RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 MYO3AQ8NEV4 1616 aa20.05■□□□□ 0.8
GAPVD1-214ENST00000469528 TCOF1Q13428 1488 aaKnown RBP20.05■□□□□ 0.8
GAPVD1-214ENST00000469528 ANKLE2Q86XL3 938 aa20.05■□□□□ 0.8
GAPVD1-214ENST00000469528 ZNF142P52746 1687 aaPredicted RBP20.05■□□□□ 0.8
GAPVD1-214ENST00000469528 TNRQ92752 1358 aa20.05■□□□□ 0.8
GAPVD1-214ENST00000469528 FBXO31Q5XUX0 539 aaPredicted RBP20.04■□□□□ 0.8
GAPVD1-214ENST00000469528 FAM135AQ9P2D6 1515 aa20.03■□□□□ 0.8
GAPVD1-214ENST00000469528 CAMSAP2Q08AD1 1489 aa20.03■□□□□ 0.8
GAPVD1-214ENST00000469528 SOCS7O14512 581 aa20■□□□□ 0.79
GAPVD1-214ENST00000469528 TOM1O60784 492 aa20■□□□□ 0.79
GAPVD1-214ENST00000469528 ILDR2Q71H61 639 aa20■□□□□ 0.79
GAPVD1-214ENST00000469528 PZPP20742 1482 aa19.99■□□□□ 0.79
GAPVD1-214ENST00000469528 KDM5DQ9BY66 1539 aa19.99■□□□□ 0.79
GAPVD1-214ENST00000469528 MIA2Q96PC5 1412 aa19.99■□□□□ 0.79
GAPVD1-214ENST00000469528 DNMT1P26358 1616 aaKnown RBP19.98■□□□□ 0.79
GAPVD1-214ENST00000469528 ARHGEF5Q12774 1597 aa19.97■□□□□ 0.79
GAPVD1-214ENST00000469528 VPS8Q8N3P4 1428 aa19.96■□□□□ 0.79
GAPVD1-214ENST00000469528 NLRP1Q9C000 1473 aa19.96■□□□□ 0.79
GAPVD1-214ENST00000469528 LRRC9Q6ZRR7 1453 aa19.95■□□□□ 0.78
GAPVD1-214ENST00000469528 LOC105371045A0A1W2PR82 267 aa19.95■□□□□ 0.78
GAPVD1-214ENST00000469528 APLP2Q06481 763 aa19.95■□□□□ 0.78
GAPVD1-214ENST00000469528 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.93■□□□□ 0.78
GAPVD1-214ENST00000469528 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
GAPVD1-214ENST00000469528 CPS1P31327 1500 aa19.91■□□□□ 0.78
GAPVD1-214ENST00000469528 MAP3K1Q13233 1512 aa19.91■□□□□ 0.78
GAPVD1-214ENST00000469528 KANK4Q5T7N3 995 aaPredicted RBP19.9■□□□□ 0.78
GAPVD1-214ENST00000469528 SHANK2Q9UPX8 1470 aa19.9■□□□□ 0.78
GAPVD1-214ENST00000469528 UGGT1Q9NYU2 1555 aa19.9■□□□□ 0.78
GAPVD1-214ENST00000469528 MYOM3Q5VTT5 1437 aa19.89■□□□□ 0.77
GAPVD1-214ENST00000469528 SPATA31D1Q6ZQQ2 1576 aa19.89■□□□□ 0.77
GAPVD1-214ENST00000469528 PIP4K2BP78356 416 aa19.88■□□□□ 0.77
GAPVD1-214ENST00000469528 NPHP4O75161 1426 aaPredicted RBP19.86■□□□□ 0.77
GAPVD1-214ENST00000469528 MAST1Q9Y2H9 1570 aa19.86■□□□□ 0.77
GAPVD1-214ENST00000469528 MED14O60244 1454 aa19.86■□□□□ 0.77
GAPVD1-214ENST00000469528 POLR1AO95602 1720 aaPredicted RBP19.85■□□□□ 0.77
GAPVD1-214ENST00000469528 HSPA1LP34931 641 aa19.82■□□□□ 0.76
GAPVD1-214ENST00000469528 DEPDC5O75140 1603 aa19.82■□□□□ 0.76
GAPVD1-214ENST00000469528 ZC3H13Q5T200 1668 aaKnown RBP19.81■□□□□ 0.76
GAPVD1-214ENST00000469528 RNF17Q9BXT8 1623 aaKnown RBP19.81■□□□□ 0.76
GAPVD1-214ENST00000469528 EIF2AK4Q9P2K8 1649 aaKnown RBP19.81■□□□□ 0.76
GAPVD1-214ENST00000469528 RRP7BPQ9NSQ0 103 aa19.81■□□□□ 0.76
GAPVD1-214ENST00000469528 EID1Q9Y6B2 187 aa19.81■□□□□ 0.76
GAPVD1-214ENST00000469528 NEURL4Q96JN8 1562 aa19.81■□□□□ 0.76
GAPVD1-214ENST00000469528 ABCC3O15438 1527 aa19.81■□□□□ 0.76
GAPVD1-214ENST00000469528 DUOX2Q9NRD8 1548 aa19.81■□□□□ 0.76
GAPVD1-214ENST00000469528 KANK1Q14678 1352 aa19.79■□□□□ 0.76
GAPVD1-214ENST00000469528 TXNDC2Q86VQ3 553 aa19.78■□□□□ 0.76
GAPVD1-214ENST00000469528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.78■□□□□ 0.76
GAPVD1-214ENST00000469528 STAG3Q9UJ98 1225 aa19.78■□□□□ 0.76
GAPVD1-214ENST00000469528 ERVK-7P63135 1459 aa19.78■□□□□ 0.76
GAPVD1-214ENST00000469528 KIF15Q9NS87 1388 aa19.77■□□□□ 0.76
GAPVD1-214ENST00000469528 ARHGAP31Q2M1Z3 1444 aa19.76■□□□□ 0.75
GAPVD1-214ENST00000469528 ERBINQ96RT1 1412 aa19.75■□□□□ 0.75
GAPVD1-214ENST00000469528 VWDEQ8N2E2 1590 aa19.74■□□□□ 0.75
GAPVD1-214ENST00000469528 IQGAP1P46940 1657 aa19.74■□□□□ 0.75
GAPVD1-214ENST00000469528 ABCC5O15440 1437 aa19.73■□□□□ 0.75
GAPVD1-214ENST00000469528 ANKRD30AQ9BXX3 1397 aa19.72■□□□□ 0.75
GAPVD1-214ENST00000469528 CFAP65Q6ZU64 1925 aaKnown RBP19.71■□□□□ 0.75
GAPVD1-214ENST00000469528 LTKP29376 864 aa19.71■□□□□ 0.75
GAPVD1-214ENST00000469528 SCAF11Q99590 1463 aaKnown RBP19.7■□□□□ 0.74
GAPVD1-214ENST00000469528 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
GAPVD1-214ENST00000469528 CHIC2Q9UKJ5 165 aa19.69■□□□□ 0.74
GAPVD1-214ENST00000469528 DAPK1P53355 1430 aa19.68■□□□□ 0.74
GAPVD1-214ENST00000469528 MROH1Q8NDA8 1641 aa19.68■□□□□ 0.74
GAPVD1-214ENST00000469528 LRRC7Q96NW7 1537 aa19.67■□□□□ 0.74
GAPVD1-214ENST00000469528 PTPN23Q9H3S7 1636 aa19.67■□□□□ 0.74
GAPVD1-214ENST00000469528 CEP152O94986 1710 aa19.66■□□□□ 0.74
GAPVD1-214ENST00000469528 FGD6Q6ZV73 1430 aa19.66■□□□□ 0.74
GAPVD1-214ENST00000469528 SLIT1O75093 1534 aa19.66■□□□□ 0.74
GAPVD1-214ENST00000469528 PRDM15P57071 1507 aaPredicted RBP19.66■□□□□ 0.74
GAPVD1-214ENST00000469528 UBR1Q8IWV7 1749 aa19.65■□□□□ 0.74
GAPVD1-214ENST00000469528 HDGFP51858 240 aaKnown RBP19.65■□□□□ 0.74
GAPVD1-214ENST00000469528 IDI1Q13907 227 aa19.65■□□□□ 0.74
GAPVD1-214ENST00000469528 SLC52A1Q9NWF4 448 aa19.65■□□□□ 0.74
GAPVD1-214ENST00000469528 TMEM2Q9UHN6 1383 aa19.65■□□□□ 0.74
GAPVD1-214ENST00000469528 ARHGAP23Q9P227 1491 aa19.65■□□□□ 0.74
GAPVD1-214ENST00000469528 SYNMO15061 1565 aa19.61■□□□□ 0.73
GAPVD1-214ENST00000469528 KCNA6P17658 529 aa19.61■□□□□ 0.73
GAPVD1-214ENST00000469528 MED1Q15648 1581 aaPredicted RBP19.61■□□□□ 0.73
GAPVD1-214ENST00000469528 CROCC2H7BZ55 1655 aa19.6■□□□□ 0.73
GAPVD1-214ENST00000469528 FAM50AQ14320 339 aaKnown RBP19.6■□□□□ 0.73
GAPVD1-214ENST00000469528 BCANQ96GW7 911 aa19.6■□□□□ 0.73
GAPVD1-214ENST00000469528 SENP3Q9H4L4 574 aaPredicted RBP19.59■□□□□ 0.73
GAPVD1-214ENST00000469528 LMTK2Q8IWU2 1503 aa19.59■□□□□ 0.73
GAPVD1-214ENST00000469528 PROSER2Q86WR7 435 aaPredicted RBP19.58■□□□□ 0.72
GAPVD1-214ENST00000469528 STRCP1A6NGW2 1772 aa19.57■□□□□ 0.72
GAPVD1-214ENST00000469528 EFCAB6Q5THR3 1501 aa19.56■□□□□ 0.72
GAPVD1-214ENST00000469528 KDM5AP29375 1690 aaKnown RBP19.56■□□□□ 0.72
GAPVD1-214ENST00000469528 ALKQ9UM73 1620 aa19.55■□□□□ 0.72
GAPVD1-214ENST00000469528 SLC26A8Q96RN1 970 aa19.55■□□□□ 0.72
GAPVD1-214ENST00000469528 PIK3C2BO00750 1634 aa19.54■□□□□ 0.72
GAPVD1-214ENST00000469528 FAM135BQ49AJ0 1406 aa19.53■□□□□ 0.72
GAPVD1-214ENST00000469528 NOS1P29475 1434 aa19.52■□□□□ 0.72
GAPVD1-214ENST00000469528 ANKRD50Q9ULJ7 1429 aa19.52■□□□□ 0.72
GAPVD1-214ENST00000469528 PPP1R15AO75807 674 aaPredicted RBP19.51■□□□□ 0.71
GAPVD1-214ENST00000469528 TMEM94Q12767 1356 aa19.51■□□□□ 0.71
GAPVD1-214ENST00000469528 ADGRL2O95490 1459 aa19.51■□□□□ 0.71
GAPVD1-214ENST00000469528 RPRD2Q5VT52 1461 aaKnown RBP19.51■□□□□ 0.71
GAPVD1-214ENST00000469528 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.5■□□□□ 0.71
GAPVD1-214ENST00000469528 TET3O43151 1660 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms