RNA–Protein interactions for RNA: ENST00000469507.1

FAM49A-205, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 2

Gene FAM49A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-205ENST00000469507 TK2O00142 265 aa9.03□□□□□ -0.96
FAM49A-205ENST00000469507 RANGAP1P46060 587 aaPredicted RBP9.02□□□□□ -0.97
FAM49A-205ENST00000469507 IL27Q8NEV9 243 aa9.02□□□□□ -0.97
FAM49A-205ENST00000469507 LARP6Q9BRS8 491 aaKnown RBP9.02□□□□□ -0.97
FAM49A-205ENST00000469507 MFSD10Q14728 455 aa9.01□□□□□ -0.97
FAM49A-205ENST00000469507 PLPP6Q8IY26 295 aa9.01□□□□□ -0.97
FAM49A-205ENST00000469507 KRI1Q8N9T8 703 aaKnown RBP9.01□□□□□ -0.97
FAM49A-205ENST00000469507 GPBP1L1Q9HC44 474 aaPredicted RBP9.01□□□□□ -0.97
FAM49A-205ENST00000469507 NCKAP5LQ9HCH0 1330 aa9.01□□□□□ -0.97
FAM49A-205ENST00000469507 FOXK1P85037 733 aa9□□□□□ -0.97
FAM49A-205ENST00000469507 KCTD12Q96CX2 325 aaKnown RBP8.99□□□□□ -0.97
FAM49A-205ENST00000469507 TRIM26Q12899 539 aaPredicted RBP8.98□□□□□ -0.97
FAM49A-205ENST00000469507 PPP4R3BQ5MIZ7 849 aa8.98□□□□□ -0.97
FAM49A-205ENST00000469507 KDM4CQ9H3R0 1056 aa8.98□□□□□ -0.97
FAM49A-205ENST00000469507 DSG2Q14126 1118 aa8.97□□□□□ -0.97
FAM49A-205ENST00000469507 GPHNQ9NQX3 736 aaPredicted RBP8.97□□□□□ -0.97
FAM49A-205ENST00000469507 CAMK2BQ13554 666 aa8.96□□□□□ -0.98
FAM49A-205ENST00000469507 GPIHBP1Q8IV16 184 aa8.96□□□□□ -0.98
FAM49A-205ENST00000469507 TRIM66O15016 1216 aa8.95□□□□□ -0.98
FAM49A-205ENST00000469507 DDX27Q96GQ7 796 aaKnown RBP8.95□□□□□ -0.98
FAM49A-205ENST00000469507 KCNK17Q96T54 332 aa8.95□□□□□ -0.98
FAM49A-205ENST00000469507 CRISPLD2Q9H0B8 497 aa8.95□□□□□ -0.98
FAM49A-205ENST00000469507 PDE4DQ08499 809 aa8.94□□□□□ -0.98
FAM49A-205ENST00000469507 RBM26Q5T8P6 1007 aaKnown RBP8.94□□□□□ -0.98
FAM49A-205ENST00000469507 HRCP23327 699 aa8.93□□□□□ -0.98
FAM49A-205ENST00000469507 TBC1D12O60347 775 aa8.92□□□□□ -0.98
FAM49A-205ENST00000469507 STAC3Q96MF2 364 aa8.92□□□□□ -0.98
FAM49A-205ENST00000469507 VPS9D1Q9Y2B5 631 aa8.91□□□□□ -0.98
FAM49A-205ENST00000469507 MLLT3P42568 568 aaPredicted RBP8.9□□□□□ -0.98
FAM49A-205ENST00000469507 PTPN5P54829 565 aa8.89□□□□□ -0.99
FAM49A-205ENST00000469507 OXER1Q8TDS5 423 aa8.89□□□□□ -0.99
FAM49A-205ENST00000469507 UPF1Q92900 1129 aaKnown RBP eCLIP8.89□□□□□ -0.99
FAM49A-205ENST00000469507 KCNH8Q96L42 1107 aa8.88□□□□□ -0.99
FAM49A-205ENST00000469507 ZNF454Q8N9F8 522 aa8.87□□□□□ -0.99
FAM49A-205ENST00000469507 ARID3AQ99856 593 aa8.86□□□□□ -0.99
FAM49A-205ENST00000469507 C1orf115Q9H7X2 142 aa8.86□□□□□ -0.99
FAM49A-205ENST00000469507 BCL2L12Q9HB09 334 aa8.85□□□□□ -0.99
FAM49A-205ENST00000469507 FLIIQ13045 1269 aa8.84□□□□□ -0.99
FAM49A-205ENST00000469507 NPM2Q86SE8 214 aaKnown RBP8.84□□□□□ -0.99
FAM49A-205ENST00000469507 SLC4A5Q9BY07 1137 aa8.84□□□□□ -0.99
FAM49A-205ENST00000469507 FAM117AQ9C073 453 aa8.84□□□□□ -0.99
FAM49A-205ENST00000469507 BHMG1C9JSJ3 638 aaPredicted RBP8.83□□□□□ -1
FAM49A-205ENST00000469507 THSD4Q6ZMP0 1018 aa8.83□□□□□ -1
FAM49A-205ENST00000469507 SPDYE16A6NNV3 312 aaPredicted RBP8.82□□□□□ -1
FAM49A-205ENST00000469507 FOSBP53539 338 aa8.82□□□□□ -1
FAM49A-205ENST00000469507 DDRGK1Q96HY6 314 aa8.82□□□□□ -1
FAM49A-205ENST00000469507 APBB1O00213 710 aa8.81□□□□□ -1
FAM49A-205ENST00000469507 MINK1Q8N4C8 1332 aaPredicted RBP8.8□□□□□ -1
FAM49A-205ENST00000469507 PPP1R15BQ5SWA1 713 aa8.8□□□□□ -1
FAM49A-205ENST00000469507 IFFO2Q5TF58 517 aa8.8□□□□□ -1
FAM49A-205ENST00000469507 ZBED2Q9BTP6 218 aa8.8□□□□□ -1
FAM49A-205ENST00000469507 PTPREP23469 700 aa8.79□□□□□ -1
FAM49A-205ENST00000469507 PLEKHG3A1L390 1219 aa8.78□□□□□ -1
FAM49A-205ENST00000469507 WNT2BQ93097 391 aa8.78□□□□□ -1
FAM49A-205ENST00000469507 A0A0G2JS52 829 aa8.77□□□□□ -1.01
FAM49A-205ENST00000469507 ARID3CA6NKF2 412 aa8.77□□□□□ -1.01
FAM49A-205ENST00000469507 GOLGA8CPA6NN73 597 aa8.77□□□□□ -1.01
FAM49A-205ENST00000469507 RGS20O76081 388 aa8.77□□□□□ -1.01
FAM49A-205ENST00000469507 PDIA4P13667 645 aaKnown RBP8.77□□□□□ -1.01
FAM49A-205ENST00000469507 ADAM33Q9BZ11 813 aa8.77□□□□□ -1.01
FAM49A-205ENST00000469507 ANO8Q9HCE9 1232 aaPredicted RBP8.77□□□□□ -1.01
FAM49A-205ENST00000469507 GPR37O15354 613 aa8.76□□□□□ -1.01
FAM49A-205ENST00000469507 PDIA6Q15084 440 aa8.76□□□□□ -1.01
FAM49A-205ENST00000469507 MRPL50Q8N5N7 158 aaKnown RBP8.76□□□□□ -1.01
FAM49A-205ENST00000469507 JPH4Q96JJ6 628 aa8.76□□□□□ -1.01
FAM49A-205ENST00000469507 GOPCQ9HD26 462 aa8.76□□□□□ -1.01
FAM49A-205ENST00000469507 DPYSL4O14531 572 aa8.75□□□□□ -1.01
FAM49A-205ENST00000469507 IRX2Q9BZI1 471 aaPredicted RBP8.75□□□□□ -1.01
FAM49A-205ENST00000469507 ZBTB7CA1YPR0 619 aa8.74□□□□□ -1.01
FAM49A-205ENST00000469507 A6NJR5 290 aa8.74□□□□□ -1.01
FAM49A-205ENST00000469507 IRF6O14896 467 aa8.74□□□□□ -1.01
FAM49A-205ENST00000469507 EVI5O60447 810 aa8.74□□□□□ -1.01
FAM49A-205ENST00000469507 AMHR2Q16671 573 aa8.74□□□□□ -1.01
FAM49A-205ENST00000469507 ZDHHC16Q969W1 377 aa8.74□□□□□ -1.01
FAM49A-205ENST00000469507 MAP2K5Q13163 448 aa8.73□□□□□ -1.01
FAM49A-205ENST00000469507 EMILIN3Q9NT22 766 aa8.73□□□□□ -1.01
FAM49A-205ENST00000469507 ONECUT3O60422 494 aaPredicted RBP8.71□□□□□ -1.02
FAM49A-205ENST00000469507 CCDC102AQ96A19 550 aa8.71□□□□□ -1.02
FAM49A-205ENST00000469507 NBPF3Q9H094 633 aa8.71□□□□□ -1.02
FAM49A-205ENST00000469507 TRAK2O60296 914 aa8.7□□□□□ -1.02
FAM49A-205ENST00000469507 PARP9Q8IXQ6 854 aa8.7□□□□□ -1.02
FAM49A-205ENST00000469507 CCDC9Q9Y3X0 531 aaKnown RBP8.69□□□□□ -1.02
FAM49A-205ENST00000469507 PROX2Q3B8N5 592 aa8.68□□□□□ -1.02
FAM49A-205ENST00000469507 NUTM2FA1L443 756 aa8.67□□□□□ -1.02
FAM49A-205ENST00000469507 GNPATO15228 680 aa8.67□□□□□ -1.02
FAM49A-205ENST00000469507 PPP1R3GB7ZBB8 358 aa8.66□□□□□ -1.02
FAM49A-205ENST00000469507 COL9A1P20849 921 aa8.66□□□□□ -1.02
FAM49A-205ENST00000469507 MAP3K9P80192 1104 aa8.66□□□□□ -1.02
FAM49A-205ENST00000469507 CCDC82Q8N4S0 544 aa8.66□□□□□ -1.02
FAM49A-205ENST00000469507 PCMTD1Q96MG8 357 aaPredicted RBP8.66□□□□□ -1.02
FAM49A-205ENST00000469507 PCDHGA10Q9Y5H3 936 aa8.66□□□□□ -1.02
FAM49A-205ENST00000469507 ANKK1Q8NFD2 765 aa8.65□□□□□ -1.02
FAM49A-205ENST00000469507 CLUAP1Q96AJ1 413 aa8.65□□□□□ -1.02
FAM49A-205ENST00000469507 RABGEF1Q9UJ41 708 aa8.65□□□□□ -1.02
FAM49A-205ENST00000469507 GRXCR2A6NFK2 248 aa8.64□□□□□ -1.03
FAM49A-205ENST00000469507 ITGBL1O95965 494 aaPredicted RBP8.64□□□□□ -1.03
FAM49A-205ENST00000469507 BCAMP50895 628 aa8.64□□□□□ -1.03
FAM49A-205ENST00000469507 HIC1Q14526 733 aa8.64□□□□□ -1.03
FAM49A-205ENST00000469507 NECTIN2Q92692 538 aa8.63□□□□□ -1.03
FAM49A-205ENST00000469507 FCHSD2O94868 740 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms