RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 DHX29Q7Z478 1369 aaKnown RBP17.4■□□□□ 0.38
COL4A6-205ENST00000468338 MAST1Q9Y2H9 1570 aa17.38■□□□□ 0.37
COL4A6-205ENST00000468338 TSPY4P0CV99 314 aa17.38■□□□□ 0.37
COL4A6-205ENST00000468338 TSPY10P0CW01 314 aa17.38■□□□□ 0.37
COL4A6-205ENST00000468338 FGD6Q6ZV73 1430 aa17.38■□□□□ 0.37
COL4A6-205ENST00000468338 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
COL4A6-205ENST00000468338 SETD1BQ9UPS6 1966 aaKnown RBP17.37■□□□□ 0.37
COL4A6-205ENST00000468338 PTPN23Q9H3S7 1636 aa17.36■□□□□ 0.37
COL4A6-205ENST00000468338 CNTLNQ9NXG0 1405 aa17.36■□□□□ 0.37
COL4A6-205ENST00000468338 ATF5Q9Y2D1 282 aaPredicted RBP17.35■□□□□ 0.37
COL4A6-205ENST00000468338 LMTK3Q96Q04 1460 aa17.35■□□□□ 0.37
COL4A6-205ENST00000468338 CEBPAP49715 358 aaPredicted RBP17.34■□□□□ 0.37
COL4A6-205ENST00000468338 ABCC5O15440 1437 aa17.33■□□□□ 0.36
COL4A6-205ENST00000468338 C3P01024 1663 aa17.32■□□□□ 0.36
COL4A6-205ENST00000468338 SHANK2Q9UPX8 1470 aa17.31■□□□□ 0.36
COL4A6-205ENST00000468338 MROH2AA6NES4 1674 aa17.31■□□□□ 0.36
COL4A6-205ENST00000468338 ESF1Q9H501 851 aaKnown RBP17.3■□□□□ 0.36
COL4A6-205ENST00000468338 ZMYM3Q14202 1370 aa17.29■□□□□ 0.36
COL4A6-205ENST00000468338 DNMT1P26358 1616 aaKnown RBP17.29■□□□□ 0.36
COL4A6-205ENST00000468338 GGT6Q6P531 493 aa17.29■□□□□ 0.36
COL4A6-205ENST00000468338 CROCC2H7BZ55 1655 aa17.29■□□□□ 0.36
COL4A6-205ENST00000468338 DAPK1P53355 1430 aa17.29■□□□□ 0.36
COL4A6-205ENST00000468338 KIF3BO15066 747 aa17.28■□□□□ 0.36
COL4A6-205ENST00000468338 U3KPZ7 1027 aaPredicted RBP17.27■□□□□ 0.36
COL4A6-205ENST00000468338 FAM135AQ9P2D6 1515 aa17.26■□□□□ 0.35
COL4A6-205ENST00000468338 CLTCQ00610 1675 aaKnown RBP17.26■□□□□ 0.35
COL4A6-205ENST00000468338 PREX1Q8TCU6 1659 aa17.26■□□□□ 0.35
COL4A6-205ENST00000468338 NPATQ14207 1427 aa17.25■□□□□ 0.35
COL4A6-205ENST00000468338 DUOX2Q9NRD8 1548 aa17.24■□□□□ 0.35
COL4A6-205ENST00000468338 EIF2AK4Q9P2K8 1649 aaKnown RBP17.24■□□□□ 0.35
COL4A6-205ENST00000468338 RNF17Q9BXT8 1623 aaKnown RBP17.23■□□□□ 0.35
COL4A6-205ENST00000468338 PTPRKQ15262 1439 aa17.22■□□□□ 0.35
COL4A6-205ENST00000468338 HSPA2P54652 639 aa17.22■□□□□ 0.35
COL4A6-205ENST00000468338 KIF15Q9NS87 1388 aa17.22■□□□□ 0.35
COL4A6-205ENST00000468338 NCOA1Q15788 1441 aa17.21■□□□□ 0.35
COL4A6-205ENST00000468338 KDM5DQ9BY66 1539 aa17.21■□□□□ 0.34
COL4A6-205ENST00000468338 UHRF1BP1Q6BDS2 1440 aa17.21■□□□□ 0.34
COL4A6-205ENST00000468338 ADGRL2O95490 1459 aa17.2■□□□□ 0.34
COL4A6-205ENST00000468338 ERBINQ96RT1 1412 aa17.2■□□□□ 0.34
COL4A6-205ENST00000468338 ANKRD30AQ9BXX3 1397 aa17.19■□□□□ 0.34
COL4A6-205ENST00000468338 MROH1Q8NDA8 1641 aa17.19■□□□□ 0.34
COL4A6-205ENST00000468338 FAM50AQ14320 339 aaKnown RBP17.19■□□□□ 0.34
COL4A6-205ENST00000468338 RRP7BPQ9NSQ0 103 aa17.19■□□□□ 0.34
COL4A6-205ENST00000468338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.18■□□□□ 0.34
COL4A6-205ENST00000468338 WASHC2CQ9Y4E1 1318 aa17.18■□□□□ 0.34
COL4A6-205ENST00000468338 PPARGC1BQ86YN6 1023 aaKnown RBP17.16■□□□□ 0.34
COL4A6-205ENST00000468338 CHIC2Q9UKJ5 165 aa17.16■□□□□ 0.34
COL4A6-205ENST00000468338 PZPP20742 1482 aa17.16■□□□□ 0.34
COL4A6-205ENST00000468338 ABCC3O15438 1527 aa17.16■□□□□ 0.34
COL4A6-205ENST00000468338 ZC3H13Q5T200 1668 aaKnown RBP17.14■□□□□ 0.33
COL4A6-205ENST00000468338 PRDM15P57071 1507 aaPredicted RBP17.14■□□□□ 0.33
COL4A6-205ENST00000468338 DEPDC5O75140 1603 aa17.14■□□□□ 0.33
COL4A6-205ENST00000468338 FBXO31Q5XUX0 539 aaPredicted RBP17.12■□□□□ 0.33
COL4A6-205ENST00000468338 STRCQ7RTU9 1775 aa17.12■□□□□ 0.33
COL4A6-205ENST00000468338 ROCK1Q13464 1354 aa17.11■□□□□ 0.33
COL4A6-205ENST00000468338 RRBP1Q9P2E9 1410 aaKnown RBP17.11■□□□□ 0.33
COL4A6-205ENST00000468338 MYO3AQ8NEV4 1616 aa17.1■□□□□ 0.33
COL4A6-205ENST00000468338 ZNF142P52746 1687 aaPredicted RBP17.1■□□□□ 0.33
COL4A6-205ENST00000468338 ARHGAP31Q2M1Z3 1444 aa17.09■□□□□ 0.33
COL4A6-205ENST00000468338 VWDEQ8N2E2 1590 aa17.09■□□□□ 0.33
COL4A6-205ENST00000468338 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
COL4A6-205ENST00000468338 CEP152O94986 1710 aa17.08■□□□□ 0.32
COL4A6-205ENST00000468338 ANKRD50Q9ULJ7 1429 aa17.08■□□□□ 0.32
COL4A6-205ENST00000468338 TNRQ92752 1358 aa17.08■□□□□ 0.32
COL4A6-205ENST00000468338 A2ML1A8K2U0 1454 aa17.07■□□□□ 0.32
COL4A6-205ENST00000468338 CAMSAP1Q5T5Y3 1602 aa17.07■□□□□ 0.32
COL4A6-205ENST00000468338 SPATA31D1Q6ZQQ2 1576 aa17.06■□□□□ 0.32
COL4A6-205ENST00000468338 LMTK2Q8IWU2 1503 aa17.06■□□□□ 0.32
COL4A6-205ENST00000468338 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
COL4A6-205ENST00000468338 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
COL4A6-205ENST00000468338 ERVK-7P63135 1459 aa17.04■□□□□ 0.32
COL4A6-205ENST00000468338 NLRP1Q9C000 1473 aa17.04■□□□□ 0.32
COL4A6-205ENST00000468338 PTPRTO14522 1441 aa17.04■□□□□ 0.32
COL4A6-205ENST00000468338 KANK1Q14678 1352 aa17.03■□□□□ 0.32
COL4A6-205ENST00000468338 CFAP65Q6ZU64 1925 aaKnown RBP17.02■□□□□ 0.32
COL4A6-205ENST00000468338 PKD2Q13563 968 aa17■□□□□ 0.31
COL4A6-205ENST00000468338 ITGAEP38570 1179 aa16.99■□□□□ 0.31
COL4A6-205ENST00000468338 UNC13BO14795 1591 aa16.98■□□□□ 0.31
COL4A6-205ENST00000468338 EFCAB6Q5THR3 1501 aa16.97■□□□□ 0.31
COL4A6-205ENST00000468338 UGGT1Q9NYU2 1555 aa16.97■□□□□ 0.31
COL4A6-205ENST00000468338 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.31
COL4A6-205ENST00000468338 THEMISQ8N1K5 641 aaPredicted RBP16.96■□□□□ 0.31
COL4A6-205ENST00000468338 NOS1P29475 1434 aa16.96■□□□□ 0.3
COL4A6-205ENST00000468338 RPRD2Q5VT52 1461 aaKnown RBP16.95■□□□□ 0.3
COL4A6-205ENST00000468338 TET3O43151 1660 aa16.94■□□□□ 0.3
COL4A6-205ENST00000468338 NAIPQ13075 1403 aa16.93■□□□□ 0.3
COL4A6-205ENST00000468338 IQGAP3Q86VI3 1631 aa16.92■□□□□ 0.3
COL4A6-205ENST00000468338 UBR1Q8IWV7 1749 aa16.91■□□□□ 0.3
COL4A6-205ENST00000468338 NEURL4Q96JN8 1562 aa16.91■□□□□ 0.3
COL4A6-205ENST00000468338 GCC2Q8IWJ2 1684 aa16.91■□□□□ 0.3
COL4A6-205ENST00000468338 POLR1AO95602 1720 aaPredicted RBP16.9■□□□□ 0.3
COL4A6-205ENST00000468338 SYNMO15061 1565 aa16.9■□□□□ 0.3
COL4A6-205ENST00000468338 IDI1Q13907 227 aa16.9■□□□□ 0.3
COL4A6-205ENST00000468338 ILDR1Q86SU0 546 aaPredicted RBP16.9■□□□□ 0.3
COL4A6-205ENST00000468338 ANKLE2Q86XL3 938 aa16.9■□□□□ 0.3
COL4A6-205ENST00000468338 MED14O60244 1454 aa16.9■□□□□ 0.3
COL4A6-205ENST00000468338 LTBP4Q8N2S1 1624 aa16.89■□□□□ 0.29
COL4A6-205ENST00000468338 HFM1A2PYH4 1435 aa16.89■□□□□ 0.29
COL4A6-205ENST00000468338 KDM5AP29375 1690 aaKnown RBP16.89■□□□□ 0.29
COL4A6-205ENST00000468338 CERKQ8TCT0 537 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms