RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 CEP170BQ9Y4F5 1589 aaPredicted RBP21.05■□□□□ 0.96
C9orf3-212ENST00000468164 KDM5DQ9BY66 1539 aa21.04■□□□□ 0.96
C9orf3-212ENST00000468164 PPP6R1Q9UPN7 881 aa21.04■□□□□ 0.96
C9orf3-212ENST00000468164 CERKQ8TCT0 537 aa21.03■□□□□ 0.96
C9orf3-212ENST00000468164 WASHC2CQ9Y4E1 1318 aa21.02■□□□□ 0.95
C9orf3-212ENST00000468164 CEP152O94986 1710 aa21.01■□□□□ 0.95
C9orf3-212ENST00000468164 NCOA1Q15788 1441 aa21.01■□□□□ 0.95
C9orf3-212ENST00000468164 RNF17Q9BXT8 1623 aaKnown RBP21■□□□□ 0.95
C9orf3-212ENST00000468164 EIF2AK4Q9P2K8 1649 aaKnown RBP21■□□□□ 0.95
C9orf3-212ENST00000468164 PTPRTO14522 1441 aa20.97■□□□□ 0.95
C9orf3-212ENST00000468164 ZC3H13Q5T200 1668 aaKnown RBP20.97■□□□□ 0.95
C9orf3-212ENST00000468164 FBXO31Q5XUX0 539 aaPredicted RBP20.97■□□□□ 0.95
C9orf3-212ENST00000468164 FAM135AQ9P2D6 1515 aa20.97■□□□□ 0.95
C9orf3-212ENST00000468164 NCKAP5LQ9HCH0 1330 aa20.97■□□□□ 0.95
C9orf3-212ENST00000468164 DNMT1P26358 1616 aaKnown RBP20.96■□□□□ 0.95
C9orf3-212ENST00000468164 POLR1AO95602 1720 aaPredicted RBP20.96■□□□□ 0.95
C9orf3-212ENST00000468164 PZPP20742 1482 aa20.95■□□□□ 0.94
C9orf3-212ENST00000468164 TNRQ92752 1358 aa20.94■□□□□ 0.94
C9orf3-212ENST00000468164 FGD6Q6ZV73 1430 aa20.94■□□□□ 0.94
C9orf3-212ENST00000468164 A2ML1A8K2U0 1454 aa20.94■□□□□ 0.94
C9orf3-212ENST00000468164 DUOX2Q9NRD8 1548 aa20.94■□□□□ 0.94
C9orf3-212ENST00000468164 ABCC5O15440 1437 aa20.92■□□□□ 0.94
C9orf3-212ENST00000468164 ABCC3O15438 1527 aa20.91■□□□□ 0.94
C9orf3-212ENST00000468164 MROH1Q8NDA8 1641 aa20.91■□□□□ 0.94
C9orf3-212ENST00000468164 PLA2R1Q13018 1463 aa20.9■□□□□ 0.94
C9orf3-212ENST00000468164 SHANK2Q9UPX8 1470 aa20.9■□□□□ 0.94
C9orf3-212ENST00000468164 DAPK1P53355 1430 aa20.9■□□□□ 0.94
C9orf3-212ENST00000468164 KIF15Q9NS87 1388 aa20.9■□□□□ 0.94
C9orf3-212ENST00000468164 RRP7BPQ9NSQ0 103 aa20.9■□□□□ 0.94
C9orf3-212ENST00000468164 TCOF1Q13428 1488 aaKnown RBP20.88■□□□□ 0.93
C9orf3-212ENST00000468164 CHIC2Q9UKJ5 165 aa20.88■□□□□ 0.93
C9orf3-212ENST00000468164 LTBP4Q8N2S1 1624 aa20.87■□□□□ 0.93
C9orf3-212ENST00000468164 PKD2Q13563 968 aa20.86■□□□□ 0.93
C9orf3-212ENST00000468164 FAM50AQ14320 339 aaKnown RBP20.85■□□□□ 0.93
C9orf3-212ENST00000468164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.85■□□□□ 0.931e-6■■□□□ 11.7
C9orf3-212ENST00000468164 UGGT1Q9NYU2 1555 aa20.84■□□□□ 0.93
C9orf3-212ENST00000468164 ERBINQ96RT1 1412 aa20.83■□□□□ 0.93
C9orf3-212ENST00000468164 DEPDC5O75140 1603 aa20.82■□□□□ 0.92
C9orf3-212ENST00000468164 NLRP1Q9C000 1473 aa20.82■□□□□ 0.92
C9orf3-212ENST00000468164 ZNF335Q9H4Z2 1342 aaPredicted RBP20.82■□□□□ 0.92
C9orf3-212ENST00000468164 PRDM15P57071 1507 aaPredicted RBP20.82■□□□□ 0.92
C9orf3-212ENST00000468164 SPATA31D1Q6ZQQ2 1576 aa20.81■□□□□ 0.92
C9orf3-212ENST00000468164 ANKRD30AQ9BXX3 1397 aa20.81■□□□□ 0.92
C9orf3-212ENST00000468164 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.81■□□□□ 0.922e-9■■■■■ 67.4
C9orf3-212ENST00000468164 ERVK-7P63135 1459 aa20.81■□□□□ 0.92
C9orf3-212ENST00000468164 NEURL4Q96JN8 1562 aa20.8■□□□□ 0.92
C9orf3-212ENST00000468164 UBR1Q8IWV7 1749 aa20.78■□□□□ 0.92
C9orf3-212ENST00000468164 THEMISQ8N1K5 641 aaPredicted RBP20.78■□□□□ 0.92
C9orf3-212ENST00000468164 KANK1Q14678 1352 aa20.76■□□□□ 0.91
C9orf3-212ENST00000468164 PPARGC1BQ86YN6 1023 aaKnown RBP20.76■□□□□ 0.91
C9orf3-212ENST00000468164 IQGAP1P46940 1657 aa20.75■□□□□ 0.91
C9orf3-212ENST00000468164 ANKLE2Q86XL3 938 aa20.75■□□□□ 0.91
C9orf3-212ENST00000468164 IQSEC2Q5JU85 1478 aa20.73■□□□□ 0.91
C9orf3-212ENST00000468164 PIK3C2BO00750 1634 aa20.71■□□□□ 0.91
C9orf3-212ENST00000468164 ADGRL2O95490 1459 aa20.71■□□□□ 0.91
C9orf3-212ENST00000468164 NPHP4O75161 1426 aaPredicted RBP20.7■□□□□ 0.9
C9orf3-212ENST00000468164 ARHGAP31Q2M1Z3 1444 aa20.69■□□□□ 0.9
C9orf3-212ENST00000468164 UBAP1LF5GYI3 381 aa20.67■□□□□ 0.9
C9orf3-212ENST00000468164 VWDEQ8N2E2 1590 aa20.67■□□□□ 0.9
C9orf3-212ENST00000468164 ITGAEP38570 1179 aa20.66■□□□□ 0.9
C9orf3-212ENST00000468164 STRCP1A6NGW2 1772 aa20.65■□□□□ 0.9
C9orf3-212ENST00000468164 EFCAB6Q5THR3 1501 aa20.65■□□□□ 0.9
C9orf3-212ENST00000468164 MED14O60244 1454 aa20.65■□□□□ 0.9
C9orf3-212ENST00000468164 ANKRD50Q9ULJ7 1429 aa20.65■□□□□ 0.9
C9orf3-212ENST00000468164 STAG3Q9UJ98 1225 aa20.65■□□□□ 0.9
C9orf3-212ENST00000468164 MYO5BQ9ULV0 1848 aa20.64■□□□□ 0.9
C9orf3-212ENST00000468164 LMTK2Q8IWU2 1503 aa20.64■□□□□ 0.9
C9orf3-212ENST00000468164 CPS1P31327 1500 aa20.63■□□□□ 0.89
C9orf3-212ENST00000468164 GCC2Q8IWJ2 1684 aa20.63■□□□□ 0.89
C9orf3-212ENST00000468164 SYNMO15061 1565 aa20.63■□□□□ 0.89
C9orf3-212ENST00000468164 TET3O43151 1660 aa20.61■□□□□ 0.89
C9orf3-212ENST00000468164 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
C9orf3-212ENST00000468164 SCAF11Q99590 1463 aaKnown RBP20.61■□□□□ 0.89
C9orf3-212ENST00000468164 KDM5AP29375 1690 aaKnown RBP20.6■□□□□ 0.89
C9orf3-212ENST00000468164 UNC13BO14795 1591 aa20.59■□□□□ 0.89
C9orf3-212ENST00000468164 TXNDC2Q86VQ3 553 aa20.59■□□□□ 0.89
C9orf3-212ENST00000468164 SLIT1O75093 1534 aa20.58■□□□□ 0.89
C9orf3-212ENST00000468164 LTKP29376 864 aa20.57■□□□□ 0.88
C9orf3-212ENST00000468164 EID1Q9Y6B2 187 aa20.57■□□□□ 0.88
C9orf3-212ENST00000468164 ARHGAP23Q9P227 1491 aa20.56■□□□□ 0.88
C9orf3-212ENST00000468164 PIP4K2BP78356 416 aa20.56■□□□□ 0.88
C9orf3-212ENST00000468164 IDI1Q13907 227 aa20.56■□□□□ 0.88
C9orf3-212ENST00000468164 E9PCH4 1651 aa20.56■□□□□ 0.88
C9orf3-212ENST00000468164 ADGRB3O60242 1522 aa20.54■□□□□ 0.88
C9orf3-212ENST00000468164 NOS1P29475 1434 aa20.53■□□□□ 0.88
C9orf3-212ENST00000468164 DISP3Q9P2K9 1392 aa20.53■□□□□ 0.88
C9orf3-212ENST00000468164 TMEM2Q9UHN6 1383 aa20.53■□□□□ 0.88
C9orf3-212ENST00000468164 IQGAP3Q86VI3 1631 aa20.53■□□□□ 0.88
C9orf3-212ENST00000468164 ROCK1Q13464 1354 aa20.52■□□□□ 0.88
C9orf3-212ENST00000468164 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
C9orf3-212ENST00000468164 RPRD2Q5VT52 1461 aaKnown RBP20.51■□□□□ 0.87
C9orf3-212ENST00000468164 XIRP1Q702N8 1843 aaKnown RBP20.51■□□□□ 0.87
C9orf3-212ENST00000468164 TOM1O60784 492 aa20.51■□□□□ 0.87
C9orf3-212ENST00000468164 LRRC7Q96NW7 1537 aa20.49■□□□□ 0.87
C9orf3-212ENST00000468164 BCANQ96GW7 911 aa20.48■□□□□ 0.87
C9orf3-212ENST00000468164 SLC52A1Q9NWF4 448 aa20.48■□□□□ 0.87
C9orf3-212ENST00000468164 CHGAP10645 457 aaKnown RBP20.47■□□□□ 0.87
C9orf3-212ENST00000468164 NUP155O75694 1391 aa20.46■□□□□ 0.87
C9orf3-212ENST00000468164 TMEM131LA2VDJ0 1609 aa20.45■□□□□ 0.87
C9orf3-212ENST00000468164 SLC26A8Q96RN1 970 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms