RNA–Protein interactions for RNA: ENST00000469114.1

UPK3B-204, Transcript of uroplakin 3B, humanhuman

TSL 3

Gene UPK3B, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-204ENST00000469114 TNRQ92752 1358 aa31.47■■■□□ 2.63
UPK3B-204ENST00000469114 FAM135AQ9P2D6 1515 aa31.47■■■□□ 2.63
UPK3B-204ENST00000469114 KDM5DQ9BY66 1539 aa31.44■■■□□ 2.62
UPK3B-204ENST00000469114 KIF3BO15066 747 aa31.44■■■□□ 2.62
UPK3B-204ENST00000469114 CPS1P31327 1500 aa31.44■■■□□ 2.62
UPK3B-204ENST00000469114 PZPP20742 1482 aa31.43■■■□□ 2.62
UPK3B-204ENST00000469114 CCDC141Q6ZP82 1450 aa31.43■■■□□ 2.62
UPK3B-204ENST00000469114 NEURL4Q96JN8 1562 aa31.43■■■□□ 2.62
UPK3B-204ENST00000469114 FBXO31Q5XUX0 539 aaPredicted RBP31.41■■■□□ 2.62
UPK3B-204ENST00000469114 SCAF1Q9H7N4 1312 aaKnown RBP31.39■■■□□ 2.62
UPK3B-204ENST00000469114 SHANK2Q9UPX8 1470 aa31.39■■■□□ 2.62
UPK3B-204ENST00000469114 TOM1O60784 492 aa31.37■■■□□ 2.61
UPK3B-204ENST00000469114 RSPH4AQ5TD94 716 aa31.37■■■□□ 2.61
UPK3B-204ENST00000469114 WASHC2CQ9Y4E1 1318 aa31.37■■■□□ 2.61
UPK3B-204ENST00000469114 CAMSAP2Q08AD1 1489 aa31.37■■■□□ 2.61
UPK3B-204ENST00000469114 PIP4K2BP78356 416 aa31.35■■■□□ 2.61
UPK3B-204ENST00000469114 ANKLE2Q86XL3 938 aa31.35■■■□□ 2.61
UPK3B-204ENST00000469114 HSPA1LP34931 641 aa31.34■■■□□ 2.61
UPK3B-204ENST00000469114 NLRP1Q9C000 1473 aa31.33■■■□□ 2.61
UPK3B-204ENST00000469114 THEMISQ8N1K5 641 aaPredicted RBP31.33■■■□□ 2.61
UPK3B-204ENST00000469114 NCOA2Q15596 1464 aa31.33■■■□□ 2.61
UPK3B-204ENST00000469114 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.32■■■□□ 2.6
UPK3B-204ENST00000469114 MIA2Q96PC5 1412 aa31.32■■■□□ 2.6
UPK3B-204ENST00000469114 MED1Q15648 1581 aaPredicted RBP31.3■■■□□ 2.6
UPK3B-204ENST00000469114 UGGT1Q9NYU2 1555 aa31.3■■■□□ 2.6
UPK3B-204ENST00000469114 VWDEQ8N2E2 1590 aa31.29■■■□□ 2.6
UPK3B-204ENST00000469114 DEPDC5O75140 1603 aa31.28■■■□□ 2.6
UPK3B-204ENST00000469114 ARHGEF5Q12774 1597 aa31.28■■■□□ 2.6
UPK3B-204ENST00000469114 MED14O60244 1454 aa31.27■■■□□ 2.6
UPK3B-204ENST00000469114 NPHP4O75161 1426 aaPredicted RBP31.26■■■□□ 2.6
UPK3B-204ENST00000469114 TSPY4P0CV99 314 aa31.25■■■□□ 2.59
UPK3B-204ENST00000469114 TSPY10P0CW01 314 aa31.25■■■□□ 2.59
UPK3B-204ENST00000469114 IQGAP1P46940 1657 aa31.2■■■□□ 2.59
UPK3B-204ENST00000469114 RNF17Q9BXT8 1623 aaKnown RBP31.2■■■□□ 2.58
UPK3B-204ENST00000469114 ZC3H13Q5T200 1668 aaKnown RBP31.19■■■□□ 2.58
UPK3B-204ENST00000469114 ABCC3O15438 1527 aa31.16■■■□□ 2.58
UPK3B-204ENST00000469114 ALKQ9UM73 1620 aa31.14■■■□□ 2.58
UPK3B-204ENST00000469114 MAST1Q9Y2H9 1570 aa31.13■■■□□ 2.57
UPK3B-204ENST00000469114 EIF2AK4Q9P2K8 1649 aaKnown RBP31.13■■■□□ 2.57
UPK3B-204ENST00000469114 SYNMO15061 1565 aa31.1■■■□□ 2.57
UPK3B-204ENST00000469114 ERVK-7P63135 1459 aa31.1■■■□□ 2.57
UPK3B-204ENST00000469114 PHF23Q9BUL5 403 aaPredicted RBP31.1■■■□□ 2.57
UPK3B-204ENST00000469114 STRCP1A6NGW2 1772 aa31.09■■■□□ 2.57
UPK3B-204ENST00000469114 LRRC7Q96NW7 1537 aa31.08■■■□□ 2.57
UPK3B-204ENST00000469114 LRRC9Q6ZRR7 1453 aa31.06■■■□□ 2.56
UPK3B-204ENST00000469114 MROH1Q8NDA8 1641 aa31.04■■■□□ 2.56
UPK3B-204ENST00000469114 CEP152O94986 1710 aa31.03■■■□□ 2.56
UPK3B-204ENST00000469114 UBR1Q8IWV7 1749 aa31.03■■■□□ 2.56
UPK3B-204ENST00000469114 CFAP65Q6ZU64 1925 aaKnown RBP31.02■■■□□ 2.56
UPK3B-204ENST00000469114 SCAF11Q99590 1463 aaKnown RBP30.99■■■□□ 2.55
UPK3B-204ENST00000469114 DUOX2Q9NRD8 1548 aa30.98■■■□□ 2.55
UPK3B-204ENST00000469114 VPS8Q8N3P4 1428 aa30.98■■■□□ 2.55
UPK3B-204ENST00000469114 SENP3Q9H4L4 574 aaPredicted RBP30.97■■■□□ 2.55
UPK3B-204ENST00000469114 MYOM3Q5VTT5 1437 aa30.94■■■□□ 2.54
UPK3B-204ENST00000469114 ARHGAP23Q9P227 1491 aa30.93■■■□□ 2.54
UPK3B-204ENST00000469114 SLIT1O75093 1534 aa30.93■■■□□ 2.54
UPK3B-204ENST00000469114 ARHGAP31Q2M1Z3 1444 aa30.9■■■□□ 2.54
UPK3B-204ENST00000469114 MAP3K1Q13233 1512 aa30.9■■■□□ 2.54
UPK3B-204ENST00000469114 TXNDC2Q86VQ3 553 aa30.9■■■□□ 2.54
UPK3B-204ENST00000469114 PRDM15P57071 1507 aaPredicted RBP30.89■■■□□ 2.54
UPK3B-204ENST00000469114 LTKP29376 864 aa30.89■■■□□ 2.54
UPK3B-204ENST00000469114 EID1Q9Y6B2 187 aa30.87■■■□□ 2.53
UPK3B-204ENST00000469114 KANK4Q5T7N3 995 aaPredicted RBP30.86■■■□□ 2.53
UPK3B-204ENST00000469114 KIF15Q9NS87 1388 aa30.86■■■□□ 2.53
UPK3B-204ENST00000469114 ERBINQ96RT1 1412 aa30.85■■■□□ 2.53
UPK3B-204ENST00000469114 XIRP1Q702N8 1843 aaKnown RBP30.84■■■□□ 2.53
UPK3B-204ENST00000469114 CROCC2H7BZ55 1655 aa30.81■■■□□ 2.52
UPK3B-204ENST00000469114 PIK3C2BO00750 1634 aa30.81■■■□□ 2.52
UPK3B-204ENST00000469114 TMEM2Q9UHN6 1383 aa30.79■■■□□ 2.52
UPK3B-204ENST00000469114 KANK1Q14678 1352 aa30.78■■■□□ 2.52
UPK3B-204ENST00000469114 ABCC5O15440 1437 aa30.77■■■□□ 2.52
UPK3B-204ENST00000469114 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.77■■■□□ 2.52
UPK3B-204ENST00000469114 RRP7BPQ9NSQ0 103 aa30.77■■■□□ 2.52
UPK3B-204ENST00000469114 STAG3Q9UJ98 1225 aa30.77■■■□□ 2.52
UPK3B-204ENST00000469114 KDM5AP29375 1690 aaKnown RBP30.75■■■□□ 2.51
UPK3B-204ENST00000469114 FAM135BQ49AJ0 1406 aa30.74■■■□□ 2.51
UPK3B-204ENST00000469114 EFCAB6Q5THR3 1501 aa30.73■■■□□ 2.51
UPK3B-204ENST00000469114 PTPN23Q9H3S7 1636 aa30.73■■■□□ 2.51
UPK3B-204ENST00000469114 RGS17Q9UGC6 210 aaPredicted RBP30.72■■■□□ 2.51
UPK3B-204ENST00000469114 TMEM94Q12767 1356 aa30.7■■■□□ 2.51
UPK3B-204ENST00000469114 LMTK2Q8IWU2 1503 aa30.69■■■□□ 2.5
UPK3B-204ENST00000469114 DAPK1P53355 1430 aa30.69■■■□□ 2.5
UPK3B-204ENST00000469114 LOC105371045A0A1W2PR82 267 aa30.68■■■□□ 2.5
UPK3B-204ENST00000469114 KCNA6P17658 529 aa30.67■■■□□ 2.5
UPK3B-204ENST00000469114 IDI1Q13907 227 aa30.66■■■□□ 2.5
UPK3B-204ENST00000469114 TET3O43151 1660 aa30.64■■■□□ 2.5
UPK3B-204ENST00000469114 ROBO1Q9Y6N7 1651 aa30.63■■■□□ 2.49
UPK3B-204ENST00000469114 PROSER2Q86WR7 435 aaPredicted RBP30.63■■■□□ 2.49
UPK3B-204ENST00000469114 ANKRD30AQ9BXX3 1397 aa30.63■■■□□ 2.49
UPK3B-204ENST00000469114 SLC26A8Q96RN1 970 aa30.62■■■□□ 2.49
UPK3B-204ENST00000469114 APLP2Q06481 763 aa30.61■■■□□ 2.49
UPK3B-204ENST00000469114 ADGRB3O60242 1522 aa30.61■■■□□ 2.49
UPK3B-204ENST00000469114 FGD6Q6ZV73 1430 aa30.6■■■□□ 2.49
UPK3B-204ENST00000469114 NKTRP30414 1462 aaKnown RBP30.59■■■□□ 2.49
UPK3B-204ENST00000469114 NOS1P29475 1434 aa30.59■■■□□ 2.49
UPK3B-204ENST00000469114 NWD1Q149M9 1564 aa30.58■■■□□ 2.49
UPK3B-204ENST00000469114 CHIC2Q9UKJ5 165 aa30.57■■■□□ 2.48
UPK3B-204ENST00000469114 POTEAQ6S8J7 498 aa30.54■■■□□ 2.48
UPK3B-204ENST00000469114 RBM33Q96EV2 1170 aaKnown RBP30.54■■■□□ 2.48
UPK3B-204ENST00000469114 SLC52A1Q9NWF4 448 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms