RNA–Protein interactions for RNA: ENST00000471014.1

CTNNB1-212, Transcript of catenin beta 1, humanhuman

TSL 3

Gene CTNNB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-212ENST00000471014 LRRC9Q6ZRR7 1453 aa20.35■□□□□ 0.85
CTNNB1-212ENST00000471014 WASHC2CQ9Y4E1 1318 aa20.34■□□□□ 0.85
CTNNB1-212ENST00000471014 A2ML1A8K2U0 1454 aa20.33■□□□□ 0.85
CTNNB1-212ENST00000471014 TNRQ92752 1358 aa20.33■□□□□ 0.84
CTNNB1-212ENST00000471014 DISP3Q9P2K9 1392 aa20.33■□□□□ 0.84
CTNNB1-212ENST00000471014 KDM5DQ9BY66 1539 aa20.32■□□□□ 0.84
CTNNB1-212ENST00000471014 TCOF1Q13428 1488 aaKnown RBP20.32■□□□□ 0.84
CTNNB1-212ENST00000471014 KANK4Q5T7N3 995 aaPredicted RBP20.32■□□□□ 0.84
CTNNB1-212ENST00000471014 ARHGEF5Q12774 1597 aa20.31■□□□□ 0.84
CTNNB1-212ENST00000471014 DNMT1P26358 1616 aaKnown RBP20.29■□□□□ 0.84
CTNNB1-212ENST00000471014 PZPP20742 1482 aa20.29■□□□□ 0.84
CTNNB1-212ENST00000471014 IQSEC2Q5JU85 1478 aa20.29■□□□□ 0.84
CTNNB1-212ENST00000471014 UBAP1LF5GYI3 381 aa20.28■□□□□ 0.84
CTNNB1-212ENST00000471014 FAM135AQ9P2D6 1515 aa20.24■□□□□ 0.83
CTNNB1-212ENST00000471014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.23■□□□□ 0.83
CTNNB1-212ENST00000471014 MYOM3Q5VTT5 1437 aa20.23■□□□□ 0.83
CTNNB1-212ENST00000471014 MIA2Q96PC5 1412 aa20.22■□□□□ 0.83
CTNNB1-212ENST00000471014 ILDR2Q71H61 639 aa20.22■□□□□ 0.83
CTNNB1-212ENST00000471014 MAST1Q9Y2H9 1570 aa20.21■□□□□ 0.83
CTNNB1-212ENST00000471014 ANKLE2Q86XL3 938 aa20.2■□□□□ 0.82
CTNNB1-212ENST00000471014 MAP3K1Q13233 1512 aa20.19■□□□□ 0.82
CTNNB1-212ENST00000471014 APLP2Q06481 763 aa20.19■□□□□ 0.82
CTNNB1-212ENST00000471014 THEMISQ8N1K5 641 aaPredicted RBP20.19■□□□□ 0.82
CTNNB1-212ENST00000471014 SPATA31D1Q6ZQQ2 1576 aa20.19■□□□□ 0.82
CTNNB1-212ENST00000471014 NEURL4Q96JN8 1562 aa20.19■□□□□ 0.82
CTNNB1-212ENST00000471014 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
CTNNB1-212ENST00000471014 POLR1AO95602 1720 aaPredicted RBP20.19■□□□□ 0.82
CTNNB1-212ENST00000471014 NLRP1Q9C000 1473 aa20.18■□□□□ 0.82
CTNNB1-212ENST00000471014 ABCC3O15438 1527 aa20.18■□□□□ 0.82
CTNNB1-212ENST00000471014 UGGT1Q9NYU2 1555 aa20.18■□□□□ 0.82
CTNNB1-212ENST00000471014 RNF17Q9BXT8 1623 aaKnown RBP20.17■□□□□ 0.82
CTNNB1-212ENST00000471014 PIP4K2BP78356 416 aa20.14■□□□□ 0.81
CTNNB1-212ENST00000471014 RRP7BPQ9NSQ0 103 aa20.14■□□□□ 0.81
CTNNB1-212ENST00000471014 EIF2AK4Q9P2K8 1649 aaKnown RBP20.13■□□□□ 0.81
CTNNB1-212ENST00000471014 SHANK2Q9UPX8 1470 aa20.13■□□□□ 0.81
CTNNB1-212ENST00000471014 NPHP4O75161 1426 aaPredicted RBP20.13■□□□□ 0.81
CTNNB1-212ENST00000471014 KIF15Q9NS87 1388 aa20.13■□□□□ 0.81
CTNNB1-212ENST00000471014 ZC3H13Q5T200 1668 aaKnown RBP20.13■□□□□ 0.81
CTNNB1-212ENST00000471014 MROH1Q8NDA8 1641 aa20.13■□□□□ 0.81
CTNNB1-212ENST00000471014 DUOX2Q9NRD8 1548 aa20.12■□□□□ 0.81
CTNNB1-212ENST00000471014 ERVK-7P63135 1459 aa20.12■□□□□ 0.81
CTNNB1-212ENST00000471014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.12■□□□□ 0.812e-8■□□□□ 10.9
CTNNB1-212ENST00000471014 CEP152O94986 1710 aa20.12■□□□□ 0.81
CTNNB1-212ENST00000471014 CPS1P31327 1500 aa20.11■□□□□ 0.81
CTNNB1-212ENST00000471014 ABCC5O15440 1437 aa20.1■□□□□ 0.81
CTNNB1-212ENST00000471014 PTPN23Q9H3S7 1636 aa20.1■□□□□ 0.81
CTNNB1-212ENST00000471014 CHIC2Q9UKJ5 165 aa20.08■□□□□ 0.81
CTNNB1-212ENST00000471014 VWDEQ8N2E2 1590 aa20.08■□□□□ 0.8
CTNNB1-212ENST00000471014 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.8
CTNNB1-212ENST00000471014 TOM1O60784 492 aa20.07■□□□□ 0.8
CTNNB1-212ENST00000471014 MED14O60244 1454 aa20.06■□□□□ 0.8
CTNNB1-212ENST00000471014 DEPDC5O75140 1603 aa20.06■□□□□ 0.8
CTNNB1-212ENST00000471014 DAPK1P53355 1430 aa20.06■□□□□ 0.8
CTNNB1-212ENST00000471014 CROCC2H7BZ55 1655 aa20.06■□□□□ 0.8
CTNNB1-212ENST00000471014 IQGAP1P46940 1657 aa20.06■□□□□ 0.8
CTNNB1-212ENST00000471014 FGD6Q6ZV73 1430 aa20.05■□□□□ 0.8
CTNNB1-212ENST00000471014 SOCS7O14512 581 aa20.05■□□□□ 0.8
CTNNB1-212ENST00000471014 HSPA1LP34931 641 aa20.05■□□□□ 0.8
CTNNB1-212ENST00000471014 ERBINQ96RT1 1412 aa20.04■□□□□ 0.8
CTNNB1-212ENST00000471014 SENP3Q9H4L4 574 aaPredicted RBP20.04■□□□□ 0.8
CTNNB1-212ENST00000471014 PRDM15P57071 1507 aaPredicted RBP20.03■□□□□ 0.8
CTNNB1-212ENST00000471014 KANK1Q14678 1352 aa20.01■□□□□ 0.79
CTNNB1-212ENST00000471014 UBR1Q8IWV7 1749 aa20■□□□□ 0.79
CTNNB1-212ENST00000471014 TXNDC2Q86VQ3 553 aa20■□□□□ 0.79
CTNNB1-212ENST00000471014 SCAF11Q99590 1463 aaKnown RBP19.99■□□□□ 0.79
CTNNB1-212ENST00000471014 ANKRD30AQ9BXX3 1397 aa19.99■□□□□ 0.79
CTNNB1-212ENST00000471014 LTKP29376 864 aa19.99■□□□□ 0.79
CTNNB1-212ENST00000471014 STAG3Q9UJ98 1225 aa19.99■□□□□ 0.79
CTNNB1-212ENST00000471014 FAM50AQ14320 339 aaKnown RBP19.98■□□□□ 0.79
CTNNB1-212ENST00000471014 ARHGAP31Q2M1Z3 1444 aa19.98■□□□□ 0.79
CTNNB1-212ENST00000471014 STRCP1A6NGW2 1772 aa19.96■□□□□ 0.79
CTNNB1-212ENST00000471014 LRRC7Q96NW7 1537 aa19.96■□□□□ 0.79
CTNNB1-212ENST00000471014 EID1Q9Y6B2 187 aa19.95■□□□□ 0.78
CTNNB1-212ENST00000471014 PIK3C2BO00750 1634 aa19.94■□□□□ 0.78
CTNNB1-212ENST00000471014 ARHGAP23Q9P227 1491 aa19.93■□□□□ 0.78
CTNNB1-212ENST00000471014 ALKQ9UM73 1620 aa19.93■□□□□ 0.78
CTNNB1-212ENST00000471014 SLIT1O75093 1534 aa19.92■□□□□ 0.78
CTNNB1-212ENST00000471014 IDI1Q13907 227 aa19.91■□□□□ 0.78
CTNNB1-212ENST00000471014 TMEM2Q9UHN6 1383 aa19.91■□□□□ 0.78
CTNNB1-212ENST00000471014 SYNMO15061 1565 aa19.91■□□□□ 0.78
CTNNB1-212ENST00000471014 MED1Q15648 1581 aaPredicted RBP19.91■□□□□ 0.78
CTNNB1-212ENST00000471014 EFCAB6Q5THR3 1501 aa19.88■□□□□ 0.77
CTNNB1-212ENST00000471014 LMTK2Q8IWU2 1503 aa19.88■□□□□ 0.77
CTNNB1-212ENST00000471014 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
CTNNB1-212ENST00000471014 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
CTNNB1-212ENST00000471014 BCANQ96GW7 911 aa19.85■□□□□ 0.77
CTNNB1-212ENST00000471014 SLC26A8Q96RN1 970 aa19.85■□□□□ 0.77
CTNNB1-212ENST00000471014 ANKRD50Q9ULJ7 1429 aa19.85■□□□□ 0.77
CTNNB1-212ENST00000471014 NOS1P29475 1434 aa19.83■□□□□ 0.76
CTNNB1-212ENST00000471014 RBM33Q96EV2 1170 aaKnown RBP19.82■□□□□ 0.76
CTNNB1-212ENST00000471014 ADGRB3O60242 1522 aa19.81■□□□□ 0.76
CTNNB1-212ENST00000471014 TMEM94Q12767 1356 aa19.8■□□□□ 0.76
CTNNB1-212ENST00000471014 SLC52A1Q9NWF4 448 aa19.79■□□□□ 0.76
CTNNB1-212ENST00000471014 PROSER2Q86WR7 435 aaPredicted RBP19.78■□□□□ 0.76
CTNNB1-212ENST00000471014 KDM5AP29375 1690 aaKnown RBP19.78■□□□□ 0.76
CTNNB1-212ENST00000471014 XIRP1Q702N8 1843 aaKnown RBP19.77■□□□□ 0.76
CTNNB1-212ENST00000471014 PPP1R15AO75807 674 aaPredicted RBP19.77■□□□□ 0.76
CTNNB1-212ENST00000471014 CHGAP10645 457 aaKnown RBP19.77■□□□□ 0.76
CTNNB1-212ENST00000471014 KCNA6P17658 529 aa19.77■□□□□ 0.76
CTNNB1-212ENST00000471014 ITGAEP38570 1179 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms