RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 AGLP35573 1532 aa28.83■■■□□ 2.21
CHMP2B-204ENST00000472024 RNF17Q9BXT8 1623 aaKnown RBP28.83■■■□□ 2.21
CHMP2B-204ENST00000472024 MYT1LQ9UL68 1186 aa28.81■■■□□ 2.2
CHMP2B-204ENST00000472024 PRDM15P57071 1507 aaPredicted RBP28.79■■■□□ 2.2
CHMP2B-204ENST00000472024 PZPP20742 1482 aa28.78■■■□□ 2.2
CHMP2B-204ENST00000472024 MROH1Q8NDA8 1641 aa28.78■■■□□ 2.2
CHMP2B-204ENST00000472024 VWDEQ8N2E2 1590 aa28.78■■■□□ 2.2
CHMP2B-204ENST00000472024 IQGAP3Q86VI3 1631 aa28.76■■■□□ 2.2
CHMP2B-204ENST00000472024 CLSPNQ9HAW4 1339 aa28.76■■■□□ 2.19
CHMP2B-204ENST00000472024 NUP155O75694 1391 aa28.72■■■□□ 2.19
CHMP2B-204ENST00000472024 FAM135AQ9P2D6 1515 aa28.7■■■□□ 2.19
CHMP2B-204ENST00000472024 KIF3BO15066 747 aa28.69■■■□□ 2.18
CHMP2B-204ENST00000472024 TRIM52Q96A61 297 aa28.69■■■□□ 2.18
CHMP2B-204ENST00000472024 LMTK2Q8IWU2 1503 aa28.69■■■□□ 2.18
CHMP2B-204ENST00000472024 MPHOSPH9Q99550 1183 aa28.68■■■□□ 2.18
CHMP2B-204ENST00000472024 SIGLEC1Q9BZZ2 1709 aa28.67■■■□□ 2.18
CHMP2B-204ENST00000472024 CCER1Q8TC90 406 aaPredicted RBP28.65■■■□□ 2.18
CHMP2B-204ENST00000472024 KANK1Q14678 1352 aa28.62■■■□□ 2.17
CHMP2B-204ENST00000472024 PPP6R1Q9UPN7 881 aa28.61■■■□□ 2.17
CHMP2B-204ENST00000472024 SLC4A1APQ9BWU0 796 aaKnown RBP28.6■■■□□ 2.17
CHMP2B-204ENST00000472024 TET3O43151 1660 aa28.6■■■□□ 2.17
CHMP2B-204ENST00000472024 ZC3H13Q5T200 1668 aaKnown RBP28.59■■■□□ 2.17
CHMP2B-204ENST00000472024 ABCC3O15438 1527 aa28.58■■■□□ 2.17
CHMP2B-204ENST00000472024 EFCAB6Q5THR3 1501 aa28.54■■■□□ 2.16
CHMP2B-204ENST00000472024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.54■■■□□ 2.16
CHMP2B-204ENST00000472024 ANKRD30BQ9BXX2 1392 aa28.53■■■□□ 2.16
CHMP2B-204ENST00000472024 PKD2Q13563 968 aa28.52■■■□□ 2.16
CHMP2B-204ENST00000472024 ARHGAP31Q2M1Z3 1444 aa28.51■■■□□ 2.15
CHMP2B-204ENST00000472024 GGT6Q6P531 493 aa28.5■■■□□ 2.15
CHMP2B-204ENST00000472024 RPRD2Q5VT52 1461 aaKnown RBP28.5■■■□□ 2.15
CHMP2B-204ENST00000472024 CEP152O94986 1710 aa28.49■■■□□ 2.15
CHMP2B-204ENST00000472024 E9PCH4 1651 aa28.49■■■□□ 2.15
CHMP2B-204ENST00000472024 PTPRTO14522 1441 aa28.46■■■□□ 2.15
CHMP2B-204ENST00000472024 CAMSAP1Q5T5Y3 1602 aa28.46■■■□□ 2.15
CHMP2B-204ENST00000472024 PLA2R1Q13018 1463 aa28.44■■■□□ 2.14
CHMP2B-204ENST00000472024 WASHC2CQ9Y4E1 1318 aa28.43■■■□□ 2.14
CHMP2B-204ENST00000472024 NPATQ14207 1427 aa28.42■■■□□ 2.14
CHMP2B-204ENST00000472024 ZEB1P37275 1124 aaPredicted RBP28.4■■■□□ 2.14
CHMP2B-204ENST00000472024 FOXD1Q16676 465 aa28.4■■■□□ 2.14
CHMP2B-204ENST00000472024 CNTLNQ9NXG0 1405 aa28.4■■■□□ 2.14
CHMP2B-204ENST00000472024 TRPM2O94759 1503 aa28.38■■■□□ 2.13
CHMP2B-204ENST00000472024 MROH2AA6NES4 1674 aa28.36■■■□□ 2.13
CHMP2B-204ENST00000472024 SPHKAPQ2M3C7 1700 aa28.36■■■□□ 2.13
CHMP2B-204ENST00000472024 CLTCQ00610 1675 aaKnown RBP28.35■■■□□ 2.13
CHMP2B-204ENST00000472024 NOS1P29475 1434 aa28.35■■■□□ 2.13
CHMP2B-204ENST00000472024 ARID4BQ4LE39 1312 aaPredicted RBP28.35■■■□□ 2.13
CHMP2B-204ENST00000472024 TIMELESSQ9UNS1 1208 aa28.34■■■□□ 2.13
CHMP2B-204ENST00000472024 SIN3AQ96ST3 1273 aa28.31■■■□□ 2.12
CHMP2B-204ENST00000472024 ADAMTSL3P82987 1691 aa28.29■■■□□ 2.12
CHMP2B-204ENST00000472024 MLECQ14165 292 aa28.28■■■□□ 2.12
CHMP2B-204ENST00000472024 NEURL4Q96JN8 1562 aa28.28■■■□□ 2.12
CHMP2B-204ENST00000472024 CCDC144AA2RUR9 1427 aa28.27■■■□□ 2.12
CHMP2B-204ENST00000472024 PREX1Q8TCU6 1659 aa28.26■■■□□ 2.12
CHMP2B-204ENST00000472024 SPATA31D1Q6ZQQ2 1576 aa28.26■■■□□ 2.11
CHMP2B-204ENST00000472024 FER1L4A9Z1Z3 1794 aa28.26■■■□□ 2.11
CHMP2B-204ENST00000472024 ZMYM3Q14202 1370 aa28.25■■■□□ 2.11
CHMP2B-204ENST00000472024 ERVK-7P63135 1459 aa28.25■■■□□ 2.11
CHMP2B-204ENST00000472024 PIK3C2BO00750 1634 aa28.24■■■□□ 2.11
CHMP2B-204ENST00000472024 SYNMO15061 1565 aa28.24■■■□□ 2.11
CHMP2B-204ENST00000472024 CLTCL1P53675 1640 aa28.23■■■□□ 2.11
CHMP2B-204ENST00000472024 ESF1Q9H501 851 aaKnown RBP28.2■■■□□ 2.1
CHMP2B-204ENST00000472024 MADDQ8WXG6 1647 aa28.19■■■□□ 2.1
CHMP2B-204ENST00000472024 SPATA31E1Q6ZUB1 1445 aa28.18■■■□□ 2.1
CHMP2B-204ENST00000472024 NEUROD1Q13562 356 aa28.17■■■□□ 2.1
CHMP2B-204ENST00000472024 TONSLQ96HA7 1378 aa28.15■■■□□ 2.1
CHMP2B-204ENST00000472024 C3P01024 1663 aa28.15■■■□□ 2.1
CHMP2B-204ENST00000472024 SLC52A1Q9NWF4 448 aa28.14■■■□□ 2.1
CHMP2B-204ENST00000472024 UGGT1Q9NYU2 1555 aa28.14■■■□□ 2.1
CHMP2B-204ENST00000472024 ADGRB3O60242 1522 aa28.12■■■□□ 2.09
CHMP2B-204ENST00000472024 CFAP65Q6ZU64 1925 aaKnown RBP28.1■■■□□ 2.09
CHMP2B-204ENST00000472024 FBXO31Q5XUX0 539 aaPredicted RBP28.1■■■□□ 2.09
CHMP2B-204ENST00000472024 RIMS1Q86UR5 1692 aaKnown RBP28.1■■■□□ 2.09
CHMP2B-204ENST00000472024 KIF1BO60333 1816 aa28.08■■■□□ 2.09
CHMP2B-204ENST00000472024 L3MBTL2Q969R5 705 aa28.07■■■□□ 2.08
CHMP2B-204ENST00000472024 TNRQ92752 1358 aa28.05■■■□□ 2.08
CHMP2B-204ENST00000472024 PPP1R15AO75807 674 aaPredicted RBP28.04■■■□□ 2.08
CHMP2B-204ENST00000472024 KDM5AP29375 1690 aaKnown RBP28.03■■■□□ 2.08
CHMP2B-204ENST00000472024 IDI1Q13907 227 aa28.03■■■□□ 2.08
CHMP2B-204ENST00000472024 NLRP1Q9C000 1473 aa28.02■■■□□ 2.08
CHMP2B-204ENST00000472024 TMEM131LA2VDJ0 1609 aa28.02■■■□□ 2.08
CHMP2B-204ENST00000472024 STAC3Q96MF2 364 aa28.01■■■□□ 2.07
CHMP2B-204ENST00000472024 UHRF1BP1Q6BDS2 1440 aa28.01■■■□□ 2.07
CHMP2B-204ENST00000472024 PTPRMP28827 1452 aa27.98■■■□□ 2.07
CHMP2B-204ENST00000472024 IFT172Q9UG01 1749 aa27.97■■■□□ 2.07
CHMP2B-204ENST00000472024 RPGRIP1LQ68CZ1 1315 aa27.95■■■□□ 2.07
CHMP2B-204ENST00000472024 CEBPAP49715 358 aaPredicted RBP27.95■■■□□ 2.06
CHMP2B-204ENST00000472024 MYOM2P54296 1465 aa27.95■■■□□ 2.06
CHMP2B-204ENST00000472024 A2ML1A8K2U0 1454 aa27.93■■■□□ 2.06
CHMP2B-204ENST00000472024 NRXN1Q9ULB1 1477 aa27.91■■■□□ 2.06
CHMP2B-204ENST00000472024 MYO3AQ8NEV4 1616 aa27.91■■■□□ 2.06
CHMP2B-204ENST00000472024 NEXMIFQ5QGS0 1516 aa27.9■■■□□ 2.06
CHMP2B-204ENST00000472024 ZFYVE9O95405 1425 aa27.9■■■□□ 2.06
CHMP2B-204ENST00000472024 SETD1BQ9UPS6 1966 aaKnown RBP27.9■■■□□ 2.06
CHMP2B-204ENST00000472024 PPLO60437 1756 aa27.89■■■□□ 2.06
CHMP2B-204ENST00000472024 RGL3Q3MIN7 710 aa27.89■■■□□ 2.06
CHMP2B-204ENST00000472024 PRAG1Q86YV5 1406 aa27.89■■■□□ 2.06
CHMP2B-204ENST00000472024 UBR1Q8IWV7 1749 aa27.89■■■□□ 2.05
CHMP2B-204ENST00000472024 DCAF11Q8TEB1 546 aa27.87■■■□□ 2.05
CHMP2B-204ENST00000472024 MYO5BQ9ULV0 1848 aa27.87■■■□□ 2.05
CHMP2B-204ENST00000472024 ZNF142P52746 1687 aaPredicted RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms