RNA–Protein interactions for RNA: ENST00000468311.1

PFDN2-202, Transcript of prefoldin subunit 2, humanhuman

TSL 2

Gene PFDN2, Length 408 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-202ENST00000468311 KDM5DQ9BY66 1539 aa35.62■■■■□ 3.29
PFDN2-202ENST00000468311 KIF15Q9NS87 1388 aa35.61■■■■□ 3.29
PFDN2-202ENST00000468311 HSPA2P54652 639 aa35.6■■■■□ 3.29
PFDN2-202ENST00000468311 RNF17Q9BXT8 1623 aaKnown RBP35.59■■■■□ 3.29
PFDN2-202ENST00000468311 ERBINQ96RT1 1412 aa35.57■■■■□ 3.29
PFDN2-202ENST00000468311 PTPRKQ15262 1439 aa35.57■■■■□ 3.28
PFDN2-202ENST00000468311 ANKRD30AQ9BXX3 1397 aa35.56■■■■□ 3.28
PFDN2-202ENST00000468311 WASHC2CQ9Y4E1 1318 aa35.56■■■■□ 3.28
PFDN2-202ENST00000468311 FAM50AQ14320 339 aaKnown RBP35.53■■■■□ 3.28
PFDN2-202ENST00000468311 RRP7BPQ9NSQ0 103 aa35.51■■■■□ 3.28
PFDN2-202ENST00000468311 ADGRL2O95490 1459 aa35.51■■■■□ 3.28
PFDN2-202ENST00000468311 NCOA1Q15788 1441 aa35.5■■■■□ 3.27
PFDN2-202ENST00000468311 PZPP20742 1482 aa35.48■■■■□ 3.27
PFDN2-202ENST00000468311 ZC3H13Q5T200 1668 aaKnown RBP35.46■■■■□ 3.27
PFDN2-202ENST00000468311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.45■■■■□ 3.277e-9■□□□□ 11
PFDN2-202ENST00000468311 MROH1Q8NDA8 1641 aa35.44■■■■□ 3.26
PFDN2-202ENST00000468311 CHIC2Q9UKJ5 165 aa35.44■■■■□ 3.26
PFDN2-202ENST00000468311 ABCC3O15438 1527 aa35.43■■■■□ 3.26
PFDN2-202ENST00000468311 PRDM15P57071 1507 aaPredicted RBP35.42■■■■□ 3.26
PFDN2-202ENST00000468311 MYO3AQ8NEV4 1616 aa35.39■■■■□ 3.26
PFDN2-202ENST00000468311 ZNF142P52746 1687 aaPredicted RBP35.38■■■■□ 3.25
PFDN2-202ENST00000468311 DMRT2Q9Y5R5 561 aa35.38■■■■□ 3.25
PFDN2-202ENST00000468311 DEPDC5O75140 1603 aa35.36■■■■□ 3.25
PFDN2-202ENST00000468311 TNRQ92752 1358 aa35.35■■■■□ 3.25
PFDN2-202ENST00000468311 CEP170BQ9Y4F5 1589 aaPredicted RBP35.34■■■■□ 3.25
PFDN2-202ENST00000468311 PPARGC1BQ86YN6 1023 aaKnown RBP35.34■■■■□ 3.25
PFDN2-202ENST00000468311 ROCK1Q13464 1354 aa35.33■■■■□ 3.25
PFDN2-202ENST00000468311 FBXO31Q5XUX0 539 aaPredicted RBP35.32■■■■□ 3.24
PFDN2-202ENST00000468311 A2ML1A8K2U0 1454 aa35.32■■■■□ 3.24
PFDN2-202ENST00000468311 KANK1Q14678 1352 aa35.31■■■■□ 3.24
PFDN2-202ENST00000468311 STRCQ7RTU9 1775 aa35.3■■■■□ 3.24
PFDN2-202ENST00000468311 ARHGAP31Q2M1Z3 1444 aa35.29■■■■□ 3.24
PFDN2-202ENST00000468311 ANKRD50Q9ULJ7 1429 aa35.29■■■■□ 3.24
PFDN2-202ENST00000468311 PLA2R1Q13018 1463 aa35.29■■■■□ 3.24
PFDN2-202ENST00000468311 NLRP1Q9C000 1473 aa35.28■■■■□ 3.24
PFDN2-202ENST00000468311 CAMSAP1Q5T5Y3 1602 aa35.27■■■■□ 3.24
PFDN2-202ENST00000468311 SPATA31D1Q6ZQQ2 1576 aa35.26■■■■□ 3.24
PFDN2-202ENST00000468311 PTPRTO14522 1441 aa35.26■■■■□ 3.24
PFDN2-202ENST00000468311 RRBP1Q9P2E9 1410 aaKnown RBP35.26■■■■□ 3.24
PFDN2-202ENST00000468311 LMTK2Q8IWU2 1503 aa35.24■■■■□ 3.23
PFDN2-202ENST00000468311 VWDEQ8N2E2 1590 aa35.24■■■■□ 3.23
PFDN2-202ENST00000468311 CEP152O94986 1710 aa35.23■■■■□ 3.23
PFDN2-202ENST00000468311 ERVK-7P63135 1459 aa35.22■■■■□ 3.23
PFDN2-202ENST00000468311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.22■■■■□ 3.231e-8■■□□□ 12.4
PFDN2-202ENST00000468311 PKD2Q13563 968 aa35.19■■■■□ 3.22
PFDN2-202ENST00000468311 THEMISQ8N1K5 641 aaPredicted RBP35.11■■■■□ 3.21
PFDN2-202ENST00000468311 UGGT1Q9NYU2 1555 aa35.11■■■■□ 3.21
PFDN2-202ENST00000468311 ITGAEP38570 1179 aa35.09■■■■□ 3.21
PFDN2-202ENST00000468311 EFCAB6Q5THR3 1501 aa35.08■■■■□ 3.21
PFDN2-202ENST00000468311 UNC13BO14795 1591 aa35.07■■■■□ 3.2
PFDN2-202ENST00000468311 NCKAP5LQ9HCH0 1330 aa35.06■■■■□ 3.2
PFDN2-202ENST00000468311 RPRD2Q5VT52 1461 aaKnown RBP35.05■■■■□ 3.2
PFDN2-202ENST00000468311 ILDR1Q86SU0 546 aaPredicted RBP35■■■■□ 3.19
PFDN2-202ENST00000468311 ANKLE2Q86XL3 938 aa34.99■■■■□ 3.19
PFDN2-202ENST00000468311 NOS1P29475 1434 aa34.98■■■■□ 3.19
PFDN2-202ENST00000468311 CERKQ8TCT0 537 aa34.97■■■■□ 3.19
PFDN2-202ENST00000468311 FBXO41Q8TF61 875 aa34.97■■■■□ 3.19
PFDN2-202ENST00000468311 TET3O43151 1660 aa34.97■■■■□ 3.19
PFDN2-202ENST00000468311 POLR1AO95602 1720 aaPredicted RBP34.94■■■■□ 3.18
PFDN2-202ENST00000468311 IQGAP3Q86VI3 1631 aa34.92■■■■□ 3.18
PFDN2-202ENST00000468311 MED14O60244 1454 aa34.92■■■■□ 3.18
PFDN2-202ENST00000468311 UBR1Q8IWV7 1749 aa34.92■■■■□ 3.18
PFDN2-202ENST00000468311 NEURL4Q96JN8 1562 aa34.91■■■■□ 3.18
PFDN2-202ENST00000468311 GCC2Q8IWJ2 1684 aa34.9■■■■□ 3.18
PFDN2-202ENST00000468311 SLC52A1Q9NWF4 448 aa34.9■■■■□ 3.18
PFDN2-202ENST00000468311 CFAP65Q6ZU64 1925 aaKnown RBP34.9■■■■□ 3.18
PFDN2-202ENST00000468311 NUP155O75694 1391 aa34.89■■■■□ 3.18
PFDN2-202ENST00000468311 SYNMO15061 1565 aa34.89■■■■□ 3.18
PFDN2-202ENST00000468311 NAIPQ13075 1403 aa34.89■■■■□ 3.18
PFDN2-202ENST00000468311 KDM5AP29375 1690 aaKnown RBP34.89■■■■□ 3.18
PFDN2-202ENST00000468311 LTBP4Q8N2S1 1624 aa34.88■■■■□ 3.17
PFDN2-202ENST00000468311 SLIT1O75093 1534 aa34.87■■■■□ 3.17
PFDN2-202ENST00000468311 ARHGAP23Q9P227 1491 aa34.86■■■■□ 3.17
PFDN2-202ENST00000468311 HFM1A2PYH4 1435 aa34.86■■■■□ 3.17
PFDN2-202ENST00000468311 IDI1Q13907 227 aa34.85■■■■□ 3.17
PFDN2-202ENST00000468311 PIK3C2BO00750 1634 aa34.84■■■■□ 3.17
PFDN2-202ENST00000468311 NPHP4O75161 1426 aaPredicted RBP34.84■■■■□ 3.17
PFDN2-202ENST00000468311 STAG3Q9UJ98 1225 aa34.81■■■■□ 3.16
PFDN2-202ENST00000468311 IQSEC2Q5JU85 1478 aa34.81■■■■□ 3.16
PFDN2-202ENST00000468311 ZNF335Q9H4Z2 1342 aaPredicted RBP34.8■■■■□ 3.16
PFDN2-202ENST00000468311 SCAF11Q99590 1463 aaKnown RBP34.79■■■■□ 3.16
PFDN2-202ENST00000468311 TMEM2Q9UHN6 1383 aa34.79■■■■□ 3.16
PFDN2-202ENST00000468311 ADGRB3O60242 1522 aa34.77■■■■□ 3.16
PFDN2-202ENST00000468311 E9PCH4 1651 aa34.77■■■■□ 3.16
PFDN2-202ENST00000468311 EID1Q9Y6B2 187 aa34.76■■■■□ 3.16
PFDN2-202ENST00000468311 IQGAP1P46940 1657 aa34.74■■■■□ 3.15
PFDN2-202ENST00000468311 TXNDC2Q86VQ3 553 aa34.73■■■■□ 3.15
PFDN2-202ENST00000468311 LTKP29376 864 aa34.71■■■■□ 3.15
PFDN2-202ENST00000468311 CPS1P31327 1500 aa34.67■■■■□ 3.14
PFDN2-202ENST00000468311 TMEM131LA2VDJ0 1609 aa34.61■■■■□ 3.13
PFDN2-202ENST00000468311 HDGFP51858 240 aaKnown RBP34.6■■■■□ 3.13
PFDN2-202ENST00000468311 ZFYVE9O95405 1425 aa34.58■■■■□ 3.13
PFDN2-202ENST00000468311 ACIN1Q9UKV3 1341 aaKnown RBP34.57■■■■□ 3.13
PFDN2-202ENST00000468311 TRIM52Q96A61 297 aa34.55■■■■□ 3.12
PFDN2-202ENST00000468311 SPHKAPQ2M3C7 1700 aa34.54■■■■□ 3.12
PFDN2-202ENST00000468311 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.52■■■■□ 3.12
PFDN2-202ENST00000468311 RIMS2Q9UQ26 1411 aa34.52■■■■□ 3.12
PFDN2-202ENST00000468311 TRPM2O94759 1503 aa34.5■■■■□ 3.11
PFDN2-202ENST00000468311 CHGAP10645 457 aaKnown RBP34.49■■■■□ 3.11
PFDN2-202ENST00000468311 SLC4A1APQ9BWU0 796 aaKnown RBP34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms