RNA–Protein interactions for RNA: ENST00000469312.6

LINC01140-203, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 5 BASIC

Gene LINC01140, Length 1,298 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-203ENST00000469312 DAPK1P53355 1430 aa18.19■□□□□ 0.5
LINC01140-203ENST00000469312 SHANK2Q9UPX8 1470 aa18.19■□□□□ 0.5
LINC01140-203ENST00000469312 PREX1Q8TCU6 1659 aa18.18■□□□□ 0.5
LINC01140-203ENST00000469312 ABCC5O15440 1437 aa18.17■□□□□ 0.5
LINC01140-203ENST00000469312 CNTLNQ9NXG0 1405 aa18.17■□□□□ 0.5
LINC01140-203ENST00000469312 PPARGC1BQ86YN6 1023 aaKnown RBP18.17■□□□□ 0.5
LINC01140-203ENST00000469312 CEBPAP49715 358 aaPredicted RBP18.16■□□□□ 0.5
LINC01140-203ENST00000469312 GGT6Q6P531 493 aa18.16■□□□□ 0.5
LINC01140-203ENST00000469312 LMTK3Q96Q04 1460 aa18.15■□□□□ 0.5
LINC01140-203ENST00000469312 FAM50AQ14320 339 aaKnown RBP18.15■□□□□ 0.5
LINC01140-203ENST00000469312 EIF2AK4Q9P2K8 1649 aaKnown RBP18.15■□□□□ 0.5
LINC01140-203ENST00000469312 KIF3BO15066 747 aa18.13■□□□□ 0.49
LINC01140-203ENST00000469312 DUOX2Q9NRD8 1548 aa18.13■□□□□ 0.49
LINC01140-203ENST00000469312 RNF17Q9BXT8 1623 aaKnown RBP18.12■□□□□ 0.49
LINC01140-203ENST00000469312 KDM5DQ9BY66 1539 aa18.11■□□□□ 0.49
LINC01140-203ENST00000469312 KIF15Q9NS87 1388 aa18.1■□□□□ 0.49
LINC01140-203ENST00000469312 HOXD11P31277 338 aaPredicted RBP18.09■□□□□ 0.49
LINC01140-203ENST00000469312 FAM135AQ9P2D6 1515 aa18.08■□□□□ 0.49
LINC01140-203ENST00000469312 CHIC2Q9UKJ5 165 aa18.08■□□□□ 0.48
LINC01140-203ENST00000469312 ZC3H13Q5T200 1668 aaKnown RBP18.08■□□□□ 0.48
LINC01140-203ENST00000469312 UHRF1BP1Q6BDS2 1440 aa18.07■□□□□ 0.48
LINC01140-203ENST00000469312 ZMYM3Q14202 1370 aa18.07■□□□□ 0.48
LINC01140-203ENST00000469312 CEP152O94986 1710 aa18.07■□□□□ 0.48
LINC01140-203ENST00000469312 RRP7BPQ9NSQ0 103 aa18.07■□□□□ 0.48
LINC01140-203ENST00000469312 MROH1Q8NDA8 1641 aa18.06■□□□□ 0.48
LINC01140-203ENST00000469312 ERBINQ96RT1 1412 aa18.06■□□□□ 0.48
LINC01140-203ENST00000469312 ANKRD30AQ9BXX3 1397 aa18.05■□□□□ 0.48
LINC01140-203ENST00000469312 SETD1BQ9UPS6 1966 aaKnown RBP18.05■□□□□ 0.48
LINC01140-203ENST00000469312 ADGRL2O95490 1459 aa18.05■□□□□ 0.48
LINC01140-203ENST00000469312 MYO3AQ8NEV4 1616 aa18.05■□□□□ 0.48
LINC01140-203ENST00000469312 HSPA2P54652 639 aa18.04■□□□□ 0.48
LINC01140-203ENST00000469312 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.04■□□□□ 0.48
LINC01140-203ENST00000469312 NPATQ14207 1427 aa18.03■□□□□ 0.48
LINC01140-203ENST00000469312 ABCC3O15438 1527 aa18.02■□□□□ 0.47
LINC01140-203ENST00000469312 PRDM15P57071 1507 aaPredicted RBP18.02■□□□□ 0.47
LINC01140-203ENST00000469312 DEPDC5O75140 1603 aa18.01■□□□□ 0.47
LINC01140-203ENST00000469312 CAMSAP1Q5T5Y3 1602 aa18.01■□□□□ 0.47
LINC01140-203ENST00000469312 WASHC2CQ9Y4E1 1318 aa18.01■□□□□ 0.47
LINC01140-203ENST00000469312 NCOA1Q15788 1441 aa18.01■□□□□ 0.47
LINC01140-203ENST00000469312 ZNF142P52746 1687 aaPredicted RBP18■□□□□ 0.47
LINC01140-203ENST00000469312 PTPRKQ15262 1439 aa18■□□□□ 0.47
LINC01140-203ENST00000469312 PZPP20742 1482 aa17.99■□□□□ 0.47
LINC01140-203ENST00000469312 ITGAEP38570 1179 aa17.98■□□□□ 0.47
LINC01140-203ENST00000469312 CEP170BQ9Y4F5 1589 aaPredicted RBP17.97■□□□□ 0.47
LINC01140-203ENST00000469312 RRBP1Q9P2E9 1410 aaKnown RBP17.96■□□□□ 0.47
LINC01140-203ENST00000469312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.46
LINC01140-203ENST00000469312 STRCQ7RTU9 1775 aa17.94■□□□□ 0.46
LINC01140-203ENST00000469312 ANKRD50Q9ULJ7 1429 aa17.93■□□□□ 0.46
LINC01140-203ENST00000469312 CFAP65Q6ZU64 1925 aaKnown RBP17.93■□□□□ 0.46
LINC01140-203ENST00000469312 KANK1Q14678 1352 aa17.92■□□□□ 0.46
LINC01140-203ENST00000469312 TNRQ92752 1358 aa17.92■□□□□ 0.46
LINC01140-203ENST00000469312 FBXO31Q5XUX0 539 aaPredicted RBP17.92■□□□□ 0.46
LINC01140-203ENST00000469312 ROCK1Q13464 1354 aa17.91■□□□□ 0.46
LINC01140-203ENST00000469312 SPATA31D1Q6ZQQ2 1576 aa17.91■□□□□ 0.46
LINC01140-203ENST00000469312 UNC13BO14795 1591 aa17.9■□□□□ 0.46
LINC01140-203ENST00000469312 VWDEQ8N2E2 1590 aa17.9■□□□□ 0.46
LINC01140-203ENST00000469312 A2ML1A8K2U0 1454 aa17.89■□□□□ 0.45
LINC01140-203ENST00000469312 ERVK-7P63135 1459 aa17.89■□□□□ 0.45
LINC01140-203ENST00000469312 LMTK2Q8IWU2 1503 aa17.88■□□□□ 0.45
LINC01140-203ENST00000469312 EFCAB6Q5THR3 1501 aa17.87■□□□□ 0.45
LINC01140-203ENST00000469312 GCC2Q8IWJ2 1684 aa17.86■□□□□ 0.45
LINC01140-203ENST00000469312 NLRP1Q9C000 1473 aa17.85■□□□□ 0.45
LINC01140-203ENST00000469312 POLR1AO95602 1720 aaPredicted RBP17.84■□□□□ 0.45
LINC01140-203ENST00000469312 TET3O43151 1660 aa17.84■□□□□ 0.45
LINC01140-203ENST00000469312 ARHGAP31Q2M1Z3 1444 aa17.84■□□□□ 0.45
LINC01140-203ENST00000469312 ZBTB22O15209 634 aa17.84■□□□□ 0.45
LINC01140-203ENST00000469312 UGGT1Q9NYU2 1555 aa17.83■□□□□ 0.45
LINC01140-203ENST00000469312 PLA2R1Q13018 1463 aa17.82■□□□□ 0.44
LINC01140-203ENST00000469312 IQGAP3Q86VI3 1631 aa17.82■□□□□ 0.44
LINC01140-203ENST00000469312 UBR1Q8IWV7 1749 aa17.81■□□□□ 0.44
LINC01140-203ENST00000469312 PIK3C2BO00750 1634 aa17.79■□□□□ 0.44
LINC01140-203ENST00000469312 SYNMO15061 1565 aa17.79■□□□□ 0.44
LINC01140-203ENST00000469312 NCKAP5LQ9HCH0 1330 aa17.78■□□□□ 0.44
LINC01140-203ENST00000469312 PTPRTO14522 1441 aa17.78■□□□□ 0.44
LINC01140-203ENST00000469312 E9PCH4 1651 aa17.77■□□□□ 0.44
LINC01140-203ENST00000469312 RPRD2Q5VT52 1461 aaKnown RBP17.75■□□□□ 0.43
LINC01140-203ENST00000469312 NAIPQ13075 1403 aa17.75■□□□□ 0.43
LINC01140-203ENST00000469312 NUP155O75694 1391 aa17.75■□□□□ 0.43
LINC01140-203ENST00000469312 NEURL4Q96JN8 1562 aa17.74■□□□□ 0.43
LINC01140-203ENST00000469312 PKD2Q13563 968 aa17.74■□□□□ 0.43
LINC01140-203ENST00000469312 ACIN1Q9UKV3 1341 aaKnown RBP17.73■□□□□ 0.43
LINC01140-203ENST00000469312 NOS1P29475 1434 aa17.73■□□□□ 0.43
LINC01140-203ENST00000469312 THEMISQ8N1K5 641 aaPredicted RBP17.73■□□□□ 0.43
LINC01140-203ENST00000469312 FOXD4L1Q9NU39 408 aa17.73■□□□□ 0.43
LINC01140-203ENST00000469312 HFM1A2PYH4 1435 aa17.72■□□□□ 0.43
LINC01140-203ENST00000469312 ADGRB3O60242 1522 aa17.71■□□□□ 0.43
LINC01140-203ENST00000469312 KDM5AP29375 1690 aaKnown RBP17.71■□□□□ 0.42
LINC01140-203ENST00000469312 IQGAP1P46940 1657 aa17.7■□□□□ 0.42
LINC01140-203ENST00000469312 MYO5BQ9ULV0 1848 aa17.7■□□□□ 0.42
LINC01140-203ENST00000469312 STAG3Q9UJ98 1225 aa17.69■□□□□ 0.42
LINC01140-203ENST00000469312 SPHKAPQ2M3C7 1700 aa17.69■□□□□ 0.42
LINC01140-203ENST00000469312 ANKLE2Q86XL3 938 aa17.68■□□□□ 0.42
LINC01140-203ENST00000469312 NPHP4O75161 1426 aaPredicted RBP17.66■□□□□ 0.42
LINC01140-203ENST00000469312 SLIT1O75093 1534 aa17.66■□□□□ 0.42
LINC01140-203ENST00000469312 SCAF11Q99590 1463 aaKnown RBP17.65■□□□□ 0.42
LINC01140-203ENST00000469312 ARHGAP23Q9P227 1491 aa17.65■□□□□ 0.42
LINC01140-203ENST00000469312 IDI1Q13907 227 aa17.65■□□□□ 0.42
LINC01140-203ENST00000469312 LTBP4Q8N2S1 1624 aa17.65■□□□□ 0.42
LINC01140-203ENST00000469312 MED14O60244 1454 aa17.64■□□□□ 0.41
LINC01140-203ENST00000469312 TRIM52Q96A61 297 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms