RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 GABBR2O75899 941 aa12.77□□□□□ -0.37
GAPVD1-213ENST00000469498 SHANK2Q9UPX8 1470 aa12.77□□□□□ -0.37
GAPVD1-213ENST00000469498 ZFYVE16Q7Z3T8 1539 aa12.77□□□□□ -0.37
GAPVD1-213ENST00000469498 PLXNC1O60486 1568 aa12.77□□□□□ -0.37
GAPVD1-213ENST00000469498 ITGAEP38570 1179 aa12.76□□□□□ -0.37
GAPVD1-213ENST00000469498 HNRNPMP52272 730 aaKnown RBP eCLIP12.76□□□□□ -0.37
GAPVD1-213ENST00000469498 PLSCR2Q9NRY7 297 aa12.76□□□□□ -0.37
GAPVD1-213ENST00000469498 ABCC5O15440 1437 aa12.76□□□□□ -0.37
GAPVD1-213ENST00000469498 DENND4BO75064 1496 aaPredicted RBP12.76□□□□□ -0.37
GAPVD1-213ENST00000469498 ZNF518AQ6AHZ1 1483 aa12.76□□□□□ -0.37
GAPVD1-213ENST00000469498 ATP7AQ04656 1500 aa12.76□□□□□ -0.37
GAPVD1-213ENST00000469498 ZMYM4Q5VZL5 1548 aa12.76□□□□□ -0.37
GAPVD1-213ENST00000469498 ABCA6Q8N139 1617 aa12.76□□□□□ -0.37
GAPVD1-213ENST00000469498 TRIM26Q12899 539 aaPredicted RBP12.75□□□□□ -0.37
GAPVD1-213ENST00000469498 PTPRKQ15262 1439 aa12.74□□□□□ -0.37
GAPVD1-213ENST00000469498 C9orf84Q5VXU9 1444 aa12.73□□□□□ -0.37
GAPVD1-213ENST00000469498 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
GAPVD1-213ENST00000469498 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
GAPVD1-213ENST00000469498 SPDYE2Q495Y8 402 aa12.73□□□□□ -0.37
GAPVD1-213ENST00000469498 COL17A1Q9UMD9 1497 aaPredicted RBP12.72□□□□□ -0.37
GAPVD1-213ENST00000469498 DIP2CQ9Y2E4 1556 aa12.72□□□□□ -0.37
GAPVD1-213ENST00000469498 ARHGEF40Q8TER5 1519 aa12.72□□□□□ -0.37
GAPVD1-213ENST00000469498 SPDYE1Q8NFV5 336 aaPredicted RBP12.71□□□□□ -0.37
GAPVD1-213ENST00000469498 ADGRL2O95490 1459 aa12.71□□□□□ -0.38
GAPVD1-213ENST00000469498 SIGLEC1Q9BZZ2 1709 aa12.69□□□□□ -0.38
GAPVD1-213ENST00000469498 RAPGEF3O95398 923 aa12.69□□□□□ -0.38
GAPVD1-213ENST00000469498 CHIC2Q9UKJ5 165 aa12.69□□□□□ -0.38
GAPVD1-213ENST00000469498 CLEC11AQ9Y240 323 aa12.69□□□□□ -0.38
GAPVD1-213ENST00000469498 AFAP1Q8N556 730 aa12.68□□□□□ -0.38
GAPVD1-213ENST00000469498 SPAG9O60271 1321 aaKnown RBP12.67□□□□□ -0.38
GAPVD1-213ENST00000469498 MLH3Q9UHC1 1453 aa12.67□□□□□ -0.38
GAPVD1-213ENST00000469498 PCGF6Q9BYE7 350 aa12.67□□□□□ -0.38
GAPVD1-213ENST00000469498 RSPH4AQ5TD94 716 aa12.66□□□□□ -0.38
GAPVD1-213ENST00000469498 MYT1LQ9UL68 1186 aa12.66□□□□□ -0.38
GAPVD1-213ENST00000469498 EIF2AK4Q9P2K8 1649 aaKnown RBP12.66□□□□□ -0.38
GAPVD1-213ENST00000469498 RTEL1-TNFRSF6BF6WH68 1400 aa12.65□□□□□ -0.38
GAPVD1-213ENST00000469498 YEATS2Q9ULM3 1422 aa12.65□□□□□ -0.38
GAPVD1-213ENST00000469498 TSPY4P0CV99 314 aa12.65□□□□□ -0.38
GAPVD1-213ENST00000469498 TSPY10P0CW01 314 aa12.65□□□□□ -0.38
GAPVD1-213ENST00000469498 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
GAPVD1-213ENST00000469498 DUOX2Q9NRD8 1548 aa12.65□□□□□ -0.38
GAPVD1-213ENST00000469498 ROCK1Q13464 1354 aa12.65□□□□□ -0.38
GAPVD1-213ENST00000469498 ANKRD30AQ9BXX3 1397 aa12.65□□□□□ -0.38
GAPVD1-213ENST00000469498 NCOA1Q15788 1441 aa12.64□□□□□ -0.39
GAPVD1-213ENST00000469498 RRP7BPQ9NSQ0 103 aa12.64□□□□□ -0.39
GAPVD1-213ENST00000469498 BCORL1Q5H9F3 1711 aa12.64□□□□□ -0.39
GAPVD1-213ENST00000469498 KIF15Q9NS87 1388 aa12.64□□□□□ -0.39
GAPVD1-213ENST00000469498 MAGI2Q86UL8 1455 aa12.64□□□□□ -0.39
GAPVD1-213ENST00000469498 HFM1A2PYH4 1435 aa12.63□□□□□ -0.39
GAPVD1-213ENST00000469498 NAIPQ13075 1403 aa12.62□□□□□ -0.39
GAPVD1-213ENST00000469498 CEP152O94986 1710 aa12.62□□□□□ -0.39
GAPVD1-213ENST00000469498 REREQ9P2R6 1566 aa12.62□□□□□ -0.39
GAPVD1-213ENST00000469498 DEPDC5O75140 1603 aa12.62□□□□□ -0.39
GAPVD1-213ENST00000469498 UNC13BO14795 1591 aa12.61□□□□□ -0.39
GAPVD1-213ENST00000469498 RNF17Q9BXT8 1623 aaKnown RBP12.61□□□□□ -0.39
GAPVD1-213ENST00000469498 A2MP01023 1474 aa12.6□□□□□ -0.39
GAPVD1-213ENST00000469498 ERBINQ96RT1 1412 aa12.59□□□□□ -0.39
GAPVD1-213ENST00000469498 SETD5Q9C0A6 1442 aa12.59□□□□□ -0.39
GAPVD1-213ENST00000469498 MROH1Q8NDA8 1641 aa12.59□□□□□ -0.39
GAPVD1-213ENST00000469498 ANKRD50Q9ULJ7 1429 aa12.58□□□□□ -0.4
GAPVD1-213ENST00000469498 ATP10AO60312 1499 aa12.58□□□□□ -0.4
GAPVD1-213ENST00000469498 RAB3GAP2Q9H2M9 1393 aa12.56□□□□□ -0.4
GAPVD1-213ENST00000469498 FER1L4A9Z1Z3 1794 aa12.56□□□□□ -0.4
GAPVD1-213ENST00000469498 IQGAP3Q86VI3 1631 aa12.56□□□□□ -0.4
GAPVD1-213ENST00000469498 PRDM15P57071 1507 aaPredicted RBP12.56□□□□□ -0.4
GAPVD1-213ENST00000469498 ZC3H13Q5T200 1668 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-213ENST00000469498 CFAP65Q6ZU64 1925 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-213ENST00000469498 CLTCQ00610 1675 aaKnown RBP12.54□□□□□ -0.4
GAPVD1-213ENST00000469498 AGLP35573 1532 aa12.54□□□□□ -0.4
GAPVD1-213ENST00000469498 FKBP8Q14318 412 aa12.54□□□□□ -0.4
GAPVD1-213ENST00000469498 DHX29Q7Z478 1369 aaKnown RBP12.54□□□□□ -0.4
GAPVD1-213ENST00000469498 CAMSAP1Q5T5Y3 1602 aa12.53□□□□□ -0.4
GAPVD1-213ENST00000469498 KDM5DQ9BY66 1539 aa12.52□□□□□ -0.4
GAPVD1-213ENST00000469498 TET3O43151 1660 aa12.52□□□□□ -0.4
GAPVD1-213ENST00000469498 E9PCH4 1651 aa12.51□□□□□ -0.41
GAPVD1-213ENST00000469498 VWDEQ8N2E2 1590 aa12.5□□□□□ -0.41
GAPVD1-213ENST00000469498 RIMS1Q86UR5 1692 aaKnown RBP12.5□□□□□ -0.41
GAPVD1-213ENST00000469498 FAM135AQ9P2D6 1515 aa12.49□□□□□ -0.41
GAPVD1-213ENST00000469498 KIF3BO15066 747 aa12.49□□□□□ -0.41
GAPVD1-213ENST00000469498 MROH2AA6NES4 1674 aa12.48□□□□□ -0.41
GAPVD1-213ENST00000469498 PZPP20742 1482 aa12.48□□□□□ -0.41
GAPVD1-213ENST00000469498 CLCN6P51797 869 aa12.48□□□□□ -0.41
GAPVD1-213ENST00000469498 SPHKAPQ2M3C7 1700 aa12.48□□□□□ -0.41
GAPVD1-213ENST00000469498 MADDQ8WXG6 1647 aa12.48□□□□□ -0.41
GAPVD1-213ENST00000469498 ABCC3O15438 1527 aa12.47□□□□□ -0.41
GAPVD1-213ENST00000469498 ADAMTSL3P82987 1691 aa12.47□□□□□ -0.41
GAPVD1-213ENST00000469498 ARID4BQ4LE39 1312 aaPredicted RBP12.46□□□□□ -0.41
GAPVD1-213ENST00000469498 TRIM52Q96A61 297 aa12.46□□□□□ -0.41
GAPVD1-213ENST00000469498 EFCAB6Q5THR3 1501 aa12.46□□□□□ -0.42
GAPVD1-213ENST00000469498 C3P01024 1663 aa12.45□□□□□ -0.42
GAPVD1-213ENST00000469498 PREX1Q8TCU6 1659 aa12.45□□□□□ -0.42
GAPVD1-213ENST00000469498 NUP155O75694 1391 aa12.44□□□□□ -0.42
GAPVD1-213ENST00000469498 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
GAPVD1-213ENST00000469498 KANK1Q14678 1352 aa12.43□□□□□ -0.42
GAPVD1-213ENST00000469498 LMTK2Q8IWU2 1503 aa12.43□□□□□ -0.42
GAPVD1-213ENST00000469498 MLECQ14165 292 aa12.43□□□□□ -0.42
GAPVD1-213ENST00000469498 GGT6Q6P531 493 aa12.43□□□□□ -0.42
GAPVD1-213ENST00000469498 ZNF692Q9BU19 519 aaPredicted RBP12.43□□□□□ -0.42
GAPVD1-213ENST00000469498 DHX57Q6P158 1386 aaKnown RBP12.42□□□□□ -0.42
GAPVD1-213ENST00000469498 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms