RNA–Protein interactions for RNA: ENST00000468922.1

SYN3-210, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-210ENST00000468922 ANKLE2Q86XL3 938 aa13.36□□□□□ -0.27
SYN3-210ENST00000468922 ZNF142P52746 1687 aaPredicted RBP13.36□□□□□ -0.27
SYN3-210ENST00000468922 A2ML1A8K2U0 1454 aa13.36□□□□□ -0.27
SYN3-210ENST00000468922 KANK4Q5T7N3 995 aaPredicted RBP13.35□□□□□ -0.27
SYN3-210ENST00000468922 RGS17Q9UGC6 210 aaPredicted RBP13.35□□□□□ -0.27
SYN3-210ENST00000468922 A2MP01023 1474 aa13.33□□□□□ -0.28
SYN3-210ENST00000468922 MBD5Q9P267 1494 aa13.33□□□□□ -0.28
SYN3-210ENST00000468922 CLTCQ00610 1675 aaKnown RBP13.33□□□□□ -0.28
SYN3-210ENST00000468922 ZNF644Q9H582 1327 aaPredicted RBP13.33□□□□□ -0.28
SYN3-210ENST00000468922 THEMISQ8N1K5 641 aaPredicted RBP13.32□□□□□ -0.28
SYN3-210ENST00000468922 DNMT1P26358 1616 aaKnown RBP13.31□□□□□ -0.28
SYN3-210ENST00000468922 FBXO31Q5XUX0 539 aaPredicted RBP13.3□□□□□ -0.28
SYN3-210ENST00000468922 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.3□□□□□ -0.28
SYN3-210ENST00000468922 INO80Q9ULG1 1556 aaPredicted RBP13.29□□□□□ -0.28
SYN3-210ENST00000468922 TNRQ92752 1358 aa13.29□□□□□ -0.28
SYN3-210ENST00000468922 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
SYN3-210ENST00000468922 APLP2Q06481 763 aa13.28□□□□□ -0.28
SYN3-210ENST00000468922 RSPH4AQ5TD94 716 aa13.28□□□□□ -0.28
SYN3-210ENST00000468922 CAMSAP2Q08AD1 1489 aa13.28□□□□□ -0.28
SYN3-210ENST00000468922 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
SYN3-210ENST00000468922 RTEL1-TNFRSF6BF6WH68 1400 aa13.27□□□□□ -0.29
SYN3-210ENST00000468922 NPHP4O75161 1426 aaPredicted RBP13.27□□□□□ -0.29
SYN3-210ENST00000468922 MIA2Q96PC5 1412 aa13.27□□□□□ -0.29
SYN3-210ENST00000468922 VWDEQ8N2E2 1590 aa13.27□□□□□ -0.29
SYN3-210ENST00000468922 NEURL4Q96JN8 1562 aa13.27□□□□□ -0.29
SYN3-210ENST00000468922 PLXNC1O60486 1568 aa13.26□□□□□ -0.29
SYN3-210ENST00000468922 ARHGEF5Q12774 1597 aa13.26□□□□□ -0.29
SYN3-210ENST00000468922 MYOM3Q5VTT5 1437 aa13.26□□□□□ -0.29
SYN3-210ENST00000468922 POTEAQ6S8J7 498 aa13.26□□□□□ -0.29
SYN3-210ENST00000468922 CCDC141Q6ZP82 1450 aa13.25□□□□□ -0.29
SYN3-210ENST00000468922 LRRC7Q96NW7 1537 aa13.23□□□□□ -0.29
SYN3-210ENST00000468922 MED14O60244 1454 aa13.23□□□□□ -0.29
SYN3-210ENST00000468922 POLR1AO95602 1720 aaPredicted RBP13.22□□□□□ -0.29
SYN3-210ENST00000468922 ADGBQ8N7X0 1667 aa13.22□□□□□ -0.29
SYN3-210ENST00000468922 WASHC2CQ9Y4E1 1318 aa13.22□□□□□ -0.29
SYN3-210ENST00000468922 KIF3BO15066 747 aa13.22□□□□□ -0.29
SYN3-210ENST00000468922 FAM135AQ9P2D6 1515 aa13.22□□□□□ -0.29
SYN3-210ENST00000468922 DHX29Q7Z478 1369 aaKnown RBP13.2□□□□□ -0.3
SYN3-210ENST00000468922 PZPP20742 1482 aa13.2□□□□□ -0.3
SYN3-210ENST00000468922 MAST1Q9Y2H9 1570 aa13.2□□□□□ -0.3
SYN3-210ENST00000468922 NLRP1Q9C000 1473 aa13.19□□□□□ -0.3
SYN3-210ENST00000468922 UGGT1Q9NYU2 1555 aa13.19□□□□□ -0.3
SYN3-210ENST00000468922 TSPY4P0CV99 314 aa13.18□□□□□ -0.3
SYN3-210ENST00000468922 TSPY10P0CW01 314 aa13.18□□□□□ -0.3
SYN3-210ENST00000468922 FGD6Q6ZV73 1430 aa13.18□□□□□ -0.3
SYN3-210ENST00000468922 DEPDC5O75140 1603 aa13.17□□□□□ -0.3
SYN3-210ENST00000468922 RNF17Q9BXT8 1623 aaKnown RBP13.17□□□□□ -0.3
SYN3-210ENST00000468922 PTPN23Q9H3S7 1636 aa13.17□□□□□ -0.3
SYN3-210ENST00000468922 FAM135BQ49AJ0 1406 aa13.15□□□□□ -0.3
SYN3-210ENST00000468922 ABCC5O15440 1437 aa13.14□□□□□ -0.31
SYN3-210ENST00000468922 KDM5DQ9BY66 1539 aa13.14□□□□□ -0.31
SYN3-210ENST00000468922 IQGAP1P46940 1657 aa13.14□□□□□ -0.31
SYN3-210ENST00000468922 SYNMO15061 1565 aa13.13□□□□□ -0.31
SYN3-210ENST00000468922 UPF1Q92900 1129 aaKnown RBP eCLIP13.12□□□□□ -0.31
SYN3-210ENST00000468922 DAPK1P53355 1430 aa13.12□□□□□ -0.31
SYN3-210ENST00000468922 CROCC2H7BZ55 1655 aa13.12□□□□□ -0.31
SYN3-210ENST00000468922 TXNDC2Q86VQ3 553 aa13.11□□□□□ -0.31
SYN3-210ENST00000468922 STRCP1A6NGW2 1772 aa13.11□□□□□ -0.31
SYN3-210ENST00000468922 LTKP29376 864 aa13.09□□□□□ -0.31
SYN3-210ENST00000468922 EIF2AK4Q9P2K8 1649 aaKnown RBP13.09□□□□□ -0.31
SYN3-210ENST00000468922 DUOX2Q9NRD8 1548 aa13.08□□□□□ -0.31
SYN3-210ENST00000468922 EID1Q9Y6B2 187 aa13.08□□□□□ -0.32
SYN3-210ENST00000468922 SCAF11Q99590 1463 aaKnown RBP13.07□□□□□ -0.32
SYN3-210ENST00000468922 KIF15Q9NS87 1388 aa13.07□□□□□ -0.32
SYN3-210ENST00000468922 TRIM52Q96A61 297 aa13.06□□□□□ -0.32
SYN3-210ENST00000468922 TMEM94Q12767 1356 aa13.06□□□□□ -0.32
SYN3-210ENST00000468922 ADGRL2O95490 1459 aa13.05□□□□□ -0.32
SYN3-210ENST00000468922 PROSER2Q86WR7 435 aaPredicted RBP13.05□□□□□ -0.32
SYN3-210ENST00000468922 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
SYN3-210ENST00000468922 MROH1Q8NDA8 1641 aa13.04□□□□□ -0.32
SYN3-210ENST00000468922 ZNF772Q68DY9 489 aaPredicted RBP13.04□□□□□ -0.32
SYN3-210ENST00000468922 ANKRD30AQ9BXX3 1397 aa13.04□□□□□ -0.32
SYN3-210ENST00000468922 JCADQ9P266 1359 aa13.04□□□□□ -0.32
SYN3-210ENST00000468922 SETD1AO15047 1707 aaKnown RBP13.03□□□□□ -0.32
SYN3-210ENST00000468922 KCNA6P17658 529 aa13.03□□□□□ -0.32
SYN3-210ENST00000468922 FAM50AQ14320 339 aaKnown RBP13.03□□□□□ -0.32
SYN3-210ENST00000468922 RRP7BPQ9NSQ0 103 aa13.03□□□□□ -0.32
SYN3-210ENST00000468922 ZC3H13Q5T200 1668 aaKnown RBP13.02□□□□□ -0.32
SYN3-210ENST00000468922 MEX3CQ5U5Q3 659 aaKnown RBP13.02□□□□□ -0.33
SYN3-210ENST00000468922 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.33
SYN3-210ENST00000468922 ERVK-7P63135 1459 aa13.02□□□□□ -0.33
SYN3-210ENST00000468922 SLAIN2Q9P270 581 aa13.01□□□□□ -0.33
SYN3-210ENST00000468922 CHIC2Q9UKJ5 165 aa13.01□□□□□ -0.33
SYN3-210ENST00000468922 ABCC3O15438 1527 aa13.01□□□□□ -0.33
SYN3-210ENST00000468922 PRDM15P57071 1507 aaPredicted RBP13□□□□□ -0.33
SYN3-210ENST00000468922 ARHGAP23Q9P227 1491 aa13□□□□□ -0.33
SYN3-210ENST00000468922 RXRBP28702 533 aa13□□□□□ -0.33
SYN3-210ENST00000468922 PPARGC1BQ86YN6 1023 aaKnown RBP13□□□□□ -0.33
SYN3-210ENST00000468922 STAG3Q9UJ98 1225 aa13□□□□□ -0.33
SYN3-210ENST00000468922 ROBO1Q9Y6N7 1651 aa12.99□□□□□ -0.33
SYN3-210ENST00000468922 SLIT1O75093 1534 aa12.98□□□□□ -0.33
SYN3-210ENST00000468922 MSH6P52701 1360 aa12.98□□□□□ -0.33
SYN3-210ENST00000468922 SPATA31A6Q5VVP1 1343 aa12.98□□□□□ -0.33
SYN3-210ENST00000468922 SLC26A8Q96RN1 970 aa12.98□□□□□ -0.33
SYN3-210ENST00000468922 RRBP1Q9P2E9 1410 aaKnown RBP12.97□□□□□ -0.33
SYN3-210ENST00000468922 XIRP1Q702N8 1843 aaKnown RBP12.97□□□□□ -0.33
SYN3-210ENST00000468922 ROCK1Q13464 1354 aa12.97□□□□□ -0.33
SYN3-210ENST00000468922 TMEM2Q9UHN6 1383 aa12.96□□□□□ -0.33
SYN3-210ENST00000468922 CEP152O94986 1710 aa12.96□□□□□ -0.34
SYN3-210ENST00000468922 UBR1Q8IWV7 1749 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms