RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 PTGDRQ13258 359 aa8.23□□□□□ -1.09
PRPF3-204ENST00000470824 IL27Q8NEV9 243 aa8.23□□□□□ -1.09
PRPF3-204ENST00000470824 HS3ST6Q96QI5 342 aa8.23□□□□□ -1.09
PRPF3-204ENST00000470824 PCDHGA4Q9Y5G9 962 aa8.23□□□□□ -1.09
PRPF3-204ENST00000470824 FECHP22830 423 aa8.21□□□□□ -1.1
PRPF3-204ENST00000470824 EN1Q05925 392 aaPredicted RBP8.21□□□□□ -1.1
PRPF3-204ENST00000470824 C14orf37Q86TY3 774 aa8.21□□□□□ -1.1
PRPF3-204ENST00000470824 MAP3K7O43318 606 aa8.2□□□□□ -1.1
PRPF3-204ENST00000470824 AMHR2Q16671 573 aa8.2□□□□□ -1.1
PRPF3-204ENST00000470824 TYW1BQ6NUM6 668 aa8.2□□□□□ -1.1
PRPF3-204ENST00000470824 ZNF710Q8N1W2 664 aa8.19□□□□□ -1.1
PRPF3-204ENST00000470824 PCDHGA10Q9Y5H3 936 aa8.19□□□□□ -1.1
PRPF3-204ENST00000470824 POTEB3A0JP26 581 aa8.18□□□□□ -1.1
PRPF3-204ENST00000470824 POTEBQ6S5H4 581 aa8.18□□□□□ -1.1
PRPF3-204ENST00000470824 FBXW7Q969H0 707 aa8.18□□□□□ -1.1
PRPF3-204ENST00000470824 RBM33Q96EV2 1170 aaKnown RBP8.18□□□□□ -1.1
PRPF3-204ENST00000470824 JPH4Q96JJ6 628 aa8.17□□□□□ -1.1
PRPF3-204ENST00000470824 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
PRPF3-204ENST00000470824 KRTAP3-2Q9BYR7 98 aa8.17□□□□□ -1.1
PRPF3-204ENST00000470824 NPDC1Q9NQX5 325 aaPredicted RBP8.17□□□□□ -1.1
PRPF3-204ENST00000470824 KDM4FA0A1W2PPD8 638 aa8.16□□□□□ -1.1
PRPF3-204ENST00000470824 PARP9Q8IXQ6 854 aa8.16□□□□□ -1.1
PRPF3-204ENST00000470824 DDRGK1Q96HY6 314 aa8.16□□□□□ -1.1
PRPF3-204ENST00000470824 CDHR5Q9HBB8 845 aa8.16□□□□□ -1.1
PRPF3-204ENST00000470824 HOXB3P14651 431 aaPredicted RBP8.15□□□□□ -1.1
PRPF3-204ENST00000470824 TTLL12Q14166 644 aaPredicted RBP8.15□□□□□ -1.1
PRPF3-204ENST00000470824 DOK7Q18PE1 504 aa8.15□□□□□ -1.1
PRPF3-204ENST00000470824 FAM117AQ9C073 453 aa8.15□□□□□ -1.1
PRPF3-204ENST00000470824 RIMBP2O15034 1052 aa8.14□□□□□ -1.11
PRPF3-204ENST00000470824 FOSBP53539 338 aa8.14□□□□□ -1.11
PRPF3-204ENST00000470824 TSR1Q2NL82 804 aaKnown RBP8.13□□□□□ -1.11
PRPF3-204ENST00000470824 CERKQ8TCT0 537 aa8.13□□□□□ -1.11
PRPF3-204ENST00000470824 ERBB3P21860 1342 aa8.12□□□□□ -1.11
PRPF3-204ENST00000470824 ZNF454Q8N9F8 522 aa8.12□□□□□ -1.11
PRPF3-204ENST00000470824 ZDHHC16Q969W1 377 aa8.12□□□□□ -1.11
PRPF3-204ENST00000470824 ZSWIM6Q9HCJ5 1215 aa8.12□□□□□ -1.11
PRPF3-204ENST00000470824 HOXB1P14653 301 aaPredicted RBP8.11□□□□□ -1.11
PRPF3-204ENST00000470824 ARSIQ5FYB1 569 aa8.11□□□□□ -1.11
PRPF3-204ENST00000470824 C6orf132Q5T0Z8 1188 aa8.11□□□□□ -1.11
PRPF3-204ENST00000470824 PLEKHG3A1L390 1219 aa8.1□□□□□ -1.11
PRPF3-204ENST00000470824 NUDT7P0C024 238 aa8.1□□□□□ -1.11
PRPF3-204ENST00000470824 OATP04181 439 aa8.09□□□□□ -1.11
PRPF3-204ENST00000470824 CLCN1P35523 988 aa8.09□□□□□ -1.11
PRPF3-204ENST00000470824 GIGYF2Q6Y7W6 1299 aaKnown RBP8.09□□□□□ -1.11
PRPF3-204ENST00000470824 GPR153Q6NV75 609 aa8.08□□□□□ -1.12
PRPF3-204ENST00000470824 KHSRPQ92945 711 aaKnown RBP eCLIP8.08□□□□□ -1.12
PRPF3-204ENST00000470824 VARS2Q5ST30 1063 aaKnown RBP8.07□□□□□ -1.12
PRPF3-204ENST00000470824 MDM2Q00987 491 aaPredicted RBP8.06□□□□□ -1.12
PRPF3-204ENST00000470824 PADI6Q6TGC4 694 aa8.06□□□□□ -1.12
PRPF3-204ENST00000470824 REPIN1Q9BWE0 567 aaKnown RBP8.06□□□□□ -1.12
PRPF3-204ENST00000470824 ADAM33Q9BZ11 813 aa8.06□□□□□ -1.12
PRPF3-204ENST00000470824 GOPCQ9HD26 462 aa8.06□□□□□ -1.12
PRPF3-204ENST00000470824 GPCPD1Q9NPB8 672 aa8.06□□□□□ -1.12
PRPF3-204ENST00000470824 RBM27Q9P2N5 1060 aaKnown RBP8.06□□□□□ -1.12
PRPF3-204ENST00000470824 MS4A1P11836 297 aa8.05□□□□□ -1.12
PRPF3-204ENST00000470824 TMUB1Q9BVT8 246 aa8.05□□□□□ -1.12
PRPF3-204ENST00000470824 PSDA5PKW4 1024 aaPredicted RBP8.04□□□□□ -1.12
PRPF3-204ENST00000470824 METTL3Q86U44 580 aaKnown RBP8.04□□□□□ -1.12
PRPF3-204ENST00000470824 PHOX2BQ99453 314 aa8.04□□□□□ -1.12
PRPF3-204ENST00000470824 ADGRG1Q9Y653 693 aa8.04□□□□□ -1.12
PRPF3-204ENST00000470824 SSTR3P32745 418 aaPredicted RBP8.03□□□□□ -1.12
PRPF3-204ENST00000470824 PRSS12P56730 875 aa8.03□□□□□ -1.12
PRPF3-204ENST00000470824 FAM161AQ3B820 660 aa8.03□□□□□ -1.12
PRPF3-204ENST00000470824 PPP4R3BQ5MIZ7 849 aa8.03□□□□□ -1.12
PRPF3-204ENST00000470824 TTC13Q8NBP0 860 aa8.03□□□□□ -1.12
PRPF3-204ENST00000470824 LHX6Q9UPM6 363 aa8.03□□□□□ -1.12
PRPF3-204ENST00000470824 PXYLP1Q8TE99 480 aa8.02□□□□□ -1.13
PRPF3-204ENST00000470824 CDCA7LQ96GN5 454 aa8.02□□□□□ -1.13
PRPF3-204ENST00000470824 RBM46Q8TBY0 533 aaKnown RBP8.01□□□□□ -1.13
PRPF3-204ENST00000470824 PCMTD1Q96MG8 357 aaPredicted RBP8.01□□□□□ -1.13
PRPF3-204ENST00000470824 RSPH6AQ9H0K4 717 aa8.01□□□□□ -1.13
PRPF3-204ENST00000470824 RNF166Q96A37 237 aaPredicted RBP8□□□□□ -1.13
PRPF3-204ENST00000470824 BCL2L12Q9HB09 334 aa8□□□□□ -1.13
PRPF3-204ENST00000470824 FAM217BQ9NTX9 383 aaPredicted RBP8□□□□□ -1.13
PRPF3-204ENST00000470824 SH3D19Q5HYK7 790 aa7.99□□□□□ -1.13
PRPF3-204ENST00000470824 BEGAINQ9BUH8 593 aa7.99□□□□□ -1.13
PRPF3-204ENST00000470824 PTPREP23469 700 aa7.98□□□□□ -1.13
PRPF3-204ENST00000470824 ZMYND15Q9H091 742 aa7.98□□□□□ -1.13
PRPF3-204ENST00000470824 NLRP7Q8WX94 980 aa7.97□□□□□ -1.13
PRPF3-204ENST00000470824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.96□□□□□ -1.14
PRPF3-204ENST00000470824 PPP1R3GB7ZBB8 358 aa7.96□□□□□ -1.14
PRPF3-204ENST00000470824 SUPT5HO00267 1087 aaKnown RBP7.96□□□□□ -1.14
PRPF3-204ENST00000470824 COL9A1P20849 921 aa7.96□□□□□ -1.14
PRPF3-204ENST00000470824 FLIIQ13045 1269 aa7.96□□□□□ -1.14
PRPF3-204ENST00000470824 SKIV2LQ15477 1246 aaKnown RBP7.96□□□□□ -1.14
PRPF3-204ENST00000470824 ZNF687Q8N1G0 1237 aa7.96□□□□□ -1.14
PRPF3-204ENST00000470824 MYT1LQ9UL68 1186 aa7.96□□□□□ -1.14
PRPF3-204ENST00000470824 FAM198AQ9UFP1 575 aa7.95□□□□□ -1.14
PRPF3-204ENST00000470824 RCCD1A6NED2 376 aa7.94□□□□□ -1.14
PRPF3-204ENST00000470824 PACS2Q86VP3 889 aa7.94□□□□□ -1.14
PRPF3-204ENST00000470824 ATP1B4Q9UN42 357 aaPredicted RBP7.94□□□□□ -1.14
PRPF3-204ENST00000470824 DIXDC1Q155Q3 683 aa7.93□□□□□ -1.14
PRPF3-204ENST00000470824 KCNH8Q96L42 1107 aa7.93□□□□□ -1.14
PRPF3-204ENST00000470824 ARXQ96QS3 562 aa7.93□□□□□ -1.14
PRPF3-204ENST00000470824 EYA1Q99502 592 aa7.93□□□□□ -1.14
PRPF3-204ENST00000470824 TSKSQ9UJT2 592 aa7.93□□□□□ -1.14
PRPF3-204ENST00000470824 TRIM6-TRIM34B2RNG4 842 aa7.92□□□□□ -1.14
PRPF3-204ENST00000470824 NBPF26B4DH59 902 aa7.92□□□□□ -1.14
PRPF3-204ENST00000470824 ANKRD13DQ6ZTN6 518 aa7.92□□□□□ -1.14
PRPF3-204ENST00000470824 NUDT18Q6ZVK8 323 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms