RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 CAMSAP2Q08AD1 1489 aa21.01■□□□□ 0.95
PTPN7-207ENST00000468385 UBAP1LF5GYI3 381 aa21.01■□□□□ 0.95
PTPN7-207ENST00000468385 KIF3BO15066 747 aa21.01■□□□□ 0.95
PTPN7-207ENST00000468385 FBXO31Q5XUX0 539 aaPredicted RBP21■□□□□ 0.95
PTPN7-207ENST00000468385 RSPH4AQ5TD94 716 aa20.99■□□□□ 0.95
PTPN7-207ENST00000468385 PZPP20742 1482 aa20.99■□□□□ 0.95
PTPN7-207ENST00000468385 KDM5DQ9BY66 1539 aa20.99■□□□□ 0.95
PTPN7-207ENST00000468385 FAM135AQ9P2D6 1515 aa20.99■□□□□ 0.95
PTPN7-207ENST00000468385 TNRQ92752 1358 aa20.98■□□□□ 0.95
PTPN7-207ENST00000468385 NEURL4Q96JN8 1562 aa20.96■□□□□ 0.95
PTPN7-207ENST00000468385 WASHC2CQ9Y4E1 1318 aa20.95■□□□□ 0.94
PTPN7-207ENST00000468385 ARHGEF5Q12774 1597 aa20.94■□□□□ 0.94
PTPN7-207ENST00000468385 POLR1AO95602 1720 aaPredicted RBP20.93■□□□□ 0.94
PTPN7-207ENST00000468385 MIA2Q96PC5 1412 aa20.91■□□□□ 0.94
PTPN7-207ENST00000468385 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.9■□□□□ 0.94
PTPN7-207ENST00000468385 TSPY4P0CV99 314 aa20.9■□□□□ 0.94
PTPN7-207ENST00000468385 TSPY10P0CW01 314 aa20.9■□□□□ 0.94
PTPN7-207ENST00000468385 CPS1P31327 1500 aa20.89■□□□□ 0.94
PTPN7-207ENST00000468385 NLRP1Q9C000 1473 aa20.88■□□□□ 0.93
PTPN7-207ENST00000468385 SHANK2Q9UPX8 1470 aa20.88■□□□□ 0.93
PTPN7-207ENST00000468385 LRRC9Q6ZRR7 1453 aa20.88■□□□□ 0.93
PTPN7-207ENST00000468385 ANKLE2Q86XL3 938 aa20.87■□□□□ 0.93
PTPN7-207ENST00000468385 THEMISQ8N1K5 641 aaPredicted RBP20.87■□□□□ 0.93
PTPN7-207ENST00000468385 UGGT1Q9NYU2 1555 aa20.86■□□□□ 0.93
PTPN7-207ENST00000468385 RNF17Q9BXT8 1623 aaKnown RBP20.86■□□□□ 0.93
PTPN7-207ENST00000468385 MAST1Q9Y2H9 1570 aa20.85■□□□□ 0.93
PTPN7-207ENST00000468385 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
PTPN7-207ENST00000468385 VWDEQ8N2E2 1590 aa20.85■□□□□ 0.93
PTPN7-207ENST00000468385 MED14O60244 1454 aa20.84■□□□□ 0.93
PTPN7-207ENST00000468385 ABCC3O15438 1527 aa20.83■□□□□ 0.93
PTPN7-207ENST00000468385 DEPDC5O75140 1603 aa20.83■□□□□ 0.93
PTPN7-207ENST00000468385 NPHP4O75161 1426 aaPredicted RBP20.83■□□□□ 0.93
PTPN7-207ENST00000468385 TOM1O60784 492 aa20.82■□□□□ 0.92
PTPN7-207ENST00000468385 HSPA1LP34931 641 aa20.82■□□□□ 0.92
PTPN7-207ENST00000468385 PIP4K2BP78356 416 aa20.81■□□□□ 0.92
PTPN7-207ENST00000468385 SCAF1Q9H7N4 1312 aaKnown RBP20.8■□□□□ 0.92
PTPN7-207ENST00000468385 ZC3H13Q5T200 1668 aaKnown RBP20.8■□□□□ 0.92
PTPN7-207ENST00000468385 KANK4Q5T7N3 995 aaPredicted RBP20.8■□□□□ 0.92
PTPN7-207ENST00000468385 MROH1Q8NDA8 1641 aa20.79■□□□□ 0.92
PTPN7-207ENST00000468385 EIF2AK4Q9P2K8 1649 aaKnown RBP20.79■□□□□ 0.92
PTPN7-207ENST00000468385 ERVK-7P63135 1459 aa20.78■□□□□ 0.92
PTPN7-207ENST00000468385 MAP3K1Q13233 1512 aa20.77■□□□□ 0.92
PTPN7-207ENST00000468385 IQGAP1P46940 1657 aa20.77■□□□□ 0.91
PTPN7-207ENST00000468385 ALKQ9UM73 1620 aa20.76■□□□□ 0.91
PTPN7-207ENST00000468385 LOC105371045A0A1W2PR82 267 aa20.76■□□□□ 0.91
PTPN7-207ENST00000468385 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
PTPN7-207ENST00000468385 MYOM3Q5VTT5 1437 aa20.76■□□□□ 0.91
PTPN7-207ENST00000468385 MED1Q15648 1581 aaPredicted RBP20.74■□□□□ 0.91
PTPN7-207ENST00000468385 DUOX2Q9NRD8 1548 aa20.73■□□□□ 0.91
PTPN7-207ENST00000468385 CEP152O94986 1710 aa20.73■□□□□ 0.91
PTPN7-207ENST00000468385 STRCP1A6NGW2 1772 aa20.72■□□□□ 0.91
PTPN7-207ENST00000468385 LRRC7Q96NW7 1537 aa20.71■□□□□ 0.91
PTPN7-207ENST00000468385 UBR1Q8IWV7 1749 aa20.7■□□□□ 0.9
PTPN7-207ENST00000468385 SYNMO15061 1565 aa20.68■□□□□ 0.9
PTPN7-207ENST00000468385 KIF15Q9NS87 1388 aa20.67■□□□□ 0.9
PTPN7-207ENST00000468385 ARHGAP31Q2M1Z3 1444 aa20.67■□□□□ 0.9
PTPN7-207ENST00000468385 PRDM15P57071 1507 aaPredicted RBP20.67■□□□□ 0.9
PTPN7-207ENST00000468385 ABCC5O15440 1437 aa20.66■□□□□ 0.9
PTPN7-207ENST00000468385 SCAF11Q99590 1463 aaKnown RBP20.66■□□□□ 0.9
PTPN7-207ENST00000468385 ARHGAP23Q9P227 1491 aa20.66■□□□□ 0.9
PTPN7-207ENST00000468385 CFAP65Q6ZU64 1925 aaKnown RBP20.66■□□□□ 0.9
PTPN7-207ENST00000468385 SLIT1O75093 1534 aa20.65■□□□□ 0.9
PTPN7-207ENST00000468385 ERBINQ96RT1 1412 aa20.65■□□□□ 0.9
PTPN7-207ENST00000468385 LTKP29376 864 aa20.65■□□□□ 0.9
PTPN7-207ENST00000468385 CROCC2H7BZ55 1655 aa20.64■□□□□ 0.89
PTPN7-207ENST00000468385 RRP7BPQ9NSQ0 103 aa20.63■□□□□ 0.89
PTPN7-207ENST00000468385 TXNDC2Q86VQ3 553 aa20.62■□□□□ 0.89
PTPN7-207ENST00000468385 PTPN23Q9H3S7 1636 aa20.62■□□□□ 0.89
PTPN7-207ENST00000468385 DAPK1P53355 1430 aa20.6■□□□□ 0.89
PTPN7-207ENST00000468385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.59■□□□□ 0.89
PTPN7-207ENST00000468385 PIK3C2BO00750 1634 aa20.58■□□□□ 0.89
PTPN7-207ENST00000468385 SENP3Q9H4L4 574 aaPredicted RBP20.58■□□□□ 0.89
PTPN7-207ENST00000468385 EID1Q9Y6B2 187 aa20.56■□□□□ 0.88
PTPN7-207ENST00000468385 TMEM2Q9UHN6 1383 aa20.56■□□□□ 0.88
PTPN7-207ENST00000468385 FGD6Q6ZV73 1430 aa20.55■□□□□ 0.88
PTPN7-207ENST00000468385 LMTK2Q8IWU2 1503 aa20.55■□□□□ 0.88
PTPN7-207ENST00000468385 KANK1Q14678 1352 aa20.55■□□□□ 0.88
PTPN7-207ENST00000468385 XIRP1Q702N8 1843 aaKnown RBP20.54■□□□□ 0.88
PTPN7-207ENST00000468385 APLP2Q06481 763 aa20.52■□□□□ 0.88
PTPN7-207ENST00000468385 IDI1Q13907 227 aa20.52■□□□□ 0.88
PTPN7-207ENST00000468385 CHIC2Q9UKJ5 165 aa20.52■□□□□ 0.88
PTPN7-207ENST00000468385 EFCAB6Q5THR3 1501 aa20.52■□□□□ 0.87
PTPN7-207ENST00000468385 ANKRD30AQ9BXX3 1397 aa20.51■□□□□ 0.87
PTPN7-207ENST00000468385 STAG3Q9UJ98 1225 aa20.51■□□□□ 0.87
PTPN7-207ENST00000468385 KDM5AP29375 1690 aaKnown RBP20.51■□□□□ 0.87
PTPN7-207ENST00000468385 NOS1P29475 1434 aa20.48■□□□□ 0.87
PTPN7-207ENST00000468385 TET3O43151 1660 aa20.47■□□□□ 0.87
PTPN7-207ENST00000468385 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
PTPN7-207ENST00000468385 FAM135BQ49AJ0 1406 aa20.46■□□□□ 0.87
PTPN7-207ENST00000468385 KCNA6P17658 529 aa20.46■□□□□ 0.87
PTPN7-207ENST00000468385 ADGRL2O95490 1459 aa20.44■□□□□ 0.86
PTPN7-207ENST00000468385 ADGRB3O60242 1522 aa20.44■□□□□ 0.86
PTPN7-207ENST00000468385 SLC26A8Q96RN1 970 aa20.44■□□□□ 0.86
PTPN7-207ENST00000468385 RGS17Q9UGC6 210 aaPredicted RBP20.44■□□□□ 0.86
PTPN7-207ENST00000468385 SLC52A1Q9NWF4 448 aa20.42■□□□□ 0.86
PTPN7-207ENST00000468385 NWD1Q149M9 1564 aa20.4■□□□□ 0.86
PTPN7-207ENST00000468385 RBM33Q96EV2 1170 aaKnown RBP20.4■□□□□ 0.86
PTPN7-207ENST00000468385 PROSER2Q86WR7 435 aaPredicted RBP20.39■□□□□ 0.85
PTPN7-207ENST00000468385 NKTRP30414 1462 aaKnown RBP20.38■□□□□ 0.85
PTPN7-207ENST00000468385 RPRD2Q5VT52 1461 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms