RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 NUP155O75694 1391 aa22.17■■□□□ 1.14
COL4A5-203ENST00000470339 DIP2CQ9Y2E4 1556 aa22.16■■□□□ 1.14
COL4A5-203ENST00000470339 IQGAP3Q86VI3 1631 aa22.15■■□□□ 1.14
COL4A5-203ENST00000470339 COL17A1Q9UMD9 1497 aaPredicted RBP22.15■■□□□ 1.14
COL4A5-203ENST00000470339 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.13
COL4A5-203ENST00000470339 FAM135AQ9P2D6 1515 aa22.11■■□□□ 1.13
COL4A5-203ENST00000470339 RNF17Q9BXT8 1623 aaKnown RBP22.11■■□□□ 1.13
COL4A5-203ENST00000470339 REREQ9P2R6 1566 aa22.11■■□□□ 1.13
COL4A5-203ENST00000470339 ATP10AO60312 1499 aa22.09■■□□□ 1.13
COL4A5-203ENST00000470339 YEATS2Q9ULM3 1422 aa22.09■■□□□ 1.13
COL4A5-203ENST00000470339 PRDM15P57071 1507 aaPredicted RBP22.08■■□□□ 1.13
COL4A5-203ENST00000470339 KIF3BO15066 747 aa22.08■■□□□ 1.13
COL4A5-203ENST00000470339 VWDEQ8N2E2 1590 aa22.08■■□□□ 1.12
COL4A5-203ENST00000470339 KANK1Q14678 1352 aa22.06■■□□□ 1.12
COL4A5-203ENST00000470339 MROH1Q8NDA8 1641 aa22.06■■□□□ 1.12
COL4A5-203ENST00000470339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.05■■□□□ 1.12
COL4A5-203ENST00000470339 TIMELESSQ9UNS1 1208 aa22.05■■□□□ 1.12
COL4A5-203ENST00000470339 ARHGEF40Q8TER5 1519 aa22.05■■□□□ 1.12
COL4A5-203ENST00000470339 ANKRD30BQ9BXX2 1392 aa22.04■■□□□ 1.12
COL4A5-203ENST00000470339 PKD2Q13563 968 aa22.04■■□□□ 1.12
COL4A5-203ENST00000470339 AGLP35573 1532 aa22.03■■□□□ 1.12
COL4A5-203ENST00000470339 TET3O43151 1660 aa22.01■■□□□ 1.11
COL4A5-203ENST00000470339 LMTK2Q8IWU2 1503 aa22■■□□□ 1.11
COL4A5-203ENST00000470339 SIN3AQ96ST3 1273 aa21.99■■□□□ 1.11
COL4A5-203ENST00000470339 FOXD1Q16676 465 aa21.97■■□□□ 1.11
COL4A5-203ENST00000470339 E9PCH4 1651 aa21.95■■□□□ 1.1
COL4A5-203ENST00000470339 ZC3H13Q5T200 1668 aaKnown RBP21.95■■□□□ 1.1
COL4A5-203ENST00000470339 NEUROD1Q13562 356 aa21.94■■□□□ 1.1
COL4A5-203ENST00000470339 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
COL4A5-203ENST00000470339 RPRD2Q5VT52 1461 aaKnown RBP21.94■■□□□ 1.1
COL4A5-203ENST00000470339 CEP152O94986 1710 aa21.94■■□□□ 1.1
COL4A5-203ENST00000470339 GGT6Q6P531 493 aa21.92■■□□□ 1.1
COL4A5-203ENST00000470339 EFCAB6Q5THR3 1501 aa21.91■■□□□ 1.1
COL4A5-203ENST00000470339 ABCC3O15438 1527 aa21.9■■□□□ 1.1
COL4A5-203ENST00000470339 SIGLEC1Q9BZZ2 1709 aa21.89■■□□□ 1.1
COL4A5-203ENST00000470339 TONSLQ96HA7 1378 aa21.88■■□□□ 1.09
COL4A5-203ENST00000470339 WASHC2CQ9Y4E1 1318 aa21.88■■□□□ 1.09
COL4A5-203ENST00000470339 SPHKAPQ2M3C7 1700 aa21.88■■□□□ 1.09
COL4A5-203ENST00000470339 PLA2R1Q13018 1463 aa21.87■■□□□ 1.09
COL4A5-203ENST00000470339 PTPRTO14522 1441 aa21.87■■□□□ 1.09
COL4A5-203ENST00000470339 CAMSAP1Q5T5Y3 1602 aa21.86■■□□□ 1.09
COL4A5-203ENST00000470339 ARHGAP31Q2M1Z3 1444 aa21.84■■□□□ 1.09
COL4A5-203ENST00000470339 TRPM2O94759 1503 aa21.84■■□□□ 1.09
COL4A5-203ENST00000470339 CCDC144AA2RUR9 1427 aa21.83■■□□□ 1.09
COL4A5-203ENST00000470339 PPP1R15AO75807 674 aaPredicted RBP21.81■■□□□ 1.08
COL4A5-203ENST00000470339 NPATQ14207 1427 aa21.79■■□□□ 1.08
COL4A5-203ENST00000470339 CFAP65Q6ZU64 1925 aaKnown RBP21.78■■□□□ 1.08
COL4A5-203ENST00000470339 CLTCQ00610 1675 aaKnown RBP21.76■■□□□ 1.07
COL4A5-203ENST00000470339 NEURL4Q96JN8 1562 aa21.75■■□□□ 1.07
COL4A5-203ENST00000470339 CNTLNQ9NXG0 1405 aa21.75■■□□□ 1.07
COL4A5-203ENST00000470339 L3MBTL2Q969R5 705 aa21.75■■□□□ 1.07
COL4A5-203ENST00000470339 ARID4BQ4LE39 1312 aaPredicted RBP21.74■■□□□ 1.07
COL4A5-203ENST00000470339 CLTCL1P53675 1640 aa21.73■■□□□ 1.07
COL4A5-203ENST00000470339 NOS1P29475 1434 aa21.73■■□□□ 1.07
COL4A5-203ENST00000470339 KIF1BO60333 1816 aa21.72■■□□□ 1.07
COL4A5-203ENST00000470339 MROH2AA6NES4 1674 aa21.71■■□□□ 1.07
COL4A5-203ENST00000470339 PREX1Q8TCU6 1659 aa21.71■■□□□ 1.07
COL4A5-203ENST00000470339 MLECQ14165 292 aa21.7■■□□□ 1.06
COL4A5-203ENST00000470339 ESF1Q9H501 851 aaKnown RBP21.7■■□□□ 1.06
COL4A5-203ENST00000470339 SPATA31E1Q6ZUB1 1445 aa21.69■■□□□ 1.06
COL4A5-203ENST00000470339 PIK3C2BO00750 1634 aa21.68■■□□□ 1.06
COL4A5-203ENST00000470339 SYNMO15061 1565 aa21.65■■□□□ 1.06
COL4A5-203ENST00000470339 STAC3Q96MF2 364 aa21.65■■□□□ 1.06
COL4A5-203ENST00000470339 ZMYM3Q14202 1370 aa21.64■■□□□ 1.06
COL4A5-203ENST00000470339 SLC52A1Q9NWF4 448 aa21.64■■□□□ 1.05
COL4A5-203ENST00000470339 ERVK-7P63135 1459 aa21.64■■□□□ 1.05
COL4A5-203ENST00000470339 FER1L4A9Z1Z3 1794 aa21.64■■□□□ 1.05
COL4A5-203ENST00000470339 UHRF1BP1Q6BDS2 1440 aa21.63■■□□□ 1.05
COL4A5-203ENST00000470339 SPATA31D1Q6ZQQ2 1576 aa21.63■■□□□ 1.05
COL4A5-203ENST00000470339 UGGT1Q9NYU2 1555 aa21.61■■□□□ 1.05
COL4A5-203ENST00000470339 ADGRB3O60242 1522 aa21.6■■□□□ 1.05
COL4A5-203ENST00000470339 RGL3Q3MIN7 710 aa21.59■■□□□ 1.05
COL4A5-203ENST00000470339 DCAF11Q8TEB1 546 aa21.59■■□□□ 1.05
COL4A5-203ENST00000470339 FBXO31Q5XUX0 539 aaPredicted RBP21.57■■□□□ 1.04
COL4A5-203ENST00000470339 IFT172Q9UG01 1749 aa21.57■■□□□ 1.04
COL4A5-203ENST00000470339 NBPF8Q3BBV2 869 aa21.56■■□□□ 1.04
COL4A5-203ENST00000470339 IDI1Q13907 227 aa21.55■■□□□ 1.04
COL4A5-203ENST00000470339 C3P01024 1663 aa21.55■■□□□ 1.04
COL4A5-203ENST00000470339 ADAMTSL3P82987 1691 aa21.55■■□□□ 1.04
COL4A5-203ENST00000470339 RPGRIP1LQ68CZ1 1315 aa21.55■■□□□ 1.04
COL4A5-203ENST00000470339 ZNF316A6NFI3 1004 aaPredicted RBP21.53■■□□□ 1.04
COL4A5-203ENST00000470339 TMEM131LA2VDJ0 1609 aa21.53■■□□□ 1.04
COL4A5-203ENST00000470339 PRAG1Q86YV5 1406 aa21.53■■□□□ 1.04
COL4A5-203ENST00000470339 KDM2AQ9Y2K7 1162 aa21.52■■□□□ 1.04
COL4A5-203ENST00000470339 PPLO60437 1756 aa21.51■■□□□ 1.03
COL4A5-203ENST00000470339 MYOM2P54296 1465 aa21.51■■□□□ 1.03
COL4A5-203ENST00000470339 RALGAPBQ86X10 1494 aa21.51■■□□□ 1.03
COL4A5-203ENST00000470339 KDM5AP29375 1690 aaKnown RBP21.5■■□□□ 1.03
COL4A5-203ENST00000470339 KDM4FA0A1W2PPD8 638 aa21.5■■□□□ 1.03
COL4A5-203ENST00000470339 MYO5BQ9ULV0 1848 aa21.5■■□□□ 1.03
COL4A5-203ENST00000470339 TRPM1Q7Z4N2 1603 aa21.49■■□□□ 1.03
COL4A5-203ENST00000470339 MADDQ8WXG6 1647 aa21.49■■□□□ 1.03
COL4A5-203ENST00000470339 TNRQ92752 1358 aa21.48■■□□□ 1.03
COL4A5-203ENST00000470339 AEBP2Q6ZN18 517 aaPredicted RBP21.48■■□□□ 1.03
COL4A5-203ENST00000470339 KIAA1210Q9ULL0 1709 aa21.47■■□□□ 1.03
COL4A5-203ENST00000470339 CHGAP10645 457 aaKnown RBP21.47■■□□□ 1.03
COL4A5-203ENST00000470339 RIMS1Q86UR5 1692 aaKnown RBP21.47■■□□□ 1.03
COL4A5-203ENST00000470339 ZNF326Q5BKZ1 582 aaKnown RBP21.46■■□□□ 1.03
COL4A5-203ENST00000470339 NLRP1Q9C000 1473 aa21.45■■□□□ 1.02
COL4A5-203ENST00000470339 NRXN1Q9ULB1 1477 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms