RNA–Protein interactions for RNA: ENST00000468166.5

SND1-206, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-206ENST00000468166 MPHOSPH9Q99550 1183 aa11.65□□□□□ -0.54
SND1-206ENST00000468166 ZMYM4Q5VZL5 1548 aa11.64□□□□□ -0.55
SND1-206ENST00000468166 FAM135AQ9P2D6 1515 aa11.64□□□□□ -0.55
SND1-206ENST00000468166 NUP155O75694 1391 aa11.64□□□□□ -0.55
SND1-206ENST00000468166 SLC4A1APQ9BWU0 796 aaKnown RBP11.63□□□□□ -0.55
SND1-206ENST00000468166 DIP2CQ9Y2E4 1556 aa11.62□□□□□ -0.55
SND1-206ENST00000468166 DNAJC5Q9H3Z4 198 aa11.62□□□□□ -0.55
SND1-206ENST00000468166 BCORL1Q5H9F3 1711 aa11.61□□□□□ -0.55
SND1-206ENST00000468166 A2MP01023 1474 aa11.61□□□□□ -0.55
SND1-206ENST00000468166 RNF17Q9BXT8 1623 aaKnown RBP11.6□□□□□ -0.55
SND1-206ENST00000468166 DHX29Q7Z478 1369 aaKnown RBP11.6□□□□□ -0.55
SND1-206ENST00000468166 RAPGEF3O95398 923 aa11.6□□□□□ -0.55
SND1-206ENST00000468166 NEUROD1Q13562 356 aa11.6□□□□□ -0.55
SND1-206ENST00000468166 PRDM15P57071 1507 aaPredicted RBP11.6□□□□□ -0.55
SND1-206ENST00000468166 SIN3AQ96ST3 1273 aa11.59□□□□□ -0.55
SND1-206ENST00000468166 MROH1Q8NDA8 1641 aa11.58□□□□□ -0.56
SND1-206ENST00000468166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.58□□□□□ -0.56
SND1-206ENST00000468166 TET3O43151 1660 aa11.58□□□□□ -0.56
SND1-206ENST00000468166 TONSLQ96HA7 1378 aa11.57□□□□□ -0.56
SND1-206ENST00000468166 ANKRD30BQ9BXX2 1392 aa11.57□□□□□ -0.56
SND1-206ENST00000468166 PKD2Q13563 968 aa11.57□□□□□ -0.56
SND1-206ENST00000468166 VWDEQ8N2E2 1590 aa11.57□□□□□ -0.56
SND1-206ENST00000468166 KANK1Q14678 1352 aa11.56□□□□□ -0.56
SND1-206ENST00000468166 CEP152O94986 1710 aa11.56□□□□□ -0.56
SND1-206ENST00000468166 TIMELESSQ9UNS1 1208 aa11.56□□□□□ -0.56
SND1-206ENST00000468166 RPRD2Q5VT52 1461 aaKnown RBP11.56□□□□□ -0.56
SND1-206ENST00000468166 E9PCH4 1651 aa11.55□□□□□ -0.56
SND1-206ENST00000468166 YEATS2Q9ULM3 1422 aa11.55□□□□□ -0.56
SND1-206ENST00000468166 KIF3BO15066 747 aa11.55□□□□□ -0.56
SND1-206ENST00000468166 ARHGEF40Q8TER5 1519 aa11.55□□□□□ -0.56
SND1-206ENST00000468166 REREQ9P2R6 1566 aa11.54□□□□□ -0.56
SND1-206ENST00000468166 SPHKAPQ2M3C7 1700 aa11.53□□□□□ -0.56
SND1-206ENST00000468166 ZC3H13Q5T200 1668 aaKnown RBP11.52□□□□□ -0.56
SND1-206ENST00000468166 EFCAB6Q5THR3 1501 aa11.52□□□□□ -0.57
SND1-206ENST00000468166 TRHP20396 242 aaPredicted RBP11.52□□□□□ -0.57
SND1-206ENST00000468166 ATP10AO60312 1499 aa11.51□□□□□ -0.57
SND1-206ENST00000468166 COL17A1Q9UMD9 1497 aaPredicted RBP11.51□□□□□ -0.57
SND1-206ENST00000468166 LMTK2Q8IWU2 1503 aa11.51□□□□□ -0.57
SND1-206ENST00000468166 CAMSAP1Q5T5Y3 1602 aa11.5□□□□□ -0.57
SND1-206ENST00000468166 CCDC144AA2RUR9 1427 aa11.49□□□□□ -0.57
SND1-206ENST00000468166 ABCC3O15438 1527 aa11.49□□□□□ -0.57
SND1-206ENST00000468166 TRPM2O94759 1503 aa11.49□□□□□ -0.57
SND1-206ENST00000468166 AGLP35573 1532 aa11.49□□□□□ -0.57
SND1-206ENST00000468166 SIGLEC1Q9BZZ2 1709 aa11.47□□□□□ -0.57
SND1-206ENST00000468166 PLA2R1Q13018 1463 aa11.46□□□□□ -0.57
SND1-206ENST00000468166 PPP1R15AO75807 674 aaPredicted RBP11.46□□□□□ -0.57
SND1-206ENST00000468166 GGT6Q6P531 493 aa11.46□□□□□ -0.57
SND1-206ENST00000468166 CLTCL1P53675 1640 aa11.46□□□□□ -0.58
SND1-206ENST00000468166 PTPRTO14522 1441 aa11.44□□□□□ -0.58
SND1-206ENST00000468166 L3MBTL2Q969R5 705 aa11.44□□□□□ -0.58
SND1-206ENST00000468166 WASHC2CQ9Y4E1 1318 aa11.43□□□□□ -0.58
SND1-206ENST00000468166 KIF1BO60333 1816 aa11.43□□□□□ -0.58
SND1-206ENST00000468166 CLTCQ00610 1675 aaKnown RBP11.43□□□□□ -0.58
SND1-206ENST00000468166 CFAP65Q6ZU64 1925 aaKnown RBP11.43□□□□□ -0.58
SND1-206ENST00000468166 ZNF316A6NFI3 1004 aaPredicted RBP11.41□□□□□ -0.58
SND1-206ENST00000468166 NPATQ14207 1427 aa11.41□□□□□ -0.58
SND1-206ENST00000468166 PREX1Q8TCU6 1659 aa11.4□□□□□ -0.58
SND1-206ENST00000468166 ARHGAP31Q2M1Z3 1444 aa11.4□□□□□ -0.58
SND1-206ENST00000468166 NEURL4Q96JN8 1562 aa11.39□□□□□ -0.59
SND1-206ENST00000468166 CNTLNQ9NXG0 1405 aa11.39□□□□□ -0.59
SND1-206ENST00000468166 UGGT1Q9NYU2 1555 aa11.39□□□□□ -0.59
SND1-206ENST00000468166 MROH2AA6NES4 1674 aa11.38□□□□□ -0.59
SND1-206ENST00000468166 PIK3C2BO00750 1634 aa11.38□□□□□ -0.59
SND1-206ENST00000468166 SYNMO15061 1565 aa11.37□□□□□ -0.59
SND1-206ENST00000468166 UHRF1BP1Q6BDS2 1440 aa11.37□□□□□ -0.59
SND1-206ENST00000468166 SPATA31E1Q6ZUB1 1445 aa11.37□□□□□ -0.59
SND1-206ENST00000468166 IFT172Q9UG01 1749 aa11.36□□□□□ -0.59
SND1-206ENST00000468166 ARID4BQ4LE39 1312 aaPredicted RBP11.35□□□□□ -0.59
SND1-206ENST00000468166 NOS1P29475 1434 aa11.35□□□□□ -0.59
SND1-206ENST00000468166 ADGRB3O60242 1522 aa11.35□□□□□ -0.59
SND1-206ENST00000468166 MLECQ14165 292 aa11.35□□□□□ -0.59
SND1-206ENST00000468166 ZNF326Q5BKZ1 582 aaKnown RBP11.35□□□□□ -0.59
SND1-206ENST00000468166 RALGAPBQ86X10 1494 aa11.35□□□□□ -0.59
SND1-206ENST00000468166 TRPM1Q7Z4N2 1603 aa11.35□□□□□ -0.59
SND1-206ENST00000468166 FER1L4A9Z1Z3 1794 aa11.34□□□□□ -0.59
SND1-206ENST00000468166 NBPF8Q3BBV2 869 aa11.34□□□□□ -0.59
SND1-206ENST00000468166 RGL3Q3MIN7 710 aa11.34□□□□□ -0.59
SND1-206ENST00000468166 DCAF11Q8TEB1 546 aa11.34□□□□□ -0.59
SND1-206ENST00000468166 MADDQ8WXG6 1647 aa11.34□□□□□ -0.59
SND1-206ENST00000468166 ERVK-7P63135 1459 aa11.33□□□□□ -0.6
SND1-206ENST00000468166 PIAS4Q8N2W9 510 aaPredicted RBP11.33□□□□□ -0.6
SND1-206ENST00000468166 ESF1Q9H501 851 aaKnown RBP11.33□□□□□ -0.6
SND1-206ENST00000468166 PRAG1Q86YV5 1406 aa11.33□□□□□ -0.6
SND1-206ENST00000468166 SPATA31D1Q6ZQQ2 1576 aa11.33□□□□□ -0.6
SND1-206ENST00000468166 PPLO60437 1756 aa11.32□□□□□ -0.6
SND1-206ENST00000468166 KDM2AQ9Y2K7 1162 aa11.32□□□□□ -0.6
SND1-206ENST00000468166 MYO5BQ9ULV0 1848 aa11.31□□□□□ -0.6
SND1-206ENST00000468166 MYOM2P54296 1465 aa11.31□□□□□ -0.6
SND1-206ENST00000468166 LAMC1P11047 1609 aa11.31□□□□□ -0.6
SND1-206ENST00000468166 KIAA1210Q9ULL0 1709 aa11.29□□□□□ -0.6
SND1-206ENST00000468166 POLR1AO95602 1720 aaPredicted RBP11.29□□□□□ -0.6
SND1-206ENST00000468166 TMEM131LA2VDJ0 1609 aa11.28□□□□□ -0.6
SND1-206ENST00000468166 C3P01024 1663 aa11.28□□□□□ -0.6
SND1-206ENST00000468166 CHGAP10645 457 aaKnown RBP11.28□□□□□ -0.6
SND1-206ENST00000468166 EIF4G2P78344 907 aaKnown RBP eCLIP11.28□□□□□ -0.6
SND1-206ENST00000468166 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
SND1-206ENST00000468166 ROCK2O75116 1388 aaKnown RBP11.28□□□□□ -0.6
SND1-206ENST00000468166 DIEXFQ68CQ4 756 aaKnown RBP11.27□□□□□ -0.61
SND1-206ENST00000468166 SLC52A1Q9NWF4 448 aa11.27□□□□□ -0.61
SND1-206ENST00000468166 ZMYM3Q14202 1370 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms