RNA–Protein interactions for RNA: ENST00000471471.1

GTF2B-205, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-205ENST00000471471 KIDINS220Q9ULH0 1771 aa11.11□□□□□ -0.63
GTF2B-205ENST00000471471 RANGAP1P46060 587 aaPredicted RBP11.1□□□□□ -0.63
GTF2B-205ENST00000471471 VWDEQ8N2E2 1590 aa11.1□□□□□ -0.63
GTF2B-205ENST00000471471 SLC4A1APQ9BWU0 796 aaKnown RBP11.09□□□□□ -0.63
GTF2B-205ENST00000471471 ATF5Q9Y2D1 282 aaPredicted RBP11.09□□□□□ -0.63
GTF2B-205ENST00000471471 DNMT1P26358 1616 aaKnown RBP11.08□□□□□ -0.64
GTF2B-205ENST00000471471 ABCC1P33527 1531 aa11.08□□□□□ -0.64
GTF2B-205ENST00000471471 CLTCQ00610 1675 aaKnown RBP11.07□□□□□ -0.64
GTF2B-205ENST00000471471 A2ML1A8K2U0 1454 aa11.06□□□□□ -0.64
GTF2B-205ENST00000471471 CDC42BPBQ9Y5S2 1711 aa11.06□□□□□ -0.64
GTF2B-205ENST00000471471 POLR1AO95602 1720 aaPredicted RBP11.05□□□□□ -0.64
GTF2B-205ENST00000471471 ITSN2Q9NZM3 1697 aa11.04□□□□□ -0.64
GTF2B-205ENST00000471471 TROQ12816 1431 aaPredicted RBP11.04□□□□□ -0.64
GTF2B-205ENST00000471471 SETD1AO15047 1707 aaKnown RBP11.04□□□□□ -0.64
GTF2B-205ENST00000471471 CSRNP3Q8WYN3 585 aa11.03□□□□□ -0.64
GTF2B-205ENST00000471471 LRRC7Q96NW7 1537 aa11.03□□□□□ -0.64
GTF2B-205ENST00000471471 STRCP1A6NGW2 1772 aa11.02□□□□□ -0.65
GTF2B-205ENST00000471471 PLXNC1O60486 1568 aa11.02□□□□□ -0.65
GTF2B-205ENST00000471471 SAMD9LQ8IVG5 1584 aa11.02□□□□□ -0.65
GTF2B-205ENST00000471471 PREX2Q70Z35 1606 aa11.01□□□□□ -0.65
GTF2B-205ENST00000471471 RNF17Q9BXT8 1623 aaKnown RBP11.01□□□□□ -0.65
GTF2B-205ENST00000471471 MED14O60244 1454 aa11□□□□□ -0.65
GTF2B-205ENST00000471471 CDK11AQ9UQ88 783 aaPredicted RBP11□□□□□ -0.65
GTF2B-205ENST00000471471 REM2Q8IYK8 340 aaPredicted RBP10.99□□□□□ -0.65
GTF2B-205ENST00000471471 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.99□□□□□ -0.65
GTF2B-205ENST00000471471 ANKLE2Q86XL3 938 aa10.98□□□□□ -0.65
GTF2B-205ENST00000471471 UPF1Q92900 1129 aaKnown RBP eCLIP10.98□□□□□ -0.65
GTF2B-205ENST00000471471 NPHP4O75161 1426 aaPredicted RBP10.98□□□□□ -0.65
GTF2B-205ENST00000471471 GGT6Q6P531 493 aa10.97□□□□□ -0.65
GTF2B-205ENST00000471471 SP7Q8TDD2 431 aaPredicted RBP10.97□□□□□ -0.65
GTF2B-205ENST00000471471 ATP1B4Q9UN42 357 aaPredicted RBP10.97□□□□□ -0.65
GTF2B-205ENST00000471471 CLIP1P30622 1438 aa10.97□□□□□ -0.65
GTF2B-205ENST00000471471 A2MP01023 1474 aa10.97□□□□□ -0.65
GTF2B-205ENST00000471471 DEPDC5O75140 1603 aa10.97□□□□□ -0.65
GTF2B-205ENST00000471471 SYNMO15061 1565 aa10.96□□□□□ -0.65
GTF2B-205ENST00000471471 TNRQ92752 1358 aa10.96□□□□□ -0.65
GTF2B-205ENST00000471471 SPAG9O60271 1321 aaKnown RBP10.96□□□□□ -0.65
GTF2B-205ENST00000471471 FBXO31Q5XUX0 539 aaPredicted RBP10.96□□□□□ -0.65
GTF2B-205ENST00000471471 LRRIQ1Q96JM4 1722 aa10.95□□□□□ -0.66
GTF2B-205ENST00000471471 ATP7AQ04656 1500 aa10.94□□□□□ -0.66
GTF2B-205ENST00000471471 FMN1Q68DA7 1419 aa10.94□□□□□ -0.66
GTF2B-205ENST00000471471 IQGAP1P46940 1657 aa10.94□□□□□ -0.66
GTF2B-205ENST00000471471 INO80Q9ULG1 1556 aaPredicted RBP10.94□□□□□ -0.66
GTF2B-205ENST00000471471 SYCP2Q9BX26 1530 aa10.94□□□□□ -0.66
GTF2B-205ENST00000471471 FAM135BQ49AJ0 1406 aa10.93□□□□□ -0.66
GTF2B-205ENST00000471471 PIP4P2Q8N4L2 257 aa10.93□□□□□ -0.66
GTF2B-205ENST00000471471 CDC42BPAQ5VT25 1732 aa10.92□□□□□ -0.66
GTF2B-205ENST00000471471 HNRNPMP52272 730 aaKnown RBP eCLIP10.92□□□□□ -0.66
GTF2B-205ENST00000471471 THEMISQ8N1K5 641 aaPredicted RBP10.92□□□□□ -0.66
GTF2B-205ENST00000471471 PZPP20742 1482 aa10.92□□□□□ -0.66
GTF2B-205ENST00000471471 XIRP1Q702N8 1843 aaKnown RBP10.91□□□□□ -0.66
GTF2B-205ENST00000471471 UGGT1Q9NYU2 1555 aa10.9□□□□□ -0.66
GTF2B-205ENST00000471471 ARHGAP35Q9NRY4 1499 aa10.9□□□□□ -0.66
GTF2B-205ENST00000471471 NLRP1Q9C000 1473 aa10.89□□□□□ -0.67
GTF2B-205ENST00000471471 ZNF777Q9ULD5 760 aaPredicted RBP10.89□□□□□ -0.67
GTF2B-205ENST00000471471 MIA2Q96PC5 1412 aa10.89□□□□□ -0.67
GTF2B-205ENST00000471471 FAM135AQ9P2D6 1515 aa10.89□□□□□ -0.67
GTF2B-205ENST00000471471 ZC3H13Q5T200 1668 aaKnown RBP10.89□□□□□ -0.67
GTF2B-205ENST00000471471 ATXN8OSP0DMR3 200 aa10.88□□□□□ -0.67
GTF2B-205ENST00000471471 KIAA1107Q9UPP5 1409 aa10.88□□□□□ -0.67
GTF2B-205ENST00000471471 FXR2P51116 673 aaKnown RBP eCLIP10.87□□□□□ -0.67
GTF2B-205ENST00000471471 GPATCH8Q9UKJ3 1502 aaKnown RBP10.87□□□□□ -0.67
GTF2B-205ENST00000471471 ADGBQ8N7X0 1667 aa10.86□□□□□ -0.67
GTF2B-205ENST00000471471 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
GTF2B-205ENST00000471471 ROBO1Q9Y6N7 1651 aa10.85□□□□□ -0.67
GTF2B-205ENST00000471471 KDM5DQ9BY66 1539 aa10.85□□□□□ -0.67
GTF2B-205ENST00000471471 EEA1Q15075 1411 aa10.84□□□□□ -0.67
GTF2B-205ENST00000471471 ZBTB22O15209 634 aa10.84□□□□□ -0.67
GTF2B-205ENST00000471471 TRIM52Q96A61 297 aa10.84□□□□□ -0.67
GTF2B-205ENST00000471471 DHX29Q7Z478 1369 aaKnown RBP10.83□□□□□ -0.68
GTF2B-205ENST00000471471 PLEKHH2Q8IVE3 1493 aa10.82□□□□□ -0.68
GTF2B-205ENST00000471471 LRP6O75581 1613 aa10.82□□□□□ -0.68
GTF2B-205ENST00000471471 JCADQ9P266 1359 aa10.81□□□□□ -0.68
GTF2B-205ENST00000471471 MAP3K1Q13233 1512 aa10.81□□□□□ -0.68
GTF2B-205ENST00000471471 WASHC2CQ9Y4E1 1318 aa10.81□□□□□ -0.68
GTF2B-205ENST00000471471 CCDC18Q5T9S5 1454 aa10.81□□□□□ -0.68
GTF2B-205ENST00000471471 SCAF11Q99590 1463 aaKnown RBP10.81□□□□□ -0.68
GTF2B-205ENST00000471471 TMEM94Q12767 1356 aa10.8□□□□□ -0.68
GTF2B-205ENST00000471471 KIF3BO15066 747 aa10.8□□□□□ -0.68
GTF2B-205ENST00000471471 LTKP29376 864 aa10.8□□□□□ -0.68
GTF2B-205ENST00000471471 MBD5Q9P267 1494 aa10.8□□□□□ -0.68
GTF2B-205ENST00000471471 RTEL1-TNFRSF6BF6WH68 1400 aa10.79□□□□□ -0.68
GTF2B-205ENST00000471471 CASKIN1Q8WXD9 1431 aa10.79□□□□□ -0.68
GTF2B-205ENST00000471471 ZNF772Q68DY9 489 aaPredicted RBP10.79□□□□□ -0.68
GTF2B-205ENST00000471471 CFDP1Q9UEE9 299 aaPredicted RBP10.78□□□□□ -0.68
GTF2B-205ENST00000471471 NCOA2Q15596 1464 aa10.78□□□□□ -0.68
GTF2B-205ENST00000471471 CDK12Q9NYV4 1490 aaPredicted RBP10.78□□□□□ -0.68
GTF2B-205ENST00000471471 ARHGAP23Q9P227 1491 aa10.78□□□□□ -0.68
GTF2B-205ENST00000471471 ZNF644Q9H582 1327 aaPredicted RBP10.78□□□□□ -0.68
GTF2B-205ENST00000471471 PHLPP1O60346 1717 aa10.78□□□□□ -0.68
GTF2B-205ENST00000471471 LRRC9Q6ZRR7 1453 aa10.77□□□□□ -0.69
GTF2B-205ENST00000471471 RXRBP28702 533 aa10.77□□□□□ -0.69
GTF2B-205ENST00000471471 UBR1Q8IWV7 1749 aa10.77□□□□□ -0.69
GTF2B-205ENST00000471471 COL16A1Q07092 1604 aaPredicted RBP10.76□□□□□ -0.69
GTF2B-205ENST00000471471 SLIT1O75093 1534 aa10.76□□□□□ -0.69
GTF2B-205ENST00000471471 SPDYE2BA6NHP3 402 aa10.76□□□□□ -0.69
GTF2B-205ENST00000471471 SPDYE6P0CI01 402 aa10.76□□□□□ -0.69
GTF2B-205ENST00000471471 SPDYE2Q495Y8 402 aa10.76□□□□□ -0.69
GTF2B-205ENST00000471471 RBM33Q96EV2 1170 aaKnown RBP10.76□□□□□ -0.69
GTF2B-205ENST00000471471 ERVK-7P63135 1459 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms