RNA–Protein interactions for RNA: ENST00000468518.1

LAMB1-206, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-206ENST00000468518 GPATCH8Q9UKJ3 1502 aaKnown RBP20.27■□□□□ 0.84
LAMB1-206ENST00000468518 NPATQ14207 1427 aa20.27■□□□□ 0.83
LAMB1-206ENST00000468518 ADGBQ8N7X0 1667 aa20.26■□□□□ 0.83
LAMB1-206ENST00000468518 CEP170BQ9Y4F5 1589 aaPredicted RBP20.26■□□□□ 0.83
LAMB1-206ENST00000468518 ADGRL2O95490 1459 aa20.26■□□□□ 0.83
LAMB1-206ENST00000468518 ZNF316A6NFI3 1004 aaPredicted RBP20.26■□□□□ 0.83
LAMB1-206ENST00000468518 SETD1AO15047 1707 aaKnown RBP20.26■□□□□ 0.83
LAMB1-206ENST00000468518 POLR1AO95602 1720 aaPredicted RBP20.25■□□□□ 0.83
LAMB1-206ENST00000468518 CDC42BPAQ5VT25 1732 aa20.25■□□□□ 0.83
LAMB1-206ENST00000468518 SHANK2Q9UPX8 1470 aa20.24■□□□□ 0.83
LAMB1-206ENST00000468518 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
LAMB1-206ENST00000468518 CPS1P31327 1500 aa20.23■□□□□ 0.83
LAMB1-206ENST00000468518 CNTLNQ9NXG0 1405 aa20.23■□□□□ 0.83
LAMB1-206ENST00000468518 RGS17Q9UGC6 210 aaPredicted RBP20.23■□□□□ 0.83
LAMB1-206ENST00000468518 ABCC5O15440 1437 aa20.22■□□□□ 0.83
LAMB1-206ENST00000468518 TOM1O60784 492 aa20.21■□□□□ 0.83
LAMB1-206ENST00000468518 PREX2Q70Z35 1606 aa20.2■□□□□ 0.82
LAMB1-206ENST00000468518 CLTCQ00610 1675 aaKnown RBP20.19■□□□□ 0.82
LAMB1-206ENST00000468518 PKD2Q13563 968 aa20.19■□□□□ 0.82
LAMB1-206ENST00000468518 ARHGEF5Q12774 1597 aa20.19■□□□□ 0.82
LAMB1-206ENST00000468518 NEURL4Q96JN8 1562 aa20.18■□□□□ 0.82
LAMB1-206ENST00000468518 ESF1Q9H501 851 aaKnown RBP20.18■□□□□ 0.82
LAMB1-206ENST00000468518 KIDINS220Q9ULH0 1771 aa20.18■□□□□ 0.82
LAMB1-206ENST00000468518 AFAP1Q8N556 730 aa20.17■□□□□ 0.82
LAMB1-206ENST00000468518 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
LAMB1-206ENST00000468518 MLH3Q9UHC1 1453 aa20.16■□□□□ 0.82
LAMB1-206ENST00000468518 CDC42BPBQ9Y5S2 1711 aa20.13■□□□□ 0.81
LAMB1-206ENST00000468518 ARHGAP5Q13017 1502 aa20.13■□□□□ 0.81
LAMB1-206ENST00000468518 VWDEQ8N2E2 1590 aa20.12■□□□□ 0.81
LAMB1-206ENST00000468518 EFCAB2Q5VUJ9 269 aa20.12■□□□□ 0.81
LAMB1-206ENST00000468518 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
LAMB1-206ENST00000468518 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
LAMB1-206ENST00000468518 MYT1LQ9UL68 1186 aa20.1■□□□□ 0.81
LAMB1-206ENST00000468518 ZMYM3Q14202 1370 aa20.09■□□□□ 0.81
LAMB1-206ENST00000468518 STRCP1A6NGW2 1772 aa20.09■□□□□ 0.81
LAMB1-206ENST00000468518 CFDP1Q9UEE9 299 aaPredicted RBP20.09■□□□□ 0.81
LAMB1-206ENST00000468518 RNF17Q9BXT8 1623 aaKnown RBP20.08■□□□□ 0.8
LAMB1-206ENST00000468518 MAST1Q9Y2H9 1570 aa20.08■□□□□ 0.8
LAMB1-206ENST00000468518 ABCC1P33527 1531 aa20.07■□□□□ 0.8
LAMB1-206ENST00000468518 PLEKHH2Q8IVE3 1493 aa20.05■□□□□ 0.8
LAMB1-206ENST00000468518 KDM5DQ9BY66 1539 aa20.04■□□□□ 0.8
LAMB1-206ENST00000468518 POTEAQ6S8J7 498 aa20.04■□□□□ 0.8
LAMB1-206ENST00000468518 SAMD9LQ8IVG5 1584 aa20.04■□□□□ 0.8
LAMB1-206ENST00000468518 MBD5Q9P267 1494 aa20.03■□□□□ 0.8
LAMB1-206ENST00000468518 ANKRD30AQ9BXX3 1397 aa20.02■□□□□ 0.8
LAMB1-206ENST00000468518 A2ML1A8K2U0 1454 aa20.02■□□□□ 0.8
LAMB1-206ENST00000468518 KIAA1107Q9UPP5 1409 aa20.02■□□□□ 0.79
LAMB1-206ENST00000468518 CCDC141Q6ZP82 1450 aa20■□□□□ 0.79
LAMB1-206ENST00000468518 ZNF644Q9H582 1327 aaPredicted RBP20■□□□□ 0.79
LAMB1-206ENST00000468518 SYNMO15061 1565 aa20■□□□□ 0.79
LAMB1-206ENST00000468518 RSPH4AQ5TD94 716 aa19.99■□□□□ 0.79
LAMB1-206ENST00000468518 RRP7BPQ9NSQ0 103 aa19.98■□□□□ 0.79
LAMB1-206ENST00000468518 PLXNC1O60486 1568 aa19.98■□□□□ 0.79
LAMB1-206ENST00000468518 SRCAPQ6ZRS2 3230 aa19.96■□□□□ 0.79
LAMB1-206ENST00000468518 PZPP20742 1482 aa19.95■□□□□ 0.78
LAMB1-206ENST00000468518 XIRP1Q702N8 1843 aaKnown RBP19.95■□□□□ 0.78
LAMB1-206ENST00000468518 TONSLQ96HA7 1378 aa19.95■□□□□ 0.78
LAMB1-206ENST00000468518 IQGAP1P46940 1657 aa19.94■□□□□ 0.78
LAMB1-206ENST00000468518 LRRC7Q96NW7 1537 aa19.94■□□□□ 0.78
LAMB1-206ENST00000468518 CHIC2Q9UKJ5 165 aa19.94■□□□□ 0.78
LAMB1-206ENST00000468518 PPP1R15AO75807 674 aaPredicted RBP19.93■□□□□ 0.78
LAMB1-206ENST00000468518 ANKRD50Q9ULJ7 1429 aa19.93■□□□□ 0.78
LAMB1-206ENST00000468518 RPRD2Q5VT52 1461 aaKnown RBP19.92■□□□□ 0.78
LAMB1-206ENST00000468518 DEPDC5O75140 1603 aa19.92■□□□□ 0.78
LAMB1-206ENST00000468518 SIN3AQ96ST3 1273 aa19.92■□□□□ 0.78
LAMB1-206ENST00000468518 ANKRD30BQ9BXX2 1392 aa19.91■□□□□ 0.78
LAMB1-206ENST00000468518 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
LAMB1-206ENST00000468518 SYCP2Q9BX26 1530 aa19.89■□□□□ 0.77
LAMB1-206ENST00000468518 UNC13BO14795 1591 aa19.87■□□□□ 0.77
LAMB1-206ENST00000468518 INO80Q9ULG1 1556 aaPredicted RBP19.87■□□□□ 0.77
LAMB1-206ENST00000468518 MED14O60244 1454 aa19.86■□□□□ 0.77
LAMB1-206ENST00000468518 NPHP4O75161 1426 aaPredicted RBP19.85■□□□□ 0.77
LAMB1-206ENST00000468518 ATP7AQ04656 1500 aa19.84■□□□□ 0.77
LAMB1-206ENST00000468518 ZC3H13Q5T200 1668 aaKnown RBP19.84■□□□□ 0.77
LAMB1-206ENST00000468518 KIF15Q9NS87 1388 aa19.83■□□□□ 0.77
LAMB1-206ENST00000468518 TSPY4P0CV99 314 aa19.82■□□□□ 0.76
LAMB1-206ENST00000468518 TSPY10P0CW01 314 aa19.82■□□□□ 0.76
LAMB1-206ENST00000468518 NEUROD1Q13562 356 aa19.82■□□□□ 0.76
LAMB1-206ENST00000468518 UPF1Q92900 1129 aaKnown RBP eCLIP19.82■□□□□ 0.76
LAMB1-206ENST00000468518 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
LAMB1-206ENST00000468518 A2MP01023 1474 aa19.8■□□□□ 0.76
LAMB1-206ENST00000468518 ZNF777Q9ULD5 760 aaPredicted RBP19.8■□□□□ 0.76
LAMB1-206ENST00000468518 DUOX2Q9NRD8 1548 aa19.8■□□□□ 0.76
LAMB1-206ENST00000468518 ROBO1Q9Y6N7 1651 aa19.78■□□□□ 0.76
LAMB1-206ENST00000468518 RTEL1-TNFRSF6BF6WH68 1400 aa19.78■□□□□ 0.76
LAMB1-206ENST00000468518 ERBINQ96RT1 1412 aa19.78■□□□□ 0.76
LAMB1-206ENST00000468518 TNRQ92752 1358 aa19.77■□□□□ 0.76
LAMB1-206ENST00000468518 IQGAP3Q86VI3 1631 aa19.76■□□□□ 0.75
LAMB1-206ENST00000468518 ANKLE2Q86XL3 938 aa19.76■□□□□ 0.75
LAMB1-206ENST00000468518 UGGT1Q9NYU2 1555 aa19.75■□□□□ 0.75
LAMB1-206ENST00000468518 GGT6Q6P531 493 aa19.74■□□□□ 0.75
LAMB1-206ENST00000468518 SLC4A1APQ9BWU0 796 aaKnown RBP19.74■□□□□ 0.75
LAMB1-206ENST00000468518 FAM135AQ9P2D6 1515 aa19.72■□□□□ 0.75
LAMB1-206ENST00000468518 SPAG9O60271 1321 aaKnown RBP19.72■□□□□ 0.75
LAMB1-206ENST00000468518 FAM135BQ49AJ0 1406 aa19.71■□□□□ 0.75
LAMB1-206ENST00000468518 HNRNPMP52272 730 aaKnown RBP eCLIP19.71■□□□□ 0.75
LAMB1-206ENST00000468518 FBXO31Q5XUX0 539 aaPredicted RBP19.7■□□□□ 0.74
LAMB1-206ENST00000468518 PHLPP1O60346 1717 aa19.68■□□□□ 0.74
LAMB1-206ENST00000468518 NLRP1Q9C000 1473 aa19.68■□□□□ 0.74
LAMB1-206ENST00000468518 EIF2AK4Q9P2K8 1649 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms