RNA–Protein interactions for RNA: ENST00000471158.1

RFT1-204, Transcript of RFT1 homolog, humanhuman

TSL 3

Gene RFT1, Length 924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-204ENST00000471158 MAGI2Q86UL8 1455 aa17.44■□□□□ 0.38
RFT1-204ENST00000471158 NEUROD1Q13562 356 aa17.43■□□□□ 0.38
RFT1-204ENST00000471158 A2MP01023 1474 aa17.43■□□□□ 0.38
RFT1-204ENST00000471158 PKD2Q13563 968 aa17.42■□□□□ 0.38
RFT1-204ENST00000471158 SIN3AQ96ST3 1273 aa17.42■□□□□ 0.38
RFT1-204ENST00000471158 FAM135AQ9P2D6 1515 aa17.42■□□□□ 0.38
RFT1-204ENST00000471158 ANKRD30BQ9BXX2 1392 aa17.41■□□□□ 0.38
RFT1-204ENST00000471158 IQGAP3Q86VI3 1631 aa17.41■□□□□ 0.38
RFT1-204ENST00000471158 ZMYM4Q5VZL5 1548 aa17.41■□□□□ 0.38
RFT1-204ENST00000471158 KANK1Q14678 1352 aa17.4■□□□□ 0.38
RFT1-204ENST00000471158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.4■□□□□ 0.38
RFT1-204ENST00000471158 DEPDC5O75140 1603 aa17.39■□□□□ 0.37
RFT1-204ENST00000471158 TONSLQ96HA7 1378 aa17.39■□□□□ 0.37
RFT1-204ENST00000471158 FRMPD1Q5SYB0 1578 aa17.38■□□□□ 0.37
RFT1-204ENST00000471158 KIF3BO15066 747 aa17.38■□□□□ 0.37
RFT1-204ENST00000471158 ABCA6Q8N139 1617 aa17.36■□□□□ 0.37
RFT1-204ENST00000471158 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
RFT1-204ENST00000471158 DIP2CQ9Y2E4 1556 aa17.35■□□□□ 0.37
RFT1-204ENST00000471158 RNF17Q9BXT8 1623 aaKnown RBP17.33■□□□□ 0.37
RFT1-204ENST00000471158 PRDM15P57071 1507 aaPredicted RBP17.33■□□□□ 0.37
RFT1-204ENST00000471158 RPRD2Q5VT52 1461 aaKnown RBP17.33■□□□□ 0.37
RFT1-204ENST00000471158 TRHP20396 242 aaPredicted RBP17.32■□□□□ 0.36
RFT1-204ENST00000471158 VWDEQ8N2E2 1590 aa17.32■□□□□ 0.36
RFT1-204ENST00000471158 ATP10AO60312 1499 aa17.31■□□□□ 0.36
RFT1-204ENST00000471158 PPP1R15AO75807 674 aaPredicted RBP17.3■□□□□ 0.36
RFT1-204ENST00000471158 TET3O43151 1660 aa17.29■□□□□ 0.36
RFT1-204ENST00000471158 REREQ9P2R6 1566 aa17.29■□□□□ 0.36
RFT1-204ENST00000471158 YEATS2Q9ULM3 1422 aa17.29■□□□□ 0.36
RFT1-204ENST00000471158 MROH1Q8NDA8 1641 aa17.28■□□□□ 0.36
RFT1-204ENST00000471158 LMTK2Q8IWU2 1503 aa17.27■□□□□ 0.36
RFT1-204ENST00000471158 MSH5O43196 834 aa17.26■□□□□ 0.35
RFT1-204ENST00000471158 COL17A1Q9UMD9 1497 aaPredicted RBP17.25■□□□□ 0.35
RFT1-204ENST00000471158 CCDC144AA2RUR9 1427 aa17.25■□□□□ 0.35
RFT1-204ENST00000471158 AGLP35573 1532 aa17.25■□□□□ 0.35
RFT1-204ENST00000471158 GGT6Q6P531 493 aa17.24■□□□□ 0.35
RFT1-204ENST00000471158 PPP6R1Q9UPN7 881 aa17.24■□□□□ 0.35
RFT1-204ENST00000471158 ARHGEF40Q8TER5 1519 aa17.24■□□□□ 0.35
RFT1-204ENST00000471158 E9PCH4 1651 aa17.23■□□□□ 0.35
RFT1-204ENST00000471158 L3MBTL2Q969R5 705 aa17.22■□□□□ 0.35
RFT1-204ENST00000471158 WASHC2CQ9Y4E1 1318 aa17.21■□□□□ 0.35
RFT1-204ENST00000471158 ZNF316A6NFI3 1004 aaPredicted RBP17.21■□□□□ 0.35
RFT1-204ENST00000471158 EFCAB6Q5THR3 1501 aa17.21■□□□□ 0.34
RFT1-204ENST00000471158 PTPRTO14522 1441 aa17.21■□□□□ 0.34
RFT1-204ENST00000471158 ZC3H13Q5T200 1668 aaKnown RBP17.2■□□□□ 0.34
RFT1-204ENST00000471158 PLA2R1Q13018 1463 aa17.2■□□□□ 0.34
RFT1-204ENST00000471158 ABCC3O15438 1527 aa17.19■□□□□ 0.34
RFT1-204ENST00000471158 TRPM2O94759 1503 aa17.19■□□□□ 0.34
RFT1-204ENST00000471158 CEP152O94986 1710 aa17.18■□□□□ 0.34
RFT1-204ENST00000471158 SPHKAPQ2M3C7 1700 aa17.18■□□□□ 0.34
RFT1-204ENST00000471158 ARHGAP31Q2M1Z3 1444 aa17.15■□□□□ 0.34
RFT1-204ENST00000471158 CAMSAP1Q5T5Y3 1602 aa17.14■□□□□ 0.33
RFT1-204ENST00000471158 STAC3Q96MF2 364 aa17.12■□□□□ 0.33
RFT1-204ENST00000471158 NPATQ14207 1427 aa17.12■□□□□ 0.33
RFT1-204ENST00000471158 CNTLNQ9NXG0 1405 aa17.12■□□□□ 0.33
RFT1-204ENST00000471158 NEURL4Q96JN8 1562 aa17.11■□□□□ 0.33
RFT1-204ENST00000471158 UHRF1BP1Q6BDS2 1440 aa17.1■□□□□ 0.33
RFT1-204ENST00000471158 ESF1Q9H501 851 aaKnown RBP17.09■□□□□ 0.33
RFT1-204ENST00000471158 DCAF11Q8TEB1 546 aa17.08■□□□□ 0.32
RFT1-204ENST00000471158 CLTCL1P53675 1640 aa17.07■□□□□ 0.32
RFT1-204ENST00000471158 SPATA31E1Q6ZUB1 1445 aa17.07■□□□□ 0.32
RFT1-204ENST00000471158 ARID4BQ4LE39 1312 aaPredicted RBP17.07■□□□□ 0.32
RFT1-204ENST00000471158 NOS1P29475 1434 aa17.06■□□□□ 0.32
RFT1-204ENST00000471158 RGL3Q3MIN7 710 aa17.05■□□□□ 0.32
RFT1-204ENST00000471158 KIF1BO60333 1816 aa17.05■□□□□ 0.32
RFT1-204ENST00000471158 NBPF8Q3BBV2 869 aa17.04■□□□□ 0.32
RFT1-204ENST00000471158 SLC52A1Q9NWF4 448 aa17.04■□□□□ 0.32
RFT1-204ENST00000471158 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
RFT1-204ENST00000471158 MLECQ14165 292 aa17.03■□□□□ 0.32
RFT1-204ENST00000471158 KDM2AQ9Y2K7 1162 aa17.03■□□□□ 0.32
RFT1-204ENST00000471158 CLTCQ00610 1675 aaKnown RBP17.02■□□□□ 0.32
RFT1-204ENST00000471158 EIF4G2P78344 907 aaKnown RBP eCLIP17.01■□□□□ 0.31
RFT1-204ENST00000471158 ZNF326Q5BKZ1 582 aaKnown RBP17.01■□□□□ 0.31
RFT1-204ENST00000471158 CFAP65Q6ZU64 1925 aaKnown RBP17.01■□□□□ 0.31
RFT1-204ENST00000471158 RALGAPBQ86X10 1494 aa17■□□□□ 0.31
RFT1-204ENST00000471158 PRAG1Q86YV5 1406 aa17■□□□□ 0.31
RFT1-204ENST00000471158 PREX1Q8TCU6 1659 aa17■□□□□ 0.31
RFT1-204ENST00000471158 RPGRIP1LQ68CZ1 1315 aa16.99■□□□□ 0.31
RFT1-204ENST00000471158 PIK3C2BO00750 1634 aa16.99■□□□□ 0.31
RFT1-204ENST00000471158 ADGRB3O60242 1522 aa16.98■□□□□ 0.31
RFT1-204ENST00000471158 ERVK-7P63135 1459 aa16.98■□□□□ 0.31
RFT1-204ENST00000471158 SYNMO15061 1565 aa16.98■□□□□ 0.31
RFT1-204ENST00000471158 UGGT1Q9NYU2 1555 aa16.98■□□□□ 0.31
RFT1-204ENST00000471158 DIEXFQ68CQ4 756 aaKnown RBP16.97■□□□□ 0.31
RFT1-204ENST00000471158 ZMYM3Q14202 1370 aa16.97■□□□□ 0.31
RFT1-204ENST00000471158 MROH2AA6NES4 1674 aa16.95■□□□□ 0.3
RFT1-204ENST00000471158 SPATA31D1Q6ZQQ2 1576 aa16.95■□□□□ 0.3
RFT1-204ENST00000471158 MYOM2P54296 1465 aa16.95■□□□□ 0.3
RFT1-204ENST00000471158 CHGAP10645 457 aaKnown RBP16.95■□□□□ 0.3
RFT1-204ENST00000471158 ROCK2O75116 1388 aaKnown RBP16.93■□□□□ 0.3
RFT1-204ENST00000471158 HSPA5P11021 654 aaKnown RBP16.93■□□□□ 0.3
RFT1-204ENST00000471158 IDI1Q13907 227 aa16.93■□□□□ 0.3
RFT1-204ENST00000471158 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
RFT1-204ENST00000471158 TRPM1Q7Z4N2 1603 aa16.92■□□□□ 0.3
RFT1-204ENST00000471158 FBXO31Q5XUX0 539 aaPredicted RBP16.92■□□□□ 0.3
RFT1-204ENST00000471158 MADDQ8WXG6 1647 aa16.91■□□□□ 0.3
RFT1-204ENST00000471158 GPRASP1Q5JY77 1395 aa16.9■□□□□ 0.3
RFT1-204ENST00000471158 IFT172Q9UG01 1749 aa16.9■□□□□ 0.3
RFT1-204ENST00000471158 LAMC1P11047 1609 aa16.9■□□□□ 0.3
RFT1-204ENST00000471158 USP47Q96K76 1375 aa16.89■□□□□ 0.3
RFT1-204ENST00000471158 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms