RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 ATF5Q9Y2D1 282 aaPredicted RBP10.93□□□□□ -0.66
MSL3-210ENST00000468149 MLH3Q9UHC1 1453 aa10.93□□□□□ -0.66
MSL3-210ENST00000468149 HRCP23327 699 aa10.92□□□□□ -0.66
MSL3-210ENST00000468149 TRAPPC8Q9Y2L5 1435 aa10.92□□□□□ -0.66
MSL3-210ENST00000468149 ZNF777Q9ULD5 760 aaPredicted RBP10.91□□□□□ -0.66
MSL3-210ENST00000468149 MYOM3Q5VTT5 1437 aa10.91□□□□□ -0.66
MSL3-210ENST00000468149 MIA2Q96PC5 1412 aa10.91□□□□□ -0.66
MSL3-210ENST00000468149 BCORL1Q5H9F3 1711 aa10.91□□□□□ -0.66
MSL3-210ENST00000468149 SIGLEC1Q9BZZ2 1709 aa10.91□□□□□ -0.66
MSL3-210ENST00000468149 CAMSAP2Q08AD1 1489 aa10.91□□□□□ -0.66
MSL3-210ENST00000468149 REREQ9P2R6 1566 aa10.91□□□□□ -0.66
MSL3-210ENST00000468149 INO80Q9ULG1 1556 aaPredicted RBP10.91□□□□□ -0.66
MSL3-210ENST00000468149 ABCA6Q8N139 1617 aa10.9□□□□□ -0.66
MSL3-210ENST00000468149 ARHGEF5Q12774 1597 aa10.9□□□□□ -0.66
MSL3-210ENST00000468149 DIP2CQ9Y2E4 1556 aa10.9□□□□□ -0.66
MSL3-210ENST00000468149 MBD5Q9P267 1494 aa10.9□□□□□ -0.66
MSL3-210ENST00000468149 AFAP1Q8N556 730 aa10.9□□□□□ -0.66
MSL3-210ENST00000468149 YEATS2Q9ULM3 1422 aa10.9□□□□□ -0.67
MSL3-210ENST00000468149 ADGBQ8N7X0 1667 aa10.89□□□□□ -0.67
MSL3-210ENST00000468149 ADAMTSL3P82987 1691 aa10.89□□□□□ -0.67
MSL3-210ENST00000468149 ATP10AO60312 1499 aa10.89□□□□□ -0.67
MSL3-210ENST00000468149 ATP7AQ04656 1500 aa10.88□□□□□ -0.67
MSL3-210ENST00000468149 PROM2Q8N271 834 aa10.88□□□□□ -0.67
MSL3-210ENST00000468149 PTPN23Q9H3S7 1636 aa10.88□□□□□ -0.67
MSL3-210ENST00000468149 RSPH4AQ5TD94 716 aa10.87□□□□□ -0.67
MSL3-210ENST00000468149 C9orf84Q5VXU9 1444 aa10.87□□□□□ -0.67
MSL3-210ENST00000468149 CROCC2H7BZ55 1655 aa10.87□□□□□ -0.67
MSL3-210ENST00000468149 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
MSL3-210ENST00000468149 HNRNPMP52272 730 aaKnown RBP eCLIP10.87□□□□□ -0.67
MSL3-210ENST00000468149 CCDC141Q6ZP82 1450 aa10.87□□□□□ -0.67
MSL3-210ENST00000468149 ZNF644Q9H582 1327 aaPredicted RBP10.86□□□□□ -0.67
MSL3-210ENST00000468149 FER1L4A9Z1Z3 1794 aa10.86□□□□□ -0.67
MSL3-210ENST00000468149 C1QBPQ07021 282 aaKnown RBP10.86□□□□□ -0.67
MSL3-210ENST00000468149 RTEL1-TNFRSF6BF6WH68 1400 aa10.85□□□□□ -0.67
MSL3-210ENST00000468149 KDM4FA0A1W2PPD8 638 aa10.85□□□□□ -0.67
MSL3-210ENST00000468149 MAST1Q9Y2H9 1570 aa10.85□□□□□ -0.67
MSL3-210ENST00000468149 FGD6Q6ZV73 1430 aa10.85□□□□□ -0.67
MSL3-210ENST00000468149 AGLP35573 1532 aa10.84□□□□□ -0.67
MSL3-210ENST00000468149 SPAG9O60271 1321 aaKnown RBP10.84□□□□□ -0.67
MSL3-210ENST00000468149 DNMT1P26358 1616 aaKnown RBP10.84□□□□□ -0.67
MSL3-210ENST00000468149 TCOF1Q13428 1488 aaKnown RBP10.84□□□□□ -0.67
MSL3-210ENST00000468149 PLXNC1O60486 1568 aa10.84□□□□□ -0.67
MSL3-210ENST00000468149 MADDQ8WXG6 1647 aa10.83□□□□□ -0.68
MSL3-210ENST00000468149 MYT1LQ9UL68 1186 aa10.83□□□□□ -0.68
MSL3-210ENST00000468149 RIMS1Q86UR5 1692 aaKnown RBP10.82□□□□□ -0.68
MSL3-210ENST00000468149 ARID4BQ4LE39 1312 aaPredicted RBP10.81□□□□□ -0.68
MSL3-210ENST00000468149 RGL2O15211 777 aa10.8□□□□□ -0.68
MSL3-210ENST00000468149 SHANK2Q9UPX8 1470 aa10.8□□□□□ -0.68
MSL3-210ENST00000468149 A2MP01023 1474 aa10.8□□□□□ -0.68
MSL3-210ENST00000468149 TSPY4P0CV99 314 aa10.8□□□□□ -0.68
MSL3-210ENST00000468149 TSPY10P0CW01 314 aa10.8□□□□□ -0.68
MSL3-210ENST00000468149 ZNF219Q9P2Y4 722 aaPredicted RBP10.78□□□□□ -0.68
MSL3-210ENST00000468149 EIF2AK4Q9P2K8 1649 aaKnown RBP10.78□□□□□ -0.68
MSL3-210ENST00000468149 DAPK1P53355 1430 aa10.78□□□□□ -0.68
MSL3-210ENST00000468149 MROH2AA6NES4 1674 aa10.77□□□□□ -0.68
MSL3-210ENST00000468149 SETD1BQ9UPS6 1966 aaKnown RBP10.77□□□□□ -0.68
MSL3-210ENST00000468149 BRPF1P55201 1214 aaPredicted RBP10.76□□□□□ -0.69
MSL3-210ENST00000468149 PTPRMP28827 1452 aa10.76□□□□□ -0.69
MSL3-210ENST00000468149 ABCC5O15440 1437 aa10.76□□□□□ -0.69
MSL3-210ENST00000468149 ILDR1Q86SU0 546 aaPredicted RBP10.76□□□□□ -0.69
MSL3-210ENST00000468149 DHX29Q7Z478 1369 aaKnown RBP10.75□□□□□ -0.69
MSL3-210ENST00000468149 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.75□□□□□ -0.69
MSL3-210ENST00000468149 C3P01024 1663 aa10.75□□□□□ -0.69
MSL3-210ENST00000468149 DUOX2Q9NRD8 1548 aa10.75□□□□□ -0.69
MSL3-210ENST00000468149 RNF17Q9BXT8 1623 aaKnown RBP10.74□□□□□ -0.69
MSL3-210ENST00000468149 SPOCK2Q92563 424 aa10.74□□□□□ -0.69
MSL3-210ENST00000468149 SPINK5Q9NQ38 1064 aaPredicted RBP10.74□□□□□ -0.69
MSL3-210ENST00000468149 FAM135AQ9P2D6 1515 aa10.74□□□□□ -0.69
MSL3-210ENST00000468149 CLTCQ00610 1675 aaKnown RBP10.74□□□□□ -0.69
MSL3-210ENST00000468149 CHGAP10645 457 aaKnown RBP10.73□□□□□ -0.69
MSL3-210ENST00000468149 RRBP1Q9P2E9 1410 aaKnown RBP10.73□□□□□ -0.69
MSL3-210ENST00000468149 ZC3H13Q5T200 1668 aaKnown RBP10.73□□□□□ -0.69
MSL3-210ENST00000468149 MLECQ14165 292 aa10.73□□□□□ -0.69
MSL3-210ENST00000468149 ADGRL2O95490 1459 aa10.72□□□□□ -0.69
MSL3-210ENST00000468149 CNTLNQ9NXG0 1405 aa10.72□□□□□ -0.69
MSL3-210ENST00000468149 PPARGC1BQ86YN6 1023 aaKnown RBP10.72□□□□□ -0.69
MSL3-210ENST00000468149 DEPDC5O75140 1603 aa10.71□□□□□ -0.69
MSL3-210ENST00000468149 CAPN15O75808 1086 aa10.71□□□□□ -0.69
MSL3-210ENST00000468149 FAM50AQ14320 339 aaKnown RBP10.71□□□□□ -0.69
MSL3-210ENST00000468149 PREX1Q8TCU6 1659 aa10.71□□□□□ -0.7
MSL3-210ENST00000468149 NCOA1Q15788 1441 aa10.71□□□□□ -0.7
MSL3-210ENST00000468149 ERBINQ96RT1 1412 aa10.71□□□□□ -0.7
MSL3-210ENST00000468149 ANKRD30AQ9BXX3 1397 aa10.7□□□□□ -0.7
MSL3-210ENST00000468149 KIF15Q9NS87 1388 aa10.7□□□□□ -0.7
MSL3-210ENST00000468149 MROH1Q8NDA8 1641 aa10.69□□□□□ -0.7
MSL3-210ENST00000468149 ESF1Q9H501 851 aaKnown RBP10.69□□□□□ -0.7
MSL3-210ENST00000468149 KDM5DQ9BY66 1539 aa10.69□□□□□ -0.7
MSL3-210ENST00000468149 CEP152O94986 1710 aa10.68□□□□□ -0.7
MSL3-210ENST00000468149 PRDM15P57071 1507 aaPredicted RBP10.68□□□□□ -0.7
MSL3-210ENST00000468149 KIF3BO15066 747 aa10.68□□□□□ -0.7
MSL3-210ENST00000468149 CFAP65Q6ZU64 1925 aaKnown RBP10.67□□□□□ -0.7
MSL3-210ENST00000468149 ROCK1Q13464 1354 aa10.67□□□□□ -0.7
MSL3-210ENST00000468149 GGT6Q6P531 493 aa10.67□□□□□ -0.7
MSL3-210ENST00000468149 PTPRKQ15262 1439 aa10.66□□□□□ -0.7
MSL3-210ENST00000468149 CCDC9Q9Y3X0 531 aaKnown RBP10.66□□□□□ -0.7
MSL3-210ENST00000468149 CAMSAP1Q5T5Y3 1602 aa10.66□□□□□ -0.7
MSL3-210ENST00000468149 RRP7BPQ9NSQ0 103 aa10.66□□□□□ -0.7
MSL3-210ENST00000468149 CHIC2Q9UKJ5 165 aa10.66□□□□□ -0.7
MSL3-210ENST00000468149 GCC2Q8IWJ2 1684 aa10.65□□□□□ -0.7
MSL3-210ENST00000468149 ZMYM3Q14202 1370 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms