RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 ATF3P18847 181 aa8.85□□□□□ -0.99
CD46-212ENST00000469535 NOL8Q76FK4 1167 aaKnown RBP8.85□□□□□ -0.99
CD46-212ENST00000469535 JPH4Q96JJ6 628 aa8.85□□□□□ -0.99
CD46-212ENST00000469535 TCEAL9Q9UHQ7 104 aa8.85□□□□□ -0.99
CD46-212ENST00000469535 NOL10Q9BSC4 688 aaKnown RBP8.85□□□□□ -0.99
CD46-212ENST00000469535 MPHOSPH9Q99550 1183 aa8.84□□□□□ -0.99
CD46-212ENST00000469535 HDAC5Q9UQL6 1122 aa8.84□□□□□ -0.99
CD46-212ENST00000469535 ATAD2BQ9ULI0 1458 aa8.84□□□□□ -1
CD46-212ENST00000469535 COG3Q96JB2 828 aa8.83□□□□□ -1
CD46-212ENST00000469535 PPP4R2Q9NY27 417 aa8.83□□□□□ -1
CD46-212ENST00000469535 L1TD1Q5T7N2 865 aaKnown RBP8.83□□□□□ -1
CD46-212ENST00000469535 CFAP44Q96MT7 982 aa8.83□□□□□ -1
CD46-212ENST00000469535 MINK1Q8N4C8 1332 aaPredicted RBP8.83□□□□□ -1
CD46-212ENST00000469535 SF3B2Q13435 895 aaKnown RBP8.83□□□□□ -1
CD46-212ENST00000469535 EIF2S2P20042 333 aaKnown RBP8.82□□□□□ -1
CD46-212ENST00000469535 TEFQ10587 303 aa8.82□□□□□ -1
CD46-212ENST00000469535 VPS37DQ86XT2 251 aa8.82□□□□□ -1
CD46-212ENST00000469535 HMMRO75330 724 aa8.82□□□□□ -1
CD46-212ENST00000469535 NAP1L5Q96NT1 182 aaPredicted RBP8.82□□□□□ -1
CD46-212ENST00000469535 LMOD3Q0VAK6 560 aa8.82□□□□□ -1
CD46-212ENST00000469535 CLUAP1Q96AJ1 413 aa8.82□□□□□ -1
CD46-212ENST00000469535 SETD5Q9C0A6 1442 aa8.82□□□□□ -1
CD46-212ENST00000469535 AMOTL1Q8IY63 956 aa8.82□□□□□ -1
CD46-212ENST00000469535 NECTIN2Q92692 538 aa8.82□□□□□ -1
CD46-212ENST00000469535 ELL2O00472 640 aaPredicted RBP8.81□□□□□ -1
CD46-212ENST00000469535 NCAPD3P42695 1498 aa8.81□□□□□ -1
CD46-212ENST00000469535 RRP7AQ9Y3A4 280 aaKnown RBP8.81□□□□□ -1
CD46-212ENST00000469535 HTATSF1O43719 755 aaKnown RBP8.8□□□□□ -1
CD46-212ENST00000469535 USP35Q9P2H5 1018 aa8.8□□□□□ -1
CD46-212ENST00000469535 NUTM2BA6NNL0 878 aaPredicted RBP8.8□□□□□ -1
CD46-212ENST00000469535 NUTM2EB1AL46 878 aaPredicted RBP8.8□□□□□ -1
CD46-212ENST00000469535 NUTM2AQ8IVF1 878 aaPredicted RBP8.8□□□□□ -1
CD46-212ENST00000469535 RWDD1Q9H446 243 aaPredicted RBP8.8□□□□□ -1
CD46-212ENST00000469535 CADPSQ9ULU8 1353 aa8.8□□□□□ -1
CD46-212ENST00000469535 FMN1Q68DA7 1419 aa8.8□□□□□ -1
CD46-212ENST00000469535 MROH2BQ7Z745 1585 aa8.8□□□□□ -1
CD46-212ENST00000469535 DHX16O60231 1041 aaKnown RBP8.8□□□□□ -1
CD46-212ENST00000469535 RBM33Q96EV2 1170 aaKnown RBP8.8□□□□□ -1
CD46-212ENST00000469535 KANK4Q5T7N3 995 aaPredicted RBP8.8□□□□□ -1
CD46-212ENST00000469535 NUTM2GQ5VZR2 741 aa8.79□□□□□ -1
CD46-212ENST00000469535 CEP89Q96ST8 783 aa8.79□□□□□ -1
CD46-212ENST00000469535 ABCC8Q09428 1581 aa8.79□□□□□ -1
CD46-212ENST00000469535 PIP4K2BP78356 416 aa8.79□□□□□ -1
CD46-212ENST00000469535 MFAP1P55081 439 aaKnown RBP8.79□□□□□ -1
CD46-212ENST00000469535 FBXO3Q9UK99 471 aa8.78□□□□□ -1
CD46-212ENST00000469535 PES1O00541 588 aaKnown RBP8.78□□□□□ -1
CD46-212ENST00000469535 CCDC34Q96HJ3 373 aa8.78□□□□□ -1
CD46-212ENST00000469535 TOP2AP11388 1531 aaKnown RBP8.78□□□□□ -1
CD46-212ENST00000469535 FHOD3Q2V2M9 1422 aa8.78□□□□□ -1
CD46-212ENST00000469535 TPM4P67936 248 aa8.78□□□□□ -1
CD46-212ENST00000469535 AKAP17AQ02040 695 aaKnown RBP8.78□□□□□ -1
CD46-212ENST00000469535 A0A0U1RQG5 324 aaPredicted RBP8.77□□□□□ -1
CD46-212ENST00000469535 VGFO15240 615 aaPredicted RBP8.77□□□□□ -1
CD46-212ENST00000469535 NEXNQ0ZGT2 675 aa8.77□□□□□ -1
CD46-212ENST00000469535 FOXD4L1Q9NU39 408 aa8.77□□□□□ -1.01
CD46-212ENST00000469535 PTPRGP23470 1445 aa8.77□□□□□ -1.01
CD46-212ENST00000469535 RILPL2Q969X0 211 aa8.77□□□□□ -1.01
CD46-212ENST00000469535 CCDC18Q5T9S5 1454 aa8.77□□□□□ -1.01
CD46-212ENST00000469535 APPP05067 770 aa8.76□□□□□ -1.01
CD46-212ENST00000469535 RALBP1Q15311 655 aa8.76□□□□□ -1.01
CD46-212ENST00000469535 RTN4Q9NQC3 1192 aaKnown RBP8.76□□□□□ -1.01
CD46-212ENST00000469535 CCDC88BA6NC98 1476 aa8.76□□□□□ -1.01
CD46-212ENST00000469535 RSPH4AQ5TD94 716 aa8.76□□□□□ -1.01
CD46-212ENST00000469535 FAM177BA6PVY3 158 aa8.76□□□□□ -1.01
CD46-212ENST00000469535 MSNP26038 577 aaKnown RBP8.76□□□□□ -1.01
CD46-212ENST00000469535 C9orf78Q9NZ63 289 aaPredicted RBP8.76□□□□□ -1.01
CD46-212ENST00000469535 NLRP2Q9NX02 1062 aa8.76□□□□□ -1.01
CD46-212ENST00000469535 RCAN3Q9UKA8 241 aa8.75□□□□□ -1.01
CD46-212ENST00000469535 EVC2Q86UK5 1308 aa8.75□□□□□ -1.01
CD46-212ENST00000469535 FOXD4L5Q5VV16 416 aaPredicted RBP8.75□□□□□ -1.01
CD46-212ENST00000469535 FOXD4L4Q8WXT5 416 aaPredicted RBP8.75□□□□□ -1.01
CD46-212ENST00000469535 SF3A1Q15459 793 aaKnown RBP8.75□□□□□ -1.01
CD46-212ENST00000469535 FYB1O15117 783 aa8.75□□□□□ -1.01
CD46-212ENST00000469535 STRN4Q9NRL3 753 aa8.75□□□□□ -1.01
CD46-212ENST00000469535 RAPGEF4Q8WZA2 1011 aa8.75□□□□□ -1.01
CD46-212ENST00000469535 SYNE3Q6ZMZ3 975 aa8.74□□□□□ -1.01
CD46-212ENST00000469535 PMFBP1Q8TBY8 1022 aa8.74□□□□□ -1.01
CD46-212ENST00000469535 SMARCA4P51532 1647 aa8.74□□□□□ -1.01
CD46-212ENST00000469535 NOP58Q9Y2X3 529 aaKnown RBP8.74□□□□□ -1.01
CD46-212ENST00000469535 KIF16BQ96L93 1317 aa8.74□□□□□ -1.01
CD46-212ENST00000469535 TPD52L1Q16890 204 aaPredicted RBP8.74□□□□□ -1.01
CD46-212ENST00000469535 CENPJQ9HC77 1338 aaPredicted RBP8.73□□□□□ -1.01
CD46-212ENST00000469535 H3BQV1 296 aa8.73□□□□□ -1.01
CD46-212ENST00000469535 IFFO2Q5TF58 517 aa8.73□□□□□ -1.01
CD46-212ENST00000469535 CCDC144AA2RUR9 1427 aa8.73□□□□□ -1.01
CD46-212ENST00000469535 CCAR1Q8IX12 1150 aaKnown RBP8.73□□□□□ -1.01
CD46-212ENST00000469535 GZF1Q9H116 711 aaPredicted RBP8.73□□□□□ -1.01
CD46-212ENST00000469535 SLKQ9H2G2 1235 aaPredicted RBP8.73□□□□□ -1.01
CD46-212ENST00000469535 UACAQ9BZF9 1416 aa8.73□□□□□ -1.01
CD46-212ENST00000469535 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.73□□□□□ -1.01
CD46-212ENST00000469535 CCDC43Q96MW1 224 aaKnown RBP8.73□□□□□ -1.01
CD46-212ENST00000469535 BCL2L13Q9BXK5 485 aa8.73□□□□□ -1.01
CD46-212ENST00000469535 PLIN1O60240 522 aa8.72□□□□□ -1.01
CD46-212ENST00000469535 CCDC27Q2M243 656 aa8.72□□□□□ -1.01
CD46-212ENST00000469535 MTMR7Q9Y216 660 aa8.72□□□□□ -1.01
CD46-212ENST00000469535 AIMP1Q12904 312 aaKnown RBP8.72□□□□□ -1.01
CD46-212ENST00000469535 PROSER2Q86WR7 435 aaPredicted RBP8.72□□□□□ -1.01
CD46-212ENST00000469535 GBP4Q96PP9 640 aa8.72□□□□□ -1.01
CD46-212ENST00000469535 CGNL1Q0VF96 1302 aa8.72□□□□□ -1.01
CD46-212ENST00000469535 FAM184AQ8NB25 1140 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms