RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 FAM135AQ9P2D6 1515 aa22.1■■□□□ 1.13
SEMA3F-208ENST00000470737 KDM5DQ9BY66 1539 aa22.09■■□□□ 1.13
SEMA3F-208ENST00000470737 DNMT1P26358 1616 aaKnown RBP22.09■■□□□ 1.13
SEMA3F-208ENST00000470737 UBAP1LF5GYI3 381 aa22.07■■□□□ 1.12
SEMA3F-208ENST00000470737 TSPY4P0CV99 314 aa22.07■■□□□ 1.12
SEMA3F-208ENST00000470737 TSPY10P0CW01 314 aa22.07■■□□□ 1.12
SEMA3F-208ENST00000470737 TNRQ92752 1358 aa22.07■■□□□ 1.12
SEMA3F-208ENST00000470737 WASHC2CQ9Y4E1 1318 aa22.06■■□□□ 1.12
SEMA3F-208ENST00000470737 POLR1AO95602 1720 aaPredicted RBP22.06■■□□□ 1.12
SEMA3F-208ENST00000470737 ARHGEF5Q12774 1597 aa22.05■■□□□ 1.12
SEMA3F-208ENST00000470737 PZPP20742 1482 aa22.05■■□□□ 1.12
SEMA3F-208ENST00000470737 FBXO31Q5XUX0 539 aaPredicted RBP22.03■■□□□ 1.12
SEMA3F-208ENST00000470737 ILDR2Q71H61 639 aa22.03■■□□□ 1.12
SEMA3F-208ENST00000470737 VPS8Q8N3P4 1428 aa21.98■■□□□ 1.11
SEMA3F-208ENST00000470737 LRRC9Q6ZRR7 1453 aa21.98■■□□□ 1.11
SEMA3F-208ENST00000470737 SOCS7O14512 581 aa21.98■■□□□ 1.11
SEMA3F-208ENST00000470737 NLRP1Q9C000 1473 aa21.97■■□□□ 1.11
SEMA3F-208ENST00000470737 ANKLE2Q86XL3 938 aa21.97■■□□□ 1.11
SEMA3F-208ENST00000470737 THEMISQ8N1K5 641 aaPredicted RBP21.97■■□□□ 1.11
SEMA3F-208ENST00000470737 MIA2Q96PC5 1412 aa21.97■■□□□ 1.11
SEMA3F-208ENST00000470737 CPS1P31327 1500 aa21.96■■□□□ 1.11
SEMA3F-208ENST00000470737 NEURL4Q96JN8 1562 aa21.95■■□□□ 1.11
SEMA3F-208ENST00000470737 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.95■■□□□ 1.1
SEMA3F-208ENST00000470737 UGGT1Q9NYU2 1555 aa21.95■■□□□ 1.1
SEMA3F-208ENST00000470737 MAST1Q9Y2H9 1570 aa21.95■■□□□ 1.1
SEMA3F-208ENST00000470737 ZC3H13Q5T200 1668 aaKnown RBP21.95■■□□□ 1.1
SEMA3F-208ENST00000470737 RNF17Q9BXT8 1623 aaKnown RBP21.94■■□□□ 1.1
SEMA3F-208ENST00000470737 SCAF1Q9H7N4 1312 aaKnown RBP21.93■■□□□ 1.1
SEMA3F-208ENST00000470737 EIF2AK4Q9P2K8 1649 aaKnown RBP21.92■■□□□ 1.1
SEMA3F-208ENST00000470737 SHANK2Q9UPX8 1470 aa21.92■■□□□ 1.1
SEMA3F-208ENST00000470737 TOM1O60784 492 aa21.9■■□□□ 1.1
SEMA3F-208ENST00000470737 DEPDC5O75140 1603 aa21.89■■□□□ 1.09
SEMA3F-208ENST00000470737 ABCC3O15438 1527 aa21.89■■□□□ 1.09
SEMA3F-208ENST00000470737 MAP3K1Q13233 1512 aa21.89■■□□□ 1.09
SEMA3F-208ENST00000470737 NPHP4O75161 1426 aaPredicted RBP21.89■■□□□ 1.09
SEMA3F-208ENST00000470737 MYOM3Q5VTT5 1437 aa21.88■■□□□ 1.09
SEMA3F-208ENST00000470737 LOC105371045A0A1W2PR82 267 aa21.87■■□□□ 1.09
SEMA3F-208ENST00000470737 PIP4K2BP78356 416 aa21.87■■□□□ 1.09
SEMA3F-208ENST00000470737 MED14O60244 1454 aa21.86■■□□□ 1.09
SEMA3F-208ENST00000470737 IQGAP1P46940 1657 aa21.85■■□□□ 1.09
SEMA3F-208ENST00000470737 CFAP65Q6ZU64 1925 aaKnown RBP21.85■■□□□ 1.09
SEMA3F-208ENST00000470737 KANK4Q5T7N3 995 aaPredicted RBP21.85■■□□□ 1.09
SEMA3F-208ENST00000470737 CEP152O94986 1710 aa21.85■■□□□ 1.09
SEMA3F-208ENST00000470737 VWDEQ8N2E2 1590 aa21.84■■□□□ 1.09
SEMA3F-208ENST00000470737 DUOX2Q9NRD8 1548 aa21.84■■□□□ 1.09
SEMA3F-208ENST00000470737 ERVK-7P63135 1459 aa21.83■■□□□ 1.09
SEMA3F-208ENST00000470737 MROH1Q8NDA8 1641 aa21.81■■□□□ 1.08
SEMA3F-208ENST00000470737 HSPA1LP34931 641 aa21.81■■□□□ 1.08
SEMA3F-208ENST00000470737 APLP2Q06481 763 aa21.81■■□□□ 1.08
SEMA3F-208ENST00000470737 KIF15Q9NS87 1388 aa21.77■■□□□ 1.08
SEMA3F-208ENST00000470737 CROCC2H7BZ55 1655 aa21.77■■□□□ 1.08
SEMA3F-208ENST00000470737 UBR1Q8IWV7 1749 aa21.77■■□□□ 1.08
SEMA3F-208ENST00000470737 ERBINQ96RT1 1412 aa21.75■■□□□ 1.07
SEMA3F-208ENST00000470737 PTPN23Q9H3S7 1636 aa21.75■■□□□ 1.07
SEMA3F-208ENST00000470737 PRDM15P57071 1507 aaPredicted RBP21.75■■□□□ 1.07
SEMA3F-208ENST00000470737 SYNMO15061 1565 aa21.74■■□□□ 1.07
SEMA3F-208ENST00000470737 SCAF11Q99590 1463 aaKnown RBP21.73■■□□□ 1.07
SEMA3F-208ENST00000470737 RRP7BPQ9NSQ0 103 aa21.73■■□□□ 1.07
SEMA3F-208ENST00000470737 MED1Q15648 1581 aaPredicted RBP21.73■■□□□ 1.07
SEMA3F-208ENST00000470737 ARHGAP31Q2M1Z3 1444 aa21.72■■□□□ 1.07
SEMA3F-208ENST00000470737 STRCP1A6NGW2 1772 aa21.72■■□□□ 1.07
SEMA3F-208ENST00000470737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.72■■□□□ 1.07
SEMA3F-208ENST00000470737 KANK1Q14678 1352 aa21.72■■□□□ 1.07
SEMA3F-208ENST00000470737 ABCC5O15440 1437 aa21.72■■□□□ 1.07
SEMA3F-208ENST00000470737 LRRC7Q96NW7 1537 aa21.7■■□□□ 1.07
SEMA3F-208ENST00000470737 EID1Q9Y6B2 187 aa21.7■■□□□ 1.06
SEMA3F-208ENST00000470737 TXNDC2Q86VQ3 553 aa21.69■■□□□ 1.06
SEMA3F-208ENST00000470737 STAG3Q9UJ98 1225 aa21.69■■□□□ 1.06
SEMA3F-208ENST00000470737 DAPK1P53355 1430 aa21.69■■□□□ 1.06
SEMA3F-208ENST00000470737 SLIT1O75093 1534 aa21.68■■□□□ 1.06
SEMA3F-208ENST00000470737 ALKQ9UM73 1620 aa21.67■■□□□ 1.06
SEMA3F-208ENST00000470737 ARHGAP23Q9P227 1491 aa21.67■■□□□ 1.06
SEMA3F-208ENST00000470737 FGD6Q6ZV73 1430 aa21.66■■□□□ 1.06
SEMA3F-208ENST00000470737 PHF23Q9BUL5 403 aaPredicted RBP21.66■■□□□ 1.06
SEMA3F-208ENST00000470737 PIK3C2BO00750 1634 aa21.66■■□□□ 1.06
SEMA3F-208ENST00000470737 ANKRD30AQ9BXX3 1397 aa21.65■■□□□ 1.06
SEMA3F-208ENST00000470737 LTKP29376 864 aa21.65■■□□□ 1.06
SEMA3F-208ENST00000470737 SENP3Q9H4L4 574 aaPredicted RBP21.64■■□□□ 1.05
SEMA3F-208ENST00000470737 CHIC2Q9UKJ5 165 aa21.62■■□□□ 1.05
SEMA3F-208ENST00000470737 TMEM2Q9UHN6 1383 aa21.61■■□□□ 1.05
SEMA3F-208ENST00000470737 EFCAB6Q5THR3 1501 aa21.6■■□□□ 1.05
SEMA3F-208ENST00000470737 LMTK2Q8IWU2 1503 aa21.6■■□□□ 1.05
SEMA3F-208ENST00000470737 KDM5AP29375 1690 aaKnown RBP21.6■■□□□ 1.05
SEMA3F-208ENST00000470737 XIRP1Q702N8 1843 aaKnown RBP21.56■■□□□ 1.04
SEMA3F-208ENST00000470737 IDI1Q13907 227 aa21.55■■□□□ 1.04
SEMA3F-208ENST00000470737 ADGRB3O60242 1522 aa21.52■■□□□ 1.04
SEMA3F-208ENST00000470737 FAM50AQ14320 339 aaKnown RBP21.52■■□□□ 1.04
SEMA3F-208ENST00000470737 ADGRL2O95490 1459 aa21.52■■□□□ 1.03
SEMA3F-208ENST00000470737 NOS1P29475 1434 aa21.51■■□□□ 1.03
SEMA3F-208ENST00000470737 BCANQ96GW7 911 aa21.5■■□□□ 1.03
SEMA3F-208ENST00000470737 SLC52A1Q9NWF4 448 aa21.5■■□□□ 1.03
SEMA3F-208ENST00000470737 KCNA6P17658 529 aa21.49■■□□□ 1.03
SEMA3F-208ENST00000470737 TMEM94Q12767 1356 aa21.48■■□□□ 1.03
SEMA3F-208ENST00000470737 PROSER2Q86WR7 435 aaPredicted RBP21.48■■□□□ 1.03
SEMA3F-208ENST00000470737 SLC26A8Q96RN1 970 aa21.48■■□□□ 1.03
SEMA3F-208ENST00000470737 TET3O43151 1660 aa21.47■■□□□ 1.03
SEMA3F-208ENST00000470737 FAM135BQ49AJ0 1406 aa21.46■■□□□ 1.03
SEMA3F-208ENST00000470737 ANKRD50Q9ULJ7 1429 aa21.46■■□□□ 1.03
SEMA3F-208ENST00000470737 RPRD2Q5VT52 1461 aaKnown RBP21.46■■□□□ 1.03
SEMA3F-208ENST00000470737 NKTRP30414 1462 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms