RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 SHANK2Q9UPX8 1470 aa23.36■■□□□ 1.33
VPS8-221ENST00000471655 WASHC2CQ9Y4E1 1318 aa23.35■■□□□ 1.33
VPS8-221ENST00000471655 PTPRTO14522 1441 aa23.35■■□□□ 1.33
VPS8-221ENST00000471655 ABCC5O15440 1437 aa23.34■■□□□ 1.33
VPS8-221ENST00000471655 EIF2AK4Q9P2K8 1649 aaKnown RBP23.34■■□□□ 1.33
VPS8-221ENST00000471655 NCOA1Q15788 1441 aa23.33■■□□□ 1.33
VPS8-221ENST00000471655 ZNF142P52746 1687 aaPredicted RBP23.33■■□□□ 1.33
VPS8-221ENST00000471655 MYO3AQ8NEV4 1616 aa23.33■■□□□ 1.32
VPS8-221ENST00000471655 RNF17Q9BXT8 1623 aaKnown RBP23.33■■□□□ 1.32
VPS8-221ENST00000471655 PZPP20742 1482 aa23.32■■□□□ 1.32
VPS8-221ENST00000471655 DUOX2Q9NRD8 1548 aa23.32■■□□□ 1.32
VPS8-221ENST00000471655 CROCC2H7BZ55 1655 aa23.31■■□□□ 1.32
VPS8-221ENST00000471655 DAPK1P53355 1430 aa23.3■■□□□ 1.32
VPS8-221ENST00000471655 CEP170BQ9Y4F5 1589 aaPredicted RBP23.3■■□□□ 1.32
VPS8-221ENST00000471655 DNMT1P26358 1616 aaKnown RBP23.3■■□□□ 1.32
VPS8-221ENST00000471655 CAMSAP1Q5T5Y3 1602 aa23.3■■□□□ 1.32
VPS8-221ENST00000471655 CERKQ8TCT0 537 aa23.28■■□□□ 1.32
VPS8-221ENST00000471655 PLA2R1Q13018 1463 aa23.28■■□□□ 1.32
VPS8-221ENST00000471655 FBXO31Q5XUX0 539 aaPredicted RBP23.27■■□□□ 1.32
VPS8-221ENST00000471655 KIF15Q9NS87 1388 aa23.27■■□□□ 1.31
VPS8-221ENST00000471655 ZC3H13Q5T200 1668 aaKnown RBP23.26■■□□□ 1.31
VPS8-221ENST00000471655 A2ML1A8K2U0 1454 aa23.26■■□□□ 1.31
VPS8-221ENST00000471655 TNRQ92752 1358 aa23.26■■□□□ 1.31
VPS8-221ENST00000471655 ERBINQ96RT1 1412 aa23.25■■□□□ 1.31
VPS8-221ENST00000471655 ABCC3O15438 1527 aa23.24■■□□□ 1.31
VPS8-221ENST00000471655 MROH1Q8NDA8 1641 aa23.24■■□□□ 1.31
VPS8-221ENST00000471655 PKD2Q13563 968 aa23.24■■□□□ 1.31
VPS8-221ENST00000471655 RRP7BPQ9NSQ0 103 aa23.23■■□□□ 1.31
VPS8-221ENST00000471655 ANKRD30AQ9BXX3 1397 aa23.21■■□□□ 1.31
VPS8-221ENST00000471655 NCKAP5LQ9HCH0 1330 aa23.2■■□□□ 1.3
VPS8-221ENST00000471655 NLRP1Q9C000 1473 aa23.19■■□□□ 1.3
VPS8-221ENST00000471655 PRDM15P57071 1507 aaPredicted RBP23.18■■□□□ 1.3
VPS8-221ENST00000471655 ADGRL2O95490 1459 aa23.17■■□□□ 1.3
VPS8-221ENST00000471655 SPATA31D1Q6ZQQ2 1576 aa23.16■■□□□ 1.3
VPS8-221ENST00000471655 CHIC2Q9UKJ5 165 aa23.16■■□□□ 1.3
VPS8-221ENST00000471655 FAM50AQ14320 339 aaKnown RBP23.15■■□□□ 1.3
VPS8-221ENST00000471655 ARHGAP31Q2M1Z3 1444 aa23.15■■□□□ 1.3
VPS8-221ENST00000471655 DEPDC5O75140 1603 aa23.15■■□□□ 1.3
VPS8-221ENST00000471655 THEMISQ8N1K5 641 aaPredicted RBP23.14■■□□□ 1.29
VPS8-221ENST00000471655 LTBP4Q8N2S1 1624 aa23.14■■□□□ 1.29
VPS8-221ENST00000471655 CEP152O94986 1710 aa23.13■■□□□ 1.29
VPS8-221ENST00000471655 ERVK-7P63135 1459 aa23.12■■□□□ 1.29
VPS8-221ENST00000471655 KANK1Q14678 1352 aa23.11■■□□□ 1.29
VPS8-221ENST00000471655 UGGT1Q9NYU2 1555 aa23.1■■□□□ 1.29
VPS8-221ENST00000471655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.08■■□□□ 1.29
VPS8-221ENST00000471655 IQSEC2Q5JU85 1478 aa23.08■■□□□ 1.29
VPS8-221ENST00000471655 LMTK2Q8IWU2 1503 aa23.08■■□□□ 1.28
VPS8-221ENST00000471655 VWDEQ8N2E2 1590 aa23.07■■□□□ 1.28
VPS8-221ENST00000471655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.07■■□□□ 1.28
VPS8-221ENST00000471655 ANKLE2Q86XL3 938 aa23.07■■□□□ 1.28
VPS8-221ENST00000471655 POLR1AO95602 1720 aaPredicted RBP23.06■■□□□ 1.28
VPS8-221ENST00000471655 ANKRD50Q9ULJ7 1429 aa23.04■■□□□ 1.28
VPS8-221ENST00000471655 NEURL4Q96JN8 1562 aa23.04■■□□□ 1.28
VPS8-221ENST00000471655 ZNF335Q9H4Z2 1342 aaPredicted RBP23.04■■□□□ 1.28
VPS8-221ENST00000471655 MED14O60244 1454 aa23.03■■□□□ 1.28
VPS8-221ENST00000471655 ROCK1Q13464 1354 aa23.01■■□□□ 1.27
VPS8-221ENST00000471655 CFAP65Q6ZU64 1925 aaKnown RBP23.01■■□□□ 1.27
VPS8-221ENST00000471655 UBR1Q8IWV7 1749 aa22.98■■□□□ 1.27
VPS8-221ENST00000471655 NPHP4O75161 1426 aaPredicted RBP22.97■■□□□ 1.27
VPS8-221ENST00000471655 EFCAB6Q5THR3 1501 aa22.96■■□□□ 1.27
VPS8-221ENST00000471655 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
VPS8-221ENST00000471655 SLIT1O75093 1534 aa22.93■■□□□ 1.26
VPS8-221ENST00000471655 ARHGAP23Q9P227 1491 aa22.93■■□□□ 1.26
VPS8-221ENST00000471655 NOS1P29475 1434 aa22.93■■□□□ 1.26
VPS8-221ENST00000471655 RPRD2Q5VT52 1461 aaKnown RBP22.92■■□□□ 1.26
VPS8-221ENST00000471655 KDM5AP29375 1690 aaKnown RBP22.91■■□□□ 1.26
VPS8-221ENST00000471655 CPS1P31327 1500 aa22.91■■□□□ 1.26
VPS8-221ENST00000471655 IQGAP1P46940 1657 aa22.9■■□□□ 1.26
VPS8-221ENST00000471655 UNC13BO14795 1591 aa22.9■■□□□ 1.26
VPS8-221ENST00000471655 IDI1Q13907 227 aa22.9■■□□□ 1.26
VPS8-221ENST00000471655 PIK3C2BO00750 1634 aa22.9■■□□□ 1.26
VPS8-221ENST00000471655 SLC52A1Q9NWF4 448 aa22.89■■□□□ 1.25
VPS8-221ENST00000471655 SCAF11Q99590 1463 aaKnown RBP22.89■■□□□ 1.25
VPS8-221ENST00000471655 SYNMO15061 1565 aa22.89■■□□□ 1.25
VPS8-221ENST00000471655 TET3O43151 1660 aa22.88■■□□□ 1.25
VPS8-221ENST00000471655 LTKP29376 864 aa22.87■■□□□ 1.25
VPS8-221ENST00000471655 TXNDC2Q86VQ3 553 aa22.87■■□□□ 1.25
VPS8-221ENST00000471655 RRBP1Q9P2E9 1410 aaKnown RBP22.87■■□□□ 1.25
VPS8-221ENST00000471655 TMEM2Q9UHN6 1383 aa22.87■■□□□ 1.25
VPS8-221ENST00000471655 STAG3Q9UJ98 1225 aa22.86■■□□□ 1.25
VPS8-221ENST00000471655 EID1Q9Y6B2 187 aa22.86■■□□□ 1.25
VPS8-221ENST00000471655 ITGAEP38570 1179 aa22.85■■□□□ 1.25
VPS8-221ENST00000471655 GCC2Q8IWJ2 1684 aa22.84■■□□□ 1.25
VPS8-221ENST00000471655 UBAP1LF5GYI3 381 aa22.82■■□□□ 1.24
VPS8-221ENST00000471655 IQGAP3Q86VI3 1631 aa22.81■■□□□ 1.24
VPS8-221ENST00000471655 ADGRB3O60242 1522 aa22.8■■□□□ 1.24
VPS8-221ENST00000471655 NUP155O75694 1391 aa22.78■■□□□ 1.24
VPS8-221ENST00000471655 E9PCH4 1651 aa22.76■■□□□ 1.23
VPS8-221ENST00000471655 TOM1O60784 492 aa22.75■■□□□ 1.23
VPS8-221ENST00000471655 STRCP1A6NGW2 1772 aa22.75■■□□□ 1.23
VPS8-221ENST00000471655 LRRC7Q96NW7 1537 aa22.73■■□□□ 1.23
VPS8-221ENST00000471655 TMEM131LA2VDJ0 1609 aa22.71■■□□□ 1.23
VPS8-221ENST00000471655 HDGFP51858 240 aaKnown RBP22.71■■□□□ 1.23
VPS8-221ENST00000471655 ZFYVE9O95405 1425 aa22.7■■□□□ 1.22
VPS8-221ENST00000471655 NAIPQ13075 1403 aa22.7■■□□□ 1.22
VPS8-221ENST00000471655 MYO5BQ9ULV0 1848 aa22.66■■□□□ 1.22
VPS8-221ENST00000471655 RIMS2Q9UQ26 1411 aa22.65■■□□□ 1.22
VPS8-221ENST00000471655 PLEKHG1Q9ULL1 1385 aa22.65■■□□□ 1.22
VPS8-221ENST00000471655 KCNA6P17658 529 aa22.65■■□□□ 1.22
VPS8-221ENST00000471655 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms