21-209ENST00000472219 KIAA1210Q9ULL0 1709 aa27.87■■■□□ 2.05
SNX21-209ENST00000472219 PANK3Q9H999 370 aa27.87■■■□□ 2.05
SNX21-209ENST00000472219 FANCIQ9NVI1 1328 aa27.87■■■□□ 2.05
SNX21-209ENST00000472219 EIF3AQ14152 1382 aaKnown RBP27.86■■■□□ 2.05
SNX21-209ENST00000472219 ASXL2Q76L83 1435 aa27.84■■■□□ 2.05
SNX21-209ENST00000472219 SLC24A1O60721 1099 aa27.83■■■□□ 2.05
SNX21-209ENST00000472219 MYT1LQ9UL68 1186 aa27.82■■■□□ 2.04
SNX21-209ENST00000472219 SYNMO15061 1565 aa27.82■■■□□ 2.04
SNX21-209ENST00000472219 KIF3BO15066 747 aa27.81■■■□□ 2.04
SNX21-209ENST00000472219 CC2D1BQ5T0F9 858 aaKnown RBP27.81■■■□□ 2.04
SNX21-209ENST00000472219 BLMP54132 1417 aaPredicted RBP27.79■■■□□ 2.04
SNX21-209ENST00000472219 MROH1Q8NDA8 1641 aa27.78■■■□□ 2.04
SNX21-209ENST00000472219 MYOM2P54296 1465 aa27.78■■■□□ 2.04
SNX21-209ENST00000472219 CFAP74Q9C0B2 1584 aa27.78■■■□□ 2.04
SNX21-209ENST00000472219 ZNF518AQ6AHZ1 1483 aa27.77■■■□□ 2.04
SNX21-209ENST00000472219 CCDC136Q96JN2 1154 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms