RNA–Protein interactions for RNA: ENST00000467949.1

TSC2-211, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-211ENST00000467949 CCDC141Q6ZP82 1450 aa22.24■■□□□ 1.15
TSC2-211ENST00000467949 UBAP1LF5GYI3 381 aa22.23■■□□□ 1.15
TSC2-211ENST00000467949 PPP6R1Q9UPN7 881 aa22.22■■□□□ 1.15
TSC2-211ENST00000467949 DHX29Q7Z478 1369 aaKnown RBP22.22■■□□□ 1.15
TSC2-211ENST00000467949 PZPP20742 1482 aa22.21■■□□□ 1.15
TSC2-211ENST00000467949 NCOA2Q15596 1464 aa22.21■■□□□ 1.15
TSC2-211ENST00000467949 FAM135AQ9P2D6 1515 aa22.21■■□□□ 1.15
TSC2-211ENST00000467949 TNRQ92752 1358 aa22.19■■□□□ 1.14
TSC2-211ENST00000467949 ARHGEF5Q12774 1597 aa22.16■■□□□ 1.14
TSC2-211ENST00000467949 FBXO31Q5XUX0 539 aaPredicted RBP22.16■■□□□ 1.14
TSC2-211ENST00000467949 KIF3BO15066 747 aa22.15■■□□□ 1.14
TSC2-211ENST00000467949 CPS1P31327 1500 aa22.14■■□□□ 1.13
TSC2-211ENST00000467949 RNF17Q9BXT8 1623 aaKnown RBP22.13■■□□□ 1.13
TSC2-211ENST00000467949 VWDEQ8N2E2 1590 aa22.12■■□□□ 1.13
TSC2-211ENST00000467949 ZC3H13Q5T200 1668 aaKnown RBP22.11■■□□□ 1.13
TSC2-211ENST00000467949 SHANK2Q9UPX8 1470 aa22.11■■□□□ 1.13
TSC2-211ENST00000467949 MED1Q15648 1581 aaPredicted RBP22.11■■□□□ 1.13
TSC2-211ENST00000467949 UGGT1Q9NYU2 1555 aa22.11■■□□□ 1.13
TSC2-211ENST00000467949 IQGAP1P46940 1657 aa22.11■■□□□ 1.13
TSC2-211ENST00000467949 DEPDC5O75140 1603 aa22.1■■□□□ 1.13
TSC2-211ENST00000467949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.1■■□□□ 1.133e-8■■■■■ 32.2
TSC2-211ENST00000467949 NLRP1Q9C000 1473 aa22.09■■□□□ 1.13
TSC2-211ENST00000467949 CEP152O94986 1710 aa22.09■■□□□ 1.13
TSC2-211ENST00000467949 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
TSC2-211ENST00000467949 STRCP1A6NGW2 1772 aa22.08■■□□□ 1.13
TSC2-211ENST00000467949 WASHC2CQ9Y4E1 1318 aa22.07■■□□□ 1.12
TSC2-211ENST00000467949 ABCC3O15438 1527 aa22.07■■□□□ 1.12
TSC2-211ENST00000467949 MAST1Q9Y2H9 1570 aa22.07■■□□□ 1.12
TSC2-211ENST00000467949 EIF2AK4Q9P2K8 1649 aaKnown RBP22.06■■□□□ 1.12
TSC2-211ENST00000467949 ALKQ9UM73 1620 aa22.06■■□□□ 1.12
TSC2-211ENST00000467949 MROH1Q8NDA8 1641 aa22.06■■□□□ 1.12
TSC2-211ENST00000467949 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
TSC2-211ENST00000467949 PIP4K2BP78356 416 aa22.05■■□□□ 1.12
TSC2-211ENST00000467949 CFAP65Q6ZU64 1925 aaKnown RBP22.05■■□□□ 1.12
TSC2-211ENST00000467949 NPHP4O75161 1426 aaPredicted RBP22.05■■□□□ 1.12
TSC2-211ENST00000467949 MED14O60244 1454 aa22.03■■□□□ 1.12
TSC2-211ENST00000467949 HSPA1LP34931 641 aa22.03■■□□□ 1.12
TSC2-211ENST00000467949 LRRC9Q6ZRR7 1453 aa22.02■■□□□ 1.12
TSC2-211ENST00000467949 RSPH4AQ5TD94 716 aa22.01■■□□□ 1.11
TSC2-211ENST00000467949 ANKLE2Q86XL3 938 aa22.01■■□□□ 1.11
TSC2-211ENST00000467949 UBR1Q8IWV7 1749 aa22■■□□□ 1.11
TSC2-211ENST00000467949 SYNMO15061 1565 aa22■■□□□ 1.11
TSC2-211ENST00000467949 ERVK-7P63135 1459 aa22■■□□□ 1.11
TSC2-211ENST00000467949 TOM1O60784 492 aa21.98■■□□□ 1.11
TSC2-211ENST00000467949 THEMISQ8N1K5 641 aaPredicted RBP21.98■■□□□ 1.11
TSC2-211ENST00000467949 CROCC2H7BZ55 1655 aa21.97■■□□□ 1.11
TSC2-211ENST00000467949 VPS8Q8N3P4 1428 aa21.97■■□□□ 1.11
TSC2-211ENST00000467949 TSPY4P0CV99 314 aa21.96■■□□□ 1.11
TSC2-211ENST00000467949 TSPY10P0CW01 314 aa21.96■■□□□ 1.11
TSC2-211ENST00000467949 LRRC7Q96NW7 1537 aa21.93■■□□□ 1.1
TSC2-211ENST00000467949 XIRP1Q702N8 1843 aaKnown RBP21.92■■□□□ 1.1
TSC2-211ENST00000467949 PRDM15P57071 1507 aaPredicted RBP21.91■■□□□ 1.1
TSC2-211ENST00000467949 MYOM3Q5VTT5 1437 aa21.91■■□□□ 1.1
TSC2-211ENST00000467949 DUOX2Q9NRD8 1548 aa21.9■■□□□ 1.1
TSC2-211ENST00000467949 SCAF11Q99590 1463 aaKnown RBP21.88■■□□□ 1.09
TSC2-211ENST00000467949 SENP3Q9H4L4 574 aaPredicted RBP21.87■■□□□ 1.09
TSC2-211ENST00000467949 PIK3C2BO00750 1634 aa21.87■■□□□ 1.09
TSC2-211ENST00000467949 MAP3K1Q13233 1512 aa21.86■■□□□ 1.09
TSC2-211ENST00000467949 KANK4Q5T7N3 995 aaPredicted RBP21.86■■□□□ 1.09
TSC2-211ENST00000467949 SLIT1O75093 1534 aa21.85■■□□□ 1.09
TSC2-211ENST00000467949 ARHGAP23Q9P227 1491 aa21.84■■□□□ 1.09
TSC2-211ENST00000467949 PTPN23Q9H3S7 1636 aa21.84■■□□□ 1.09
TSC2-211ENST00000467949 KIF15Q9NS87 1388 aa21.82■■□□□ 1.08
TSC2-211ENST00000467949 ERBINQ96RT1 1412 aa21.81■■□□□ 1.08
TSC2-211ENST00000467949 PHF23Q9BUL5 403 aaPredicted RBP21.81■■□□□ 1.08
TSC2-211ENST00000467949 ARHGAP31Q2M1Z3 1444 aa21.8■■□□□ 1.08
TSC2-211ENST00000467949 ABCC5O15440 1437 aa21.78■■□□□ 1.08
TSC2-211ENST00000467949 LOC105371045A0A1W2PR82 267 aa21.77■■□□□ 1.08
TSC2-211ENST00000467949 LTKP29376 864 aa21.77■■□□□ 1.08
TSC2-211ENST00000467949 KDM5AP29375 1690 aaKnown RBP21.76■■□□□ 1.07
TSC2-211ENST00000467949 DAPK1P53355 1430 aa21.74■■□□□ 1.07
TSC2-211ENST00000467949 TXNDC2Q86VQ3 553 aa21.73■■□□□ 1.07
TSC2-211ENST00000467949 EFCAB6Q5THR3 1501 aa21.73■■□□□ 1.07
TSC2-211ENST00000467949 RRP7BPQ9NSQ0 103 aa21.72■■□□□ 1.07
TSC2-211ENST00000467949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.71■■□□□ 1.079e-7■□□□□ 8.9
TSC2-211ENST00000467949 TMEM2Q9UHN6 1383 aa21.71■■□□□ 1.07
TSC2-211ENST00000467949 LMTK2Q8IWU2 1503 aa21.7■■□□□ 1.06
TSC2-211ENST00000467949 FGD6Q6ZV73 1430 aa21.69■■□□□ 1.06
TSC2-211ENST00000467949 ROBO1Q9Y6N7 1651 aa21.69■■□□□ 1.06
TSC2-211ENST00000467949 MYO5BQ9ULV0 1848 aa21.69■■□□□ 1.06
TSC2-211ENST00000467949 ADGRB3O60242 1522 aa21.68■■□□□ 1.06
TSC2-211ENST00000467949 KANK1Q14678 1352 aa21.67■■□□□ 1.06
TSC2-211ENST00000467949 EID1Q9Y6B2 187 aa21.67■■□□□ 1.06
TSC2-211ENST00000467949 TET3O43151 1660 aa21.66■■□□□ 1.06
TSC2-211ENST00000467949 NWD1Q149M9 1564 aa21.65■■□□□ 1.06
TSC2-211ENST00000467949 STAG3Q9UJ98 1225 aa21.64■■□□□ 1.05
TSC2-211ENST00000467949 TMEM94Q12767 1356 aa21.63■■□□□ 1.05
TSC2-211ENST00000467949 GCC2Q8IWJ2 1684 aa21.63■■□□□ 1.05
TSC2-211ENST00000467949 ANKRD30AQ9BXX3 1397 aa21.61■■□□□ 1.05
TSC2-211ENST00000467949 RGS17Q9UGC6 210 aaPredicted RBP21.61■■□□□ 1.05
TSC2-211ENST00000467949 CHIC2Q9UKJ5 165 aa21.61■■□□□ 1.05
TSC2-211ENST00000467949 NOS1P29475 1434 aa21.61■■□□□ 1.05
TSC2-211ENST00000467949 FAM135BQ49AJ0 1406 aa21.61■■□□□ 1.05
TSC2-211ENST00000467949 IDI1Q13907 227 aa21.6■■□□□ 1.05
TSC2-211ENST00000467949 NKTRP30414 1462 aaKnown RBP21.59■■□□□ 1.05
TSC2-211ENST00000467949 SLC26A8Q96RN1 970 aa21.58■■□□□ 1.05
TSC2-211ENST00000467949 ADGRL2O95490 1459 aa21.58■■□□□ 1.04
TSC2-211ENST00000467949 RBM33Q96EV2 1170 aaKnown RBP21.57■■□□□ 1.04
TSC2-211ENST00000467949 PHLPP1O60346 1717 aa21.57■■□□□ 1.04
TSC2-211ENST00000467949 CHD2O14647 1828 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms