RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
TRAIP-202ENST00000469027 FAM135AQ9P2D6 1515 aa17.86■□□□□ 0.45
TRAIP-202ENST00000469027 PLXNC1O60486 1568 aa17.85■□□□□ 0.45
TRAIP-202ENST00000469027 ATP7AQ04656 1500 aa17.85■□□□□ 0.45
TRAIP-202ENST00000469027 UGGT1Q9NYU2 1555 aa17.83■□□□□ 0.45
TRAIP-202ENST00000469027 FAM135BQ49AJ0 1406 aa17.83■□□□□ 0.45
TRAIP-202ENST00000469027 SYCP2Q9BX26 1530 aa17.82■□□□□ 0.44
TRAIP-202ENST00000469027 FMN1Q68DA7 1419 aa17.82■□□□□ 0.44
TRAIP-202ENST00000469027 HNRNPMP52272 730 aaKnown RBP eCLIP17.8■□□□□ 0.44
TRAIP-202ENST00000469027 MEX3CQ5U5Q3 659 aaKnown RBP17.79■□□□□ 0.44
TRAIP-202ENST00000469027 ROBO1Q9Y6N7 1651 aa17.77■□□□□ 0.44
TRAIP-202ENST00000469027 NLRP1Q9C000 1473 aa17.77■□□□□ 0.44
TRAIP-202ENST00000469027 ZNF772Q68DY9 489 aaPredicted RBP17.77■□□□□ 0.44
TRAIP-202ENST00000469027 PZPP20742 1482 aa17.76■□□□□ 0.43
TRAIP-202ENST00000469027 CDC42BPAQ5VT25 1732 aa17.76■□□□□ 0.43
TRAIP-202ENST00000469027 INO80Q9ULG1 1556 aaPredicted RBP17.76■□□□□ 0.43
TRAIP-202ENST00000469027 XIRP1Q702N8 1843 aaKnown RBP17.75■□□□□ 0.43
TRAIP-202ENST00000469027 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
TRAIP-202ENST00000469027 JCADQ9P266 1359 aa17.74■□□□□ 0.43
TRAIP-202ENST00000469027 ADGBQ8N7X0 1667 aa17.73■□□□□ 0.43
TRAIP-202ENST00000469027 RXRBP28702 533 aa17.72■□□□□ 0.43
TRAIP-202ENST00000469027 CHIC1Q5VXU3 224 aa17.72■□□□□ 0.43
TRAIP-202ENST00000469027 LRRIQ1Q96JM4 1722 aa17.71■□□□□ 0.43
TRAIP-202ENST00000469027 KDM5DQ9BY66 1539 aa17.7■□□□□ 0.42
TRAIP-202ENST00000469027 ZC3H13Q5T200 1668 aaKnown RBP17.7■□□□□ 0.42
TRAIP-202ENST00000469027 WASHC2CQ9Y4E1 1318 aa17.7■□□□□ 0.42
TRAIP-202ENST00000469027 PHLPP1O60346 1717 aa17.69■□□□□ 0.42
TRAIP-202ENST00000469027 KIF3BO15066 747 aa17.68■□□□□ 0.42
TRAIP-202ENST00000469027 TMEM94Q12767 1356 aa17.66■□□□□ 0.42
TRAIP-202ENST00000469027 LRRC9Q6ZRR7 1453 aa17.66■□□□□ 0.42
TRAIP-202ENST00000469027 LRP6O75581 1613 aa17.65■□□□□ 0.42
TRAIP-202ENST00000469027 PLEKHH2Q8IVE3 1493 aa17.65■□□□□ 0.42
TRAIP-202ENST00000469027 FOXD1Q16676 465 aa17.65■□□□□ 0.42
TRAIP-202ENST00000469027 ZRANB1Q9UGI0 708 aa17.65■□□□□ 0.42
TRAIP-202ENST00000469027 SCAF11Q99590 1463 aaKnown RBP17.64■□□□□ 0.41
TRAIP-202ENST00000469027 EHMT2Q96KQ7 1210 aa17.64■□□□□ 0.41
TRAIP-202ENST00000469027 KIAA1107Q9UPP5 1409 aa17.64■□□□□ 0.41
TRAIP-202ENST00000469027 CFDP1Q9UEE9 299 aaPredicted RBP17.63■□□□□ 0.41
TRAIP-202ENST00000469027 CDK12Q9NYV4 1490 aaPredicted RBP17.63■□□□□ 0.41
TRAIP-202ENST00000469027 RBM33Q96EV2 1170 aaKnown RBP17.62■□□□□ 0.41
TRAIP-202ENST00000469027 SPATA31A6Q5VVP1 1343 aa17.62■□□□□ 0.41
TRAIP-202ENST00000469027 DHX29Q7Z478 1369 aaKnown RBP17.62■□□□□ 0.41
TRAIP-202ENST00000469027 ARHGAP35Q9NRY4 1499 aa17.62■□□□□ 0.41
TRAIP-202ENST00000469027 NUTM2BA6NNL0 878 aaPredicted RBP17.61■□□□□ 0.41
TRAIP-202ENST00000469027 NUTM2EB1AL46 878 aaPredicted RBP17.61■□□□□ 0.41
TRAIP-202ENST00000469027 NUTM2DQ5VT03 806 aaPredicted RBP17.61■□□□□ 0.41
TRAIP-202ENST00000469027 PROSER2Q86WR7 435 aaPredicted RBP17.61■□□□□ 0.41
TRAIP-202ENST00000469027 NUTM2AQ8IVF1 878 aaPredicted RBP17.61■□□□□ 0.41
TRAIP-202ENST00000469027 CCDC18Q5T9S5 1454 aa17.61■□□□□ 0.41
TRAIP-202ENST00000469027 GPATCH8Q9UKJ3 1502 aaKnown RBP17.61■□□□□ 0.41
TRAIP-202ENST00000469027 TXNDC2Q86VQ3 553 aa17.6■□□□□ 0.41
TRAIP-202ENST00000469027 EEA1Q15075 1411 aa17.59■□□□□ 0.41
TRAIP-202ENST00000469027 UBTFP17480 764 aaKnown RBP17.58■□□□□ 0.4
TRAIP-202ENST00000469027 LTKP29376 864 aa17.57■□□□□ 0.4
TRAIP-202ENST00000469027 SLAIN2Q9P270 581 aa17.57■□□□□ 0.4
TRAIP-202ENST00000469027 EID1Q9Y6B2 187 aa17.57■□□□□ 0.4
TRAIP-202ENST00000469027 SETBP1Q9Y6X0 1596 aa17.57■□□□□ 0.4
TRAIP-202ENST00000469027 MAP3K1Q13233 1512 aa17.57■□□□□ 0.4
TRAIP-202ENST00000469027 MSH6P52701 1360 aa17.56■□□□□ 0.4
TRAIP-202ENST00000469027 COL16A1Q07092 1604 aaPredicted RBP17.56■□□□□ 0.4
TRAIP-202ENST00000469027 FGD6Q6ZV73 1430 aa17.55■□□□□ 0.4
TRAIP-202ENST00000469027 UBR1Q8IWV7 1749 aa17.54■□□□□ 0.4
TRAIP-202ENST00000469027 RGS12O14924 1447 aa17.54■□□□□ 0.4
TRAIP-202ENST00000469027 CCNB3Q8WWL7 1395 aa17.53■□□□□ 0.4
TRAIP-202ENST00000469027 AFF2P51816 1311 aa17.53■□□□□ 0.4
TRAIP-202ENST00000469027 KCNA6P17658 529 aa17.52■□□□□ 0.4
TRAIP-202ENST00000469027 RTEL1-TNFRSF6BF6WH68 1400 aa17.52■□□□□ 0.4
TRAIP-202ENST00000469027 ERVK-7P63135 1459 aa17.51■□□□□ 0.39
TRAIP-202ENST00000469027 TIAM1Q13009 1591 aa17.49■□□□□ 0.39
TRAIP-202ENST00000469027 ATAD2Q6PL18 1390 aa17.49■□□□□ 0.39
TRAIP-202ENST00000469027 NCOA2Q15596 1464 aa17.49■□□□□ 0.39
TRAIP-202ENST00000469027 ARHGAP23Q9P227 1491 aa17.49■□□□□ 0.39
TRAIP-202ENST00000469027 ZNF644Q9H582 1327 aaPredicted RBP17.48■□□□□ 0.39
TRAIP-202ENST00000469027 CASKIN1Q8WXD9 1431 aa17.48■□□□□ 0.39
TRAIP-202ENST00000469027 SLIT1O75093 1534 aa17.48■□□□□ 0.39
TRAIP-202ENST00000469027 PRDM15P57071 1507 aaPredicted RBP17.48■□□□□ 0.39
TRAIP-202ENST00000469027 CFAP65Q6ZU64 1925 aaKnown RBP17.48■□□□□ 0.39
TRAIP-202ENST00000469027 SHPRHQ149N8 1683 aa17.48■□□□□ 0.39
TRAIP-202ENST00000469027 RBM6P78332 1123 aaKnown RBP17.47■□□□□ 0.39
TRAIP-202ENST00000469027 SLC26A8Q96RN1 970 aa17.46■□□□□ 0.39
TRAIP-202ENST00000469027 QTRT2Q9H974 415 aaKnown RBP17.46■□□□□ 0.39
TRAIP-202ENST00000469027 NKTRP30414 1462 aaKnown RBP17.44■□□□□ 0.38
TRAIP-202ENST00000469027 STAG3Q9UJ98 1225 aa17.44■□□□□ 0.38
TRAIP-202ENST00000469027 MBD5Q9P267 1494 aa17.44■□□□□ 0.38
TRAIP-202ENST00000469027 ABCC3O15438 1527 aa17.43■□□□□ 0.38
TRAIP-202ENST00000469027 BCANQ96GW7 911 aa17.42■□□□□ 0.38
TRAIP-202ENST00000469027 C8orf37Q96NL8 207 aa17.42■□□□□ 0.38
TRAIP-202ENST00000469027 C14orf37Q86TY3 774 aa17.41■□□□□ 0.38
TRAIP-202ENST00000469027 NGLY1Q96IV0 654 aa17.4■□□□□ 0.38
TRAIP-202ENST00000469027 TMEM2Q9UHN6 1383 aa17.4■□□□□ 0.38
TRAIP-202ENST00000469027 AHDC1Q5TGY3 1603 aaPredicted RBP17.39■□□□□ 0.37
TRAIP-202ENST00000469027 KDM5AP29375 1690 aaKnown RBP17.39■□□□□ 0.37
TRAIP-202ENST00000469027 CCDC141Q6ZP82 1450 aa17.37■□□□□ 0.37
TRAIP-202ENST00000469027 NWD1Q149M9 1564 aa17.37■□□□□ 0.37
TRAIP-202ENST00000469027 FYCO1Q9BQS8 1478 aa17.37■□□□□ 0.37
TRAIP-202ENST00000469027 MTUS2Q5JR59 1369 aa17.36■□□□□ 0.37
TRAIP-202ENST00000469027 CEP152O94986 1710 aa17.35■□□□□ 0.37
TRAIP-202ENST00000469027 PIK3C2BO00750 1634 aa17.34■□□□□ 0.37
TRAIP-202ENST00000469027 ATF3P18847 181 aa17.32■□□□□ 0.36
TRAIP-202ENST00000469027 CCDC125Q86Z20 511 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms