RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 PZPP20742 1482 aa12.79□□□□□ -0.36
HDLBP-233ENST00000470710 YEATS2Q9ULM3 1422 aa12.79□□□□□ -0.36
HDLBP-233ENST00000470710 UNC13BO14795 1591 aa12.78□□□□□ -0.36
HDLBP-233ENST00000470710 DIP2CQ9Y2E4 1556 aa12.78□□□□□ -0.36
HDLBP-233ENST00000470710 ABCA6Q8N139 1617 aa12.78□□□□□ -0.36
HDLBP-233ENST00000470710 EIF2AK4Q9P2K8 1649 aaKnown RBP12.78□□□□□ -0.36
HDLBP-233ENST00000470710 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
HDLBP-233ENST00000470710 ATP10AO60312 1499 aa12.77□□□□□ -0.37
HDLBP-233ENST00000470710 KIF3BO15066 747 aa12.76□□□□□ -0.37
HDLBP-233ENST00000470710 REREQ9P2R6 1566 aa12.75□□□□□ -0.37
HDLBP-233ENST00000470710 ARHGEF40Q8TER5 1519 aa12.74□□□□□ -0.37
HDLBP-233ENST00000470710 FAM135AQ9P2D6 1515 aa12.74□□□□□ -0.37
HDLBP-233ENST00000470710 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
HDLBP-233ENST00000470710 DEPDC5O75140 1603 aa12.73□□□□□ -0.37
HDLBP-233ENST00000470710 KANK1Q14678 1352 aa12.73□□□□□ -0.37
HDLBP-233ENST00000470710 IQGAP3Q86VI3 1631 aa12.73□□□□□ -0.37
HDLBP-233ENST00000470710 RNF17Q9BXT8 1623 aaKnown RBP12.73□□□□□ -0.37
HDLBP-233ENST00000470710 VWDEQ8N2E2 1590 aa12.73□□□□□ -0.37
HDLBP-233ENST00000470710 AGLP35573 1532 aa12.72□□□□□ -0.37
HDLBP-233ENST00000470710 PRDM15P57071 1507 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-233ENST00000470710 ANKRD30BQ9BXX2 1392 aa12.72□□□□□ -0.37
HDLBP-233ENST00000470710 PKD2Q13563 968 aa12.72□□□□□ -0.37
HDLBP-233ENST00000470710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.72□□□□□ -0.379e-14■■□□□ 14.5
HDLBP-233ENST00000470710 MROH1Q8NDA8 1641 aa12.71□□□□□ -0.37
HDLBP-233ENST00000470710 LMTK2Q8IWU2 1503 aa12.69□□□□□ -0.38
HDLBP-233ENST00000470710 TIMELESSQ9UNS1 1208 aa12.68□□□□□ -0.38
HDLBP-233ENST00000470710 PPP6R1Q9UPN7 881 aa12.68□□□□□ -0.38
HDLBP-233ENST00000470710 GGT6Q6P531 493 aa12.66□□□□□ -0.38
HDLBP-233ENST00000470710 SIN3AQ96ST3 1273 aa12.66□□□□□ -0.38
HDLBP-233ENST00000470710 ABCC3O15438 1527 aa12.65□□□□□ -0.38
HDLBP-233ENST00000470710 TET3O43151 1660 aa12.64□□□□□ -0.39
HDLBP-233ENST00000470710 WASHC2CQ9Y4E1 1318 aa12.63□□□□□ -0.39
HDLBP-233ENST00000470710 EFCAB6Q5THR3 1501 aa12.63□□□□□ -0.39
HDLBP-233ENST00000470710 NEUROD1Q13562 356 aa12.63□□□□□ -0.39
HDLBP-233ENST00000470710 PLA2R1Q13018 1463 aa12.63□□□□□ -0.39
HDLBP-233ENST00000470710 RPRD2Q5VT52 1461 aaKnown RBP12.63□□□□□ -0.39
HDLBP-233ENST00000470710 PTPRTO14522 1441 aa12.62□□□□□ -0.39
HDLBP-233ENST00000470710 ARHGAP31Q2M1Z3 1444 aa12.62□□□□□ -0.39
HDLBP-233ENST00000470710 ZC3H13Q5T200 1668 aaKnown RBP12.6□□□□□ -0.39
HDLBP-233ENST00000470710 SIGLEC1Q9BZZ2 1709 aa12.59□□□□□ -0.39
HDLBP-233ENST00000470710 TONSLQ96HA7 1378 aa12.59□□□□□ -0.39
HDLBP-233ENST00000470710 E9PCH4 1651 aa12.59□□□□□ -0.39
HDLBP-233ENST00000470710 CCDC144AA2RUR9 1427 aa12.59□□□□□ -0.39
HDLBP-233ENST00000470710 NPATQ14207 1427 aa12.59□□□□□ -0.39
HDLBP-233ENST00000470710 TRPM2O94759 1503 aa12.58□□□□□ -0.4
HDLBP-233ENST00000470710 PLPPR3Q6T4P5 718 aa12.58□□□□□ -0.4
HDLBP-233ENST00000470710 ARID4BQ4LE39 1312 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-233ENST00000470710 CEP152O94986 1710 aa12.57□□□□□ -0.4
HDLBP-233ENST00000470710 NOS1P29475 1434 aa12.56□□□□□ -0.4
HDLBP-233ENST00000470710 CNTLNQ9NXG0 1405 aa12.56□□□□□ -0.4
HDLBP-233ENST00000470710 CAMSAP1Q5T5Y3 1602 aa12.56□□□□□ -0.4
HDLBP-233ENST00000470710 MLECQ14165 292 aa12.55□□□□□ -0.4
HDLBP-233ENST00000470710 PPP1R15AO75807 674 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-233ENST00000470710 L3MBTL2Q969R5 705 aa12.54□□□□□ -0.4
HDLBP-233ENST00000470710 ESF1Q9H501 851 aaKnown RBP12.53□□□□□ -0.4
HDLBP-233ENST00000470710 SPHKAPQ2M3C7 1700 aa12.53□□□□□ -0.4
HDLBP-233ENST00000470710 SPATA31E1Q6ZUB1 1445 aa12.52□□□□□ -0.41
HDLBP-233ENST00000470710 ZMYM3Q14202 1370 aa12.51□□□□□ -0.41
HDLBP-233ENST00000470710 ERVK-7P63135 1459 aa12.51□□□□□ -0.41
HDLBP-233ENST00000470710 NEURL4Q96JN8 1562 aa12.51□□□□□ -0.41
HDLBP-233ENST00000470710 SLC52A1Q9NWF4 448 aa12.5□□□□□ -0.41
HDLBP-233ENST00000470710 CLTCL1P53675 1640 aa12.5□□□□□ -0.41
HDLBP-233ENST00000470710 CLTCQ00610 1675 aaKnown RBP12.49□□□□□ -0.41
HDLBP-233ENST00000470710 SYNMO15061 1565 aa12.48□□□□□ -0.41
HDLBP-233ENST00000470710 SPATA31D1Q6ZQQ2 1576 aa12.48□□□□□ -0.41
HDLBP-233ENST00000470710 FBXO31Q5XUX0 539 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-233ENST00000470710 STAC3Q96MF2 364 aa12.47□□□□□ -0.41
HDLBP-233ENST00000470710 MROH2AA6NES4 1674 aa12.47□□□□□ -0.41
HDLBP-233ENST00000470710 UGGT1Q9NYU2 1555 aa12.47□□□□□ -0.41
HDLBP-233ENST00000470710 UHRF1BP1Q6BDS2 1440 aa12.46□□□□□ -0.41
HDLBP-233ENST00000470710 PREX1Q8TCU6 1659 aa12.46□□□□□ -0.41
HDLBP-233ENST00000470710 PIK3C2BO00750 1634 aa12.46□□□□□ -0.41
HDLBP-233ENST00000470710 IDI1Q13907 227 aa12.45□□□□□ -0.42
HDLBP-233ENST00000470710 RGL3Q3MIN7 710 aa12.45□□□□□ -0.42
HDLBP-233ENST00000470710 ADGRB3O60242 1522 aa12.45□□□□□ -0.42
HDLBP-233ENST00000470710 DCAF11Q8TEB1 546 aa12.44□□□□□ -0.42
HDLBP-233ENST00000470710 TNRQ92752 1358 aa12.43□□□□□ -0.42
HDLBP-233ENST00000470710 RPGRIP1LQ68CZ1 1315 aa12.43□□□□□ -0.42
HDLBP-233ENST00000470710 NBPF8Q3BBV2 869 aa12.43□□□□□ -0.42
HDLBP-233ENST00000470710 ADAMTSL3P82987 1691 aa12.42□□□□□ -0.42
HDLBP-233ENST00000470710 PRAG1Q86YV5 1406 aa12.42□□□□□ -0.42
HDLBP-233ENST00000470710 FER1L4A9Z1Z3 1794 aa12.41□□□□□ -0.42
HDLBP-233ENST00000470710 MYOM2P54296 1465 aa12.4□□□□□ -0.42
HDLBP-233ENST00000470710 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.42
HDLBP-233ENST00000470710 KDM2AQ9Y2K7 1162 aa12.4□□□□□ -0.42
HDLBP-233ENST00000470710 MADDQ8WXG6 1647 aa12.4□□□□□ -0.42
HDLBP-233ENST00000470710 CFAP65Q6ZU64 1925 aaKnown RBP12.39□□□□□ -0.43
HDLBP-233ENST00000470710 RALGAPBQ86X10 1494 aa12.39□□□□□ -0.43
HDLBP-233ENST00000470710 NLRP1Q9C000 1473 aa12.39□□□□□ -0.43
HDLBP-233ENST00000470710 KIF1BO60333 1816 aa12.39□□□□□ -0.43
HDLBP-233ENST00000470710 CEBPAP49715 358 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-233ENST00000470710 ZNF326Q5BKZ1 582 aaKnown RBP12.38□□□□□ -0.43
HDLBP-233ENST00000470710 NRXN1Q9ULB1 1477 aa12.38□□□□□ -0.43
HDLBP-233ENST00000470710 TMEM131LA2VDJ0 1609 aa12.37□□□□□ -0.43
HDLBP-233ENST00000470710 A2ML1A8K2U0 1454 aa12.37□□□□□ -0.43
HDLBP-233ENST00000470710 C3P01024 1663 aa12.37□□□□□ -0.43
HDLBP-233ENST00000470710 ZFYVE9O95405 1425 aa12.37□□□□□ -0.43
HDLBP-233ENST00000470710 GPRASP1Q5JY77 1395 aa12.36□□□□□ -0.43
HDLBP-233ENST00000470710 ZNF316A6NFI3 1004 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-233ENST00000470710 VGFO15240 615 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms