RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 MYSM1Q5VVJ2 828 aa9.8□□□□□ -0.84
NF1-208ENST00000471572 ILDR1Q86SU0 546 aaPredicted RBP9.8□□□□□ -0.84
NF1-208ENST00000471572 GLMNQ92990 594 aa9.8□□□□□ -0.84
NF1-208ENST00000471572 CALR3Q96L12 384 aaKnown RBP9.8□□□□□ -0.84
NF1-208ENST00000471572 ATP1B4Q9UN42 357 aaPredicted RBP9.8□□□□□ -0.84
NF1-208ENST00000471572 CARNS1A5YM72 827 aa9.79□□□□□ -0.84
NF1-208ENST00000471572 TBC1D12O60347 775 aa9.79□□□□□ -0.84
NF1-208ENST00000471572 BRD1O95696 1058 aa9.79□□□□□ -0.84
NF1-208ENST00000471572 RFC5P40937 340 aa9.79□□□□□ -0.84
NF1-208ENST00000471572 KCNA1Q09470 495 aa9.79□□□□□ -0.84
NF1-208ENST00000471572 PLPP6Q8IY26 295 aa9.79□□□□□ -0.84
NF1-208ENST00000471572 MTMR14Q8NCE2 650 aa9.79□□□□□ -0.84
NF1-208ENST00000471572 ACIN1Q9UKV3 1341 aaKnown RBP9.78□□□□□ -0.84
NF1-208ENST00000471572 PTGER2P43116 358 aa9.78□□□□□ -0.84
NF1-208ENST00000471572 MAP3K9P80192 1104 aa9.78□□□□□ -0.84
NF1-208ENST00000471572 BANK1Q8NDB2 785 aa9.78□□□□□ -0.84
NF1-208ENST00000471572 TMEM106CQ9BVX2 250 aa9.77□□□□□ -0.85
NF1-208ENST00000471572 AMOTL2Q9Y2J4 779 aa9.77□□□□□ -0.85
NF1-208ENST00000471572 TRPC6Q9Y210 931 aa9.76□□□□□ -0.85
NF1-208ENST00000471572 PATL2C9JE40 543 aaKnown RBP9.75□□□□□ -0.85
NF1-208ENST00000471572 CLK2P49760 499 aaKnown RBP9.75□□□□□ -0.85
NF1-208ENST00000471572 FAM217BQ9NTX9 383 aaPredicted RBP9.75□□□□□ -0.85
NF1-208ENST00000471572 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.74□□□□□ -0.85
NF1-208ENST00000471572 PDE4CQ08493 712 aa9.74□□□□□ -0.85
NF1-208ENST00000471572 TMC2Q8TDI7 906 aa9.74□□□□□ -0.85
NF1-208ENST00000471572 PBXIP1Q96AQ6 731 aa9.74□□□□□ -0.85
NF1-208ENST00000471572 CCDC27Q2M243 656 aa9.73□□□□□ -0.85
NF1-208ENST00000471572 NLRP7Q8WX94 980 aa9.73□□□□□ -0.85
NF1-208ENST00000471572 UPF1Q92900 1129 aaKnown RBP eCLIP9.73□□□□□ -0.85
NF1-208ENST00000471572 CDHR5Q9HBB8 845 aa9.73□□□□□ -0.85
NF1-208ENST00000471572 NPDC1Q9NQX5 325 aaPredicted RBP9.73□□□□□ -0.85
NF1-208ENST00000471572 DPY19L2Q6NUT2 758 aa9.73□□□□□ -0.85
NF1-208ENST00000471572 UNCXA6NJT0 531 aa9.72□□□□□ -0.85
NF1-208ENST00000471572 PAK3O75914 559 aaPredicted RBP9.72□□□□□ -0.85
NF1-208ENST00000471572 MICALL2Q8IY33 904 aa9.72□□□□□ -0.85
NF1-208ENST00000471572 USTQ9Y2C2 406 aa9.72□□□□□ -0.85
NF1-208ENST00000471572 IVNS1ABPQ9Y6Y0 642 aa9.72□□□□□ -0.85
NF1-208ENST00000471572 SRPK2P78362 688 aaKnown RBP9.72□□□□□ -0.85
NF1-208ENST00000471572 USP35Q9P2H5 1018 aa9.72□□□□□ -0.85
NF1-208ENST00000471572 C2orf72A6NCS6 295 aa9.71□□□□□ -0.86
NF1-208ENST00000471572 ABL2P42684 1182 aa9.71□□□□□ -0.86
NF1-208ENST00000471572 ADAMTS19Q8TE59 1207 aa9.71□□□□□ -0.86
NF1-208ENST00000471572 HSP90B1P14625 803 aaKnown RBP9.7□□□□□ -0.86
NF1-208ENST00000471572 KIF3CO14782 793 aa9.7□□□□□ -0.86
NF1-208ENST00000471572 PUS7Q96PZ0 661 aaKnown RBP9.7□□□□□ -0.86
NF1-208ENST00000471572 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.7□□□□□ -0.868e-7■■■□□ 14.8
NF1-208ENST00000471572 LIMD1Q9UGP4 676 aa9.7□□□□□ -0.86
NF1-208ENST00000471572 TBC1D2BQ9UPU7 963 aa9.7□□□□□ -0.86
NF1-208ENST00000471572 PRKAR2AP13861 404 aaKnown RBP9.69□□□□□ -0.86
NF1-208ENST00000471572 SND1Q7KZF4 910 aaKnown RBP eCLIP9.69□□□□□ -0.86
NF1-208ENST00000471572 RFX1P22670 979 aa9.68□□□□□ -0.86
NF1-208ENST00000471572 CFAP70Q5T0N1 1121 aa9.68□□□□□ -0.86
NF1-208ENST00000471572 PPP2R2DQ66LE6 453 aa9.68□□□□□ -0.86
NF1-208ENST00000471572 FAM161AQ3B820 660 aa9.67□□□□□ -0.86
NF1-208ENST00000471572 TMEM259Q4ZIN3 620 aa9.67□□□□□ -0.86
NF1-208ENST00000471572 PHF12Q96QT6 1004 aa9.67□□□□□ -0.86
NF1-208ENST00000471572 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
NF1-208ENST00000471572 CDK11BP21127 795 aaKnown RBP9.66□□□□□ -0.86
NF1-208ENST00000471572 IGSF5Q9NSI5 407 aa9.66□□□□□ -0.86
NF1-208ENST00000471572 CDK11AQ9UQ88 783 aaPredicted RBP9.66□□□□□ -0.86
NF1-208ENST00000471572 HMGB1P09429 215 aaKnown RBP9.65□□□□□ -0.86
NF1-208ENST00000471572 CSB-PGBD3P0DP91 1061 aa9.65□□□□□ -0.87
NF1-208ENST00000471572 METTL3Q86U44 580 aaKnown RBP9.63□□□□□ -0.87
NF1-208ENST00000471572 HDGFL1Q5TGJ6 251 aa9.62□□□□□ -0.87
NF1-208ENST00000471572 WWC1Q8IX03 1113 aa9.62□□□□□ -0.87
NF1-208ENST00000471572 EVI5O60447 810 aa9.61□□□□□ -0.87
NF1-208ENST00000471572 TMEM88BA6NKF7 163 aa9.6□□□□□ -0.87
NF1-208ENST00000471572 SOCS7O14512 581 aa9.6□□□□□ -0.87
NF1-208ENST00000471572 EN1Q05925 392 aaPredicted RBP9.59□□□□□ -0.87
NF1-208ENST00000471572 RSPH4AQ5TD94 716 aa9.58□□□□□ -0.88
NF1-208ENST00000471572 PELP1Q8IZL8 1130 aaKnown RBP9.58□□□□□ -0.88
NF1-208ENST00000471572 MS4A3Q96HJ5 214 aa9.58□□□□□ -0.88
NF1-208ENST00000471572 PPP1R12CQ9BZL4 782 aa9.58□□□□□ -0.88
NF1-208ENST00000471572 ZRANB1Q9UGI0 708 aa9.58□□□□□ -0.88
NF1-208ENST00000471572 GPR37L1O60883 481 aa9.57□□□□□ -0.88
NF1-208ENST00000471572 TSR1Q2NL82 804 aaKnown RBP9.57□□□□□ -0.88
NF1-208ENST00000471572 PDCD7Q8N8D1 485 aaKnown RBP9.57□□□□□ -0.88
NF1-208ENST00000471572 TMEM121BQ9BXQ6 578 aaPredicted RBP9.57□□□□□ -0.88
NF1-208ENST00000471572 VRTNQ9H8Y1 702 aa9.57□□□□□ -0.88
NF1-208ENST00000471572 MYT1LQ9UL68 1186 aa9.57□□□□□ -0.88
NF1-208ENST00000471572 TTLL13PA6NNM8 815 aa9.56□□□□□ -0.88
NF1-208ENST00000471572 QPCTQ16769 361 aa9.56□□□□□ -0.88
NF1-208ENST00000471572 RIC3Q7Z5B4 369 aa9.56□□□□□ -0.88
NF1-208ENST00000471572 KIAA1522Q9P206 1035 aaPredicted RBP9.56□□□□□ -0.88
NF1-208ENST00000471572 RBM47A0AV96 593 aaKnown RBP9.56□□□□□ -0.88
NF1-208ENST00000471572 FAM177A1Q8N128 213 aaPredicted RBP9.56□□□□□ -0.88
NF1-208ENST00000471572 PXYLP1Q8TE99 480 aa9.56□□□□□ -0.88
NF1-208ENST00000471572 MAP3K7O43318 606 aa9.55□□□□□ -0.88
NF1-208ENST00000471572 CACNB1Q02641 598 aaPredicted RBP9.55□□□□□ -0.88
NF1-208ENST00000471572 SPIRE2Q8WWL2 714 aa9.55□□□□□ -0.88
NF1-208ENST00000471572 GJD4Q96KN9 370 aaPredicted RBP9.55□□□□□ -0.88
NF1-208ENST00000471572 PALM3A6NDB9 673 aaPredicted RBP9.54□□□□□ -0.88
NF1-208ENST00000471572 TMEM92Q6UXU6 159 aa9.53□□□□□ -0.88
NF1-208ENST00000471572 TXNDC2Q86VQ3 553 aa9.53□□□□□ -0.88
NF1-208ENST00000471572 AP1G2O75843 785 aa9.53□□□□□ -0.88
NF1-208ENST00000471572 USP17L8P0C7I0 530 aa9.53□□□□□ -0.88
NF1-208ENST00000471572 CSPP1Q1MSJ5 1256 aa9.53□□□□□ -0.88
NF1-208ENST00000471572 UCN2Q96RP3 112 aa9.53□□□□□ -0.88
NF1-208ENST00000471572 GNEQ9Y223 722 aaKnown RBP9.53□□□□□ -0.88
NF1-208ENST00000471572 FXR2P51116 673 aaKnown RBP eCLIP9.52□□□□□ -0.898e-7■■■□□ 17.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms