RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 ZNF777Q9ULD5 760 aaPredicted RBP17.11■□□□□ 0.33
CDHR3-209ENST00000472116 SYCP2Q9BX26 1530 aa17.11■□□□□ 0.33
CDHR3-209ENST00000472116 NPHP4O75161 1426 aaPredicted RBP17.1■□□□□ 0.33
CDHR3-209ENST00000472116 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
CDHR3-209ENST00000472116 TNRQ92752 1358 aa17.09■□□□□ 0.33
CDHR3-209ENST00000472116 INO80Q9ULG1 1556 aaPredicted RBP17.08■□□□□ 0.32
CDHR3-209ENST00000472116 THEMISQ8N1K5 641 aaPredicted RBP17.08■□□□□ 0.32
CDHR3-209ENST00000472116 POTEAQ6S8J7 498 aa17.07■□□□□ 0.32
CDHR3-209ENST00000472116 STRCP1A6NGW2 1772 aa17.07■□□□□ 0.32
CDHR3-209ENST00000472116 LRRC7Q96NW7 1537 aa17.06■□□□□ 0.32
CDHR3-209ENST00000472116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.06■□□□□ 0.32
CDHR3-209ENST00000472116 FAM135AQ9P2D6 1515 aa17.06■□□□□ 0.32
CDHR3-209ENST00000472116 MED14O60244 1454 aa17.05■□□□□ 0.32
CDHR3-209ENST00000472116 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
CDHR3-209ENST00000472116 UGGT1Q9NYU2 1555 aa17.04■□□□□ 0.32
CDHR3-209ENST00000472116 PLEKHH2Q8IVE3 1493 aa17.03■□□□□ 0.32
CDHR3-209ENST00000472116 HNRNPMP52272 730 aaKnown RBP eCLIP17.02■□□□□ 0.32
CDHR3-209ENST00000472116 NLRP1Q9C000 1473 aa17.01■□□□□ 0.31
CDHR3-209ENST00000472116 PZPP20742 1482 aa17■□□□□ 0.31
CDHR3-209ENST00000472116 ARHGAP35Q9NRY4 1499 aa17■□□□□ 0.31
CDHR3-209ENST00000472116 UBTFP17480 764 aaKnown RBP16.99■□□□□ 0.31
CDHR3-209ENST00000472116 KDM5DQ9BY66 1539 aa16.98■□□□□ 0.31
CDHR3-209ENST00000472116 FBXO31Q5XUX0 539 aaPredicted RBP16.98■□□□□ 0.31
CDHR3-209ENST00000472116 KIAA1107Q9UPP5 1409 aa16.97■□□□□ 0.31
CDHR3-209ENST00000472116 XIRP1Q702N8 1843 aaKnown RBP16.96■□□□□ 0.3
CDHR3-209ENST00000472116 FAM135BQ49AJ0 1406 aa16.94■□□□□ 0.3
CDHR3-209ENST00000472116 MIA2Q96PC5 1412 aa16.94■□□□□ 0.3
CDHR3-209ENST00000472116 GPATCH8Q9UKJ3 1502 aaKnown RBP16.93■□□□□ 0.3
CDHR3-209ENST00000472116 CFDP1Q9UEE9 299 aaPredicted RBP16.93■□□□□ 0.3
CDHR3-209ENST00000472116 ZC3H13Q5T200 1668 aaKnown RBP16.93■□□□□ 0.3
CDHR3-209ENST00000472116 WASHC2CQ9Y4E1 1318 aa16.93■□□□□ 0.3
CDHR3-209ENST00000472116 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
CDHR3-209ENST00000472116 UPF1Q92900 1129 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDHR3-209ENST00000472116 EHMT2Q96KQ7 1210 aa16.91■□□□□ 0.3
CDHR3-209ENST00000472116 CASKIN1Q8WXD9 1431 aa16.9■□□□□ 0.3
CDHR3-209ENST00000472116 KIF3BO15066 747 aa16.9■□□□□ 0.3
CDHR3-209ENST00000472116 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.29
CDHR3-209ENST00000472116 CCNB3Q8WWL7 1395 aa16.88■□□□□ 0.29
CDHR3-209ENST00000472116 CFAP65Q6ZU64 1925 aaKnown RBP16.87■□□□□ 0.29
CDHR3-209ENST00000472116 PHLPP1O60346 1717 aa16.87■□□□□ 0.29
CDHR3-209ENST00000472116 RTEL1-TNFRSF6BF6WH68 1400 aa16.86■□□□□ 0.29
CDHR3-209ENST00000472116 TRIM52Q96A61 297 aa16.85■□□□□ 0.29
CDHR3-209ENST00000472116 LRRC9Q6ZRR7 1453 aa16.85■□□□□ 0.29
CDHR3-209ENST00000472116 SCAF11Q99590 1463 aaKnown RBP16.85■□□□□ 0.29
CDHR3-209ENST00000472116 UBR1Q8IWV7 1749 aa16.84■□□□□ 0.29
CDHR3-209ENST00000472116 MEX3CQ5U5Q3 659 aaKnown RBP16.83■□□□□ 0.28
CDHR3-209ENST00000472116 ZNF772Q68DY9 489 aaPredicted RBP16.83■□□□□ 0.28
CDHR3-209ENST00000472116 JCADQ9P266 1359 aa16.83■□□□□ 0.28
CDHR3-209ENST00000472116 FYCO1Q9BQS8 1478 aa16.82■□□□□ 0.28
CDHR3-209ENST00000472116 TMEM94Q12767 1356 aa16.78■□□□□ 0.28
CDHR3-209ENST00000472116 TXNDC2Q86VQ3 553 aa16.78■□□□□ 0.28
CDHR3-209ENST00000472116 EID1Q9Y6B2 187 aa16.78■□□□□ 0.28
CDHR3-209ENST00000472116 ERVK-7P63135 1459 aa16.75■□□□□ 0.27
CDHR3-209ENST00000472116 MBD5Q9P267 1494 aa16.75■□□□□ 0.27
CDHR3-209ENST00000472116 RXRBP28702 533 aa16.75■□□□□ 0.27
CDHR3-209ENST00000472116 MTUS2Q5JR59 1369 aa16.75■□□□□ 0.27
CDHR3-209ENST00000472116 CCDC141Q6ZP82 1450 aa16.74■□□□□ 0.27
CDHR3-209ENST00000472116 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
CDHR3-209ENST00000472116 SLIT1O75093 1534 aa16.74■□□□□ 0.27
CDHR3-209ENST00000472116 MSH6P52701 1360 aa16.74■□□□□ 0.27
CDHR3-209ENST00000472116 SPATA31A6Q5VVP1 1343 aa16.73■□□□□ 0.27
CDHR3-209ENST00000472116 ZNF644Q9H582 1327 aaPredicted RBP16.73■□□□□ 0.27
CDHR3-209ENST00000472116 TIAM1Q13009 1591 aa16.72■□□□□ 0.27
CDHR3-209ENST00000472116 ABCC3O15438 1527 aa16.72■□□□□ 0.27
CDHR3-209ENST00000472116 CDK12Q9NYV4 1490 aaPredicted RBP16.72■□□□□ 0.27
CDHR3-209ENST00000472116 ARHGAP23Q9P227 1491 aa16.72■□□□□ 0.27
CDHR3-209ENST00000472116 MAP3K1Q13233 1512 aa16.71■□□□□ 0.27
CDHR3-209ENST00000472116 CEP152O94986 1710 aa16.71■□□□□ 0.27
CDHR3-209ENST00000472116 LTKP29376 864 aa16.71■□□□□ 0.27
CDHR3-209ENST00000472116 COL16A1Q07092 1604 aaPredicted RBP16.7■□□□□ 0.26
CDHR3-209ENST00000472116 KCNA6P17658 529 aa16.7■□□□□ 0.26
CDHR3-209ENST00000472116 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
CDHR3-209ENST00000472116 NCOA2Q15596 1464 aa16.69■□□□□ 0.26
CDHR3-209ENST00000472116 RSPH4AQ5TD94 716 aa16.69■□□□□ 0.26
CDHR3-209ENST00000472116 LRP6O75581 1613 aa16.68■□□□□ 0.26
CDHR3-209ENST00000472116 SLAIN2Q9P270 581 aa16.68■□□□□ 0.26
CDHR3-209ENST00000472116 STAG3Q9UJ98 1225 aa16.68■□□□□ 0.26
CDHR3-209ENST00000472116 PRDM15P57071 1507 aaPredicted RBP16.68■□□□□ 0.26
CDHR3-209ENST00000472116 SHPRHQ149N8 1683 aa16.68■□□□□ 0.26
CDHR3-209ENST00000472116 NKTRP30414 1462 aaKnown RBP16.67■□□□□ 0.26
CDHR3-209ENST00000472116 SRCAPQ6ZRS2 3230 aa16.67■□□□□ 0.26
CDHR3-209ENST00000472116 RBM33Q96EV2 1170 aaKnown RBP16.66■□□□□ 0.26
CDHR3-209ENST00000472116 EIF2AK4Q9P2K8 1649 aaKnown RBP16.66■□□□□ 0.26
CDHR3-209ENST00000472116 TSPY4P0CV99 314 aa16.65■□□□□ 0.26
CDHR3-209ENST00000472116 TSPY10P0CW01 314 aa16.65■□□□□ 0.26
CDHR3-209ENST00000472116 EHBP1L1Q8N3D4 1523 aa16.65■□□□□ 0.26
CDHR3-209ENST00000472116 PIK3C2BO00750 1634 aa16.64■□□□□ 0.25
CDHR3-209ENST00000472116 ZRANB1Q9UGI0 708 aa16.64■□□□□ 0.25
CDHR3-209ENST00000472116 CAMSAP2Q08AD1 1489 aa16.63■□□□□ 0.25
CDHR3-209ENST00000472116 NWD1Q149M9 1564 aa16.63■□□□□ 0.25
CDHR3-209ENST00000472116 TMEM2Q9UHN6 1383 aa16.63■□□□□ 0.25
CDHR3-209ENST00000472116 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
CDHR3-209ENST00000472116 NUTM2BA6NNL0 878 aaPredicted RBP16.62■□□□□ 0.25
CDHR3-209ENST00000472116 NUTM2EB1AL46 878 aaPredicted RBP16.62■□□□□ 0.25
CDHR3-209ENST00000472116 NUTM2DQ5VT03 806 aaPredicted RBP16.62■□□□□ 0.25
CDHR3-209ENST00000472116 NUTM2AQ8IVF1 878 aaPredicted RBP16.62■□□□□ 0.25
CDHR3-209ENST00000472116 BCANQ96GW7 911 aa16.61■□□□□ 0.25
CDHR3-209ENST00000472116 SLC26A8Q96RN1 970 aa16.6■□□□□ 0.25
CDHR3-209ENST00000472116 ARHGEF5Q12774 1597 aa16.6■□□□□ 0.25
CDHR3-209ENST00000472116 EFCAB6Q5THR3 1501 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms