RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 PLA2R1Q13018 1463 aa17.3■□□□□ 0.36
COL4A3-204ENST00000469504 ZNF142P52746 1687 aaPredicted RBP17.29■□□□□ 0.36
COL4A3-204ENST00000469504 KDM5DQ9BY66 1539 aa17.28■□□□□ 0.36
COL4A3-204ENST00000469504 KIF3BO15066 747 aa17.28■□□□□ 0.36
COL4A3-204ENST00000469504 MYOM3Q5VTT5 1437 aa17.28■□□□□ 0.36
COL4A3-204ENST00000469504 CAMSAP1Q5T5Y3 1602 aa17.28■□□□□ 0.36
COL4A3-204ENST00000469504 APLP2Q06481 763 aa17.27■□□□□ 0.36
COL4A3-204ENST00000469504 PKD2Q13563 968 aa17.27■□□□□ 0.36
COL4A3-204ENST00000469504 MYO3AQ8NEV4 1616 aa17.27■□□□□ 0.36
COL4A3-204ENST00000469504 MAST1Q9Y2H9 1570 aa17.27■□□□□ 0.35
COL4A3-204ENST00000469504 CEP170BQ9Y4F5 1589 aaPredicted RBP17.26■□□□□ 0.35
COL4A3-204ENST00000469504 KANK4Q5T7N3 995 aaPredicted RBP17.25■□□□□ 0.35
COL4A3-204ENST00000469504 PZPP20742 1482 aa17.24■□□□□ 0.35
COL4A3-204ENST00000469504 IQSEC2Q5JU85 1478 aa17.24■□□□□ 0.35
COL4A3-204ENST00000469504 WASHC2CQ9Y4E1 1318 aa17.24■□□□□ 0.35
COL4A3-204ENST00000469504 POTEDQ86YR6 584 aa17.24■□□□□ 0.35
COL4A3-204ENST00000469504 A2ML1A8K2U0 1454 aa17.24■□□□□ 0.35
COL4A3-204ENST00000469504 TCOF1Q13428 1488 aaKnown RBP17.23■□□□□ 0.35
COL4A3-204ENST00000469504 EIF2AK4Q9P2K8 1649 aaKnown RBP17.21■□□□□ 0.35
COL4A3-204ENST00000469504 TNRQ92752 1358 aa17.2■□□□□ 0.34
COL4A3-204ENST00000469504 SHANK2Q9UPX8 1470 aa17.19■□□□□ 0.34
COL4A3-204ENST00000469504 LTBP4Q8N2S1 1624 aa17.19■□□□□ 0.34
COL4A3-204ENST00000469504 RNF17Q9BXT8 1623 aaKnown RBP17.19■□□□□ 0.34
COL4A3-204ENST00000469504 NLRP1Q9C000 1473 aa17.18■□□□□ 0.34
COL4A3-204ENST00000469504 DUOX2Q9NRD8 1548 aa17.17■□□□□ 0.34
COL4A3-204ENST00000469504 ZC3H13Q5T200 1668 aaKnown RBP17.17■□□□□ 0.34
COL4A3-204ENST00000469504 DNMT1P26358 1616 aaKnown RBP17.17■□□□□ 0.34
COL4A3-204ENST00000469504 NCKAP5LQ9HCH0 1330 aa17.17■□□□□ 0.34
COL4A3-204ENST00000469504 ERBINQ96RT1 1412 aa17.14■□□□□ 0.33
COL4A3-204ENST00000469504 FBXO31Q5XUX0 539 aaPredicted RBP17.14■□□□□ 0.33
COL4A3-204ENST00000469504 THEMISQ8N1K5 641 aaPredicted RBP17.14■□□□□ 0.33
COL4A3-204ENST00000469504 ABCC3O15438 1527 aa17.14■□□□□ 0.33
COL4A3-204ENST00000469504 PTPN23Q9H3S7 1636 aa17.13■□□□□ 0.33
COL4A3-204ENST00000469504 FGD6Q6ZV73 1430 aa17.13■□□□□ 0.33
COL4A3-204ENST00000469504 KIF15Q9NS87 1388 aa17.12■□□□□ 0.33
COL4A3-204ENST00000469504 ABCC5O15440 1437 aa17.12■□□□□ 0.33
COL4A3-204ENST00000469504 SPATA31D1Q6ZQQ2 1576 aa17.11■□□□□ 0.33
COL4A3-204ENST00000469504 UGGT1Q9NYU2 1555 aa17.11■□□□□ 0.33
COL4A3-204ENST00000469504 ANKLE2Q86XL3 938 aa17.1■□□□□ 0.33
COL4A3-204ENST00000469504 DAPK1P53355 1430 aa17.1■□□□□ 0.33
COL4A3-204ENST00000469504 CROCC2H7BZ55 1655 aa17.1■□□□□ 0.33
COL4A3-204ENST00000469504 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
COL4A3-204ENST00000469504 ARHGAP31Q2M1Z3 1444 aa17.09■□□□□ 0.33
COL4A3-204ENST00000469504 MROH1Q8NDA8 1641 aa17.09■□□□□ 0.33
COL4A3-204ENST00000469504 PRDM15P57071 1507 aaPredicted RBP17.08■□□□□ 0.32
COL4A3-204ENST00000469504 ERVK-7P63135 1459 aa17.07■□□□□ 0.32
COL4A3-204ENST00000469504 ANKRD30AQ9BXX3 1397 aa17.07■□□□□ 0.32
COL4A3-204ENST00000469504 POLR1AO95602 1720 aaPredicted RBP17.07■□□□□ 0.32
COL4A3-204ENST00000469504 MED14O60244 1454 aa17.06■□□□□ 0.32
COL4A3-204ENST00000469504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.06■□□□□ 0.32
COL4A3-204ENST00000469504 DEPDC5O75140 1603 aa17.06■□□□□ 0.32
COL4A3-204ENST00000469504 KANK1Q14678 1352 aa17.05■□□□□ 0.32
COL4A3-204ENST00000469504 NEURL4Q96JN8 1562 aa17.05■□□□□ 0.32
COL4A3-204ENST00000469504 CPS1P31327 1500 aa17.05■□□□□ 0.32
COL4A3-204ENST00000469504 RRP7BPQ9NSQ0 103 aa17.04■□□□□ 0.32
COL4A3-204ENST00000469504 NPHP4O75161 1426 aaPredicted RBP17.02■□□□□ 0.31
COL4A3-204ENST00000469504 ADGRL2O95490 1459 aa17.01■□□□□ 0.31
COL4A3-204ENST00000469504 LMTK2Q8IWU2 1503 aa17.01■□□□□ 0.31
COL4A3-204ENST00000469504 CEP152O94986 1710 aa16.99■□□□□ 0.31
COL4A3-204ENST00000469504 UBAP1LF5GYI3 381 aa16.99■□□□□ 0.31
COL4A3-204ENST00000469504 VWDEQ8N2E2 1590 aa16.97■□□□□ 0.31
COL4A3-204ENST00000469504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.96■□□□□ 0.31
COL4A3-204ENST00000469504 CHIC2Q9UKJ5 165 aa16.96■□□□□ 0.31
COL4A3-204ENST00000469504 IQGAP1P46940 1657 aa16.96■□□□□ 0.31
COL4A3-204ENST00000469504 SLIT1O75093 1534 aa16.96■□□□□ 0.3
COL4A3-204ENST00000469504 SCAF11Q99590 1463 aaKnown RBP16.95■□□□□ 0.3
COL4A3-204ENST00000469504 ARHGAP23Q9P227 1491 aa16.95■□□□□ 0.3
COL4A3-204ENST00000469504 TOM1O60784 492 aa16.95■□□□□ 0.3
COL4A3-204ENST00000469504 UBR1Q8IWV7 1749 aa16.95■□□□□ 0.3
COL4A3-204ENST00000469504 FAM50AQ14320 339 aaKnown RBP16.94■□□□□ 0.3
COL4A3-204ENST00000469504 EID1Q9Y6B2 187 aa16.93■□□□□ 0.3
COL4A3-204ENST00000469504 ANKRD50Q9ULJ7 1429 aa16.93■□□□□ 0.3
COL4A3-204ENST00000469504 KDM5AP29375 1690 aaKnown RBP16.92■□□□□ 0.3
COL4A3-204ENST00000469504 RPRD2Q5VT52 1461 aaKnown RBP16.92■□□□□ 0.3
COL4A3-204ENST00000469504 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
COL4A3-204ENST00000469504 DISP3Q9P2K9 1392 aa16.9■□□□□ 0.3
COL4A3-204ENST00000469504 NOS1P29475 1434 aa16.9■□□□□ 0.3
COL4A3-204ENST00000469504 TXNDC2Q86VQ3 553 aa16.9■□□□□ 0.3
COL4A3-204ENST00000469504 SLC52A1Q9NWF4 448 aa16.9■□□□□ 0.3
COL4A3-204ENST00000469504 STAG3Q9UJ98 1225 aa16.9■□□□□ 0.3
COL4A3-204ENST00000469504 ROCK1Q13464 1354 aa16.89■□□□□ 0.3
COL4A3-204ENST00000469504 TMEM2Q9UHN6 1383 aa16.89■□□□□ 0.3
COL4A3-204ENST00000469504 SYNMO15061 1565 aa16.89■□□□□ 0.3
COL4A3-204ENST00000469504 LTKP29376 864 aa16.87■□□□□ 0.29
COL4A3-204ENST00000469504 PIK3C2BO00750 1634 aa16.86■□□□□ 0.29
COL4A3-204ENST00000469504 IDI1Q13907 227 aa16.86■□□□□ 0.29
COL4A3-204ENST00000469504 CFAP65Q6ZU64 1925 aaKnown RBP16.85■□□□□ 0.29
COL4A3-204ENST00000469504 LRRC7Q96NW7 1537 aa16.85■□□□□ 0.29
COL4A3-204ENST00000469504 ADGRB3O60242 1522 aa16.83■□□□□ 0.28
COL4A3-204ENST00000469504 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
COL4A3-204ENST00000469504 TET3O43151 1660 aa16.81■□□□□ 0.28
COL4A3-204ENST00000469504 UNC13BO14795 1591 aa16.81■□□□□ 0.28
COL4A3-204ENST00000469504 HDGFP51858 240 aaKnown RBP16.81■□□□□ 0.28
COL4A3-204ENST00000469504 PIP4K2BP78356 416 aa16.81■□□□□ 0.28
COL4A3-204ENST00000469504 HSPA1LP34931 641 aa16.78■□□□□ 0.28
COL4A3-204ENST00000469504 STRCP1A6NGW2 1772 aa16.78■□□□□ 0.28
COL4A3-204ENST00000469504 GCC2Q8IWJ2 1684 aa16.78■□□□□ 0.28
COL4A3-204ENST00000469504 KCNA6P17658 529 aa16.77■□□□□ 0.28
COL4A3-204ENST00000469504 ALKQ9UM73 1620 aa16.77■□□□□ 0.27
COL4A3-204ENST00000469504 IQGAP3Q86VI3 1631 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms