RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 CARMIL2Q6F5E8 1435 aa12.09□□□□□ -0.47
LCA5-203ENST00000467898 FBLN2P98095 1184 aa12.08□□□□□ -0.48
LCA5-203ENST00000467898 PLPPR3Q6T4P5 718 aa12.08□□□□□ -0.48
LCA5-203ENST00000467898 SHROOM2Q13796 1616 aa12.08□□□□□ -0.48
LCA5-203ENST00000467898 B4GALNT3Q6L9W6 998 aa12.08□□□□□ -0.48
LCA5-203ENST00000467898 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
LCA5-203ENST00000467898 AKNAQ7Z591 1439 aa12.06□□□□□ -0.48
LCA5-203ENST00000467898 MTERF4Q7Z6M4 381 aaKnown RBP12.06□□□□□ -0.48
LCA5-203ENST00000467898 KIF14Q15058 1648 aa12.06□□□□□ -0.48
LCA5-203ENST00000467898 ARID3CA6NKF2 412 aa12.06□□□□□ -0.48
LCA5-203ENST00000467898 TROQ12816 1431 aaPredicted RBP12.05□□□□□ -0.48
LCA5-203ENST00000467898 ANP32CO43423 234 aa12.05□□□□□ -0.48
LCA5-203ENST00000467898 KDM6BO15054 1643 aa12.05□□□□□ -0.48
LCA5-203ENST00000467898 DNMT1P26358 1616 aaKnown RBP12.05□□□□□ -0.48
LCA5-203ENST00000467898 ANP32BQ92688 251 aaKnown RBP12.05□□□□□ -0.48
LCA5-203ENST00000467898 PRG4Q92954 1404 aaPredicted RBP12.05□□□□□ -0.48
LCA5-203ENST00000467898 IRX6P78412 446 aaPredicted RBP12.04□□□□□ -0.48
LCA5-203ENST00000467898 SECISBP2LQ93073 1101 aaKnown RBP12.04□□□□□ -0.48
LCA5-203ENST00000467898 TMEM51Q9NW97 253 aa12.04□□□□□ -0.48
LCA5-203ENST00000467898 UACAQ9BZF9 1416 aa12.04□□□□□ -0.48
LCA5-203ENST00000467898 TAF3Q5VWG9 929 aa12.04□□□□□ -0.48
LCA5-203ENST00000467898 ITSN2Q9NZM3 1697 aa12.04□□□□□ -0.48
LCA5-203ENST00000467898 TERF1P54274 439 aa12.04□□□□□ -0.48
LCA5-203ENST00000467898 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
LCA5-203ENST00000467898 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
LCA5-203ENST00000467898 PPP1R15AO75807 674 aaPredicted RBP12.02□□□□□ -0.48
LCA5-203ENST00000467898 KIF20AO95235 890 aa12.02□□□□□ -0.49
LCA5-203ENST00000467898 DENND4BO75064 1496 aaPredicted RBP12.01□□□□□ -0.49
LCA5-203ENST00000467898 DMTNQ08495 405 aa12.01□□□□□ -0.49
LCA5-203ENST00000467898 DAPK1P53355 1430 aa12.01□□□□□ -0.49
LCA5-203ENST00000467898 ATP10BO94823 1461 aa12.01□□□□□ -0.49
LCA5-203ENST00000467898 TNNT2P45379 298 aaPredicted RBP12.01□□□□□ -0.49
LCA5-203ENST00000467898 C14orf37Q86TY3 774 aa12.01□□□□□ -0.49
LCA5-203ENST00000467898 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
LCA5-203ENST00000467898 CROCC2H7BZ55 1655 aa12□□□□□ -0.49
LCA5-203ENST00000467898 TCERG1O14776 1098 aaKnown RBP12□□□□□ -0.49
LCA5-203ENST00000467898 ABCC5O15440 1437 aa12□□□□□ -0.49
LCA5-203ENST00000467898 GPATCH8Q9UKJ3 1502 aaKnown RBP12□□□□□ -0.49
LCA5-203ENST00000467898 SIN3AQ96ST3 1273 aa12□□□□□ -0.49
LCA5-203ENST00000467898 MS4A1P11836 297 aa11.99□□□□□ -0.49
LCA5-203ENST00000467898 ABCC10Q5T3U5 1492 aa11.99□□□□□ -0.49
LCA5-203ENST00000467898 ZNF830Q96NB3 372 aaPredicted RBP11.98□□□□□ -0.49
LCA5-203ENST00000467898 CLASP1Q7Z460 1538 aa11.98□□□□□ -0.49
LCA5-203ENST00000467898 CAMSAP2Q08AD1 1489 aa11.98□□□□□ -0.49
LCA5-203ENST00000467898 ROCK1Q13464 1354 aa11.98□□□□□ -0.49
LCA5-203ENST00000467898 ERCC6L2Q5T890 1561 aa11.98□□□□□ -0.49
LCA5-203ENST00000467898 PPP4R3BQ5MIZ7 849 aa11.97□□□□□ -0.49
LCA5-203ENST00000467898 ADGBQ8N7X0 1667 aa11.97□□□□□ -0.49
LCA5-203ENST00000467898 ZNF644Q9H582 1327 aaPredicted RBP11.97□□□□□ -0.49
LCA5-203ENST00000467898 CDK11BP21127 795 aaKnown RBP11.97□□□□□ -0.49
LCA5-203ENST00000467898 KDM5BQ9UGL1 1544 aa11.96□□□□□ -0.5
LCA5-203ENST00000467898 RGS22Q8NE09 1264 aa11.96□□□□□ -0.5
LCA5-203ENST00000467898 HNRNPUQ00839 825 aaKnown RBP eCLIP11.95□□□□□ -0.5
LCA5-203ENST00000467898 RRP7BPQ9NSQ0 103 aa11.95□□□□□ -0.5
LCA5-203ENST00000467898 CHIC2Q9UKJ5 165 aa11.95□□□□□ -0.5
LCA5-203ENST00000467898 PTPRGP23470 1445 aa11.94□□□□□ -0.5
LCA5-203ENST00000467898 IRX3P78415 501 aaPredicted RBP11.94□□□□□ -0.5
LCA5-203ENST00000467898 GTPBP4Q9BZE4 634 aaKnown RBP11.94□□□□□ -0.5
LCA5-203ENST00000467898 LETM1O95202 739 aaPredicted RBP11.93□□□□□ -0.5
LCA5-203ENST00000467898 DDX10Q13206 875 aaKnown RBP11.93□□□□□ -0.5
LCA5-203ENST00000467898 BACH2Q9BYV9 841 aa11.93□□□□□ -0.5
LCA5-203ENST00000467898 ADGRL2O95490 1459 aa11.93□□□□□ -0.5
LCA5-203ENST00000467898 MMP14P50281 582 aa11.93□□□□□ -0.5
LCA5-203ENST00000467898 SLC20A2Q08357 652 aa11.93□□□□□ -0.5
LCA5-203ENST00000467898 ZHX1Q9UKY1 873 aaPredicted RBP11.92□□□□□ -0.5
LCA5-203ENST00000467898 CLGNO14967 610 aa11.92□□□□□ -0.5
LCA5-203ENST00000467898 CDC42BPBQ9Y5S2 1711 aa11.91□□□□□ -0.5
LCA5-203ENST00000467898 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
LCA5-203ENST00000467898 PREX2Q70Z35 1606 aa11.9□□□□□ -0.5
LCA5-203ENST00000467898 GOLGA6L3A6NEY3 463 aa11.9□□□□□ -0.5
LCA5-203ENST00000467898 AMER1Q5JTC6 1135 aaPredicted RBP11.9□□□□□ -0.5
LCA5-203ENST00000467898 ABCC2Q92887 1545 aa11.9□□□□□ -0.5
LCA5-203ENST00000467898 PDE4AP27815 886 aa11.9□□□□□ -0.5
LCA5-203ENST00000467898 FOXD1Q16676 465 aa11.9□□□□□ -0.5
LCA5-203ENST00000467898 ESPNB1AK53 854 aa11.89□□□□□ -0.51
LCA5-203ENST00000467898 CFDP1Q9UEE9 299 aaPredicted RBP11.89□□□□□ -0.51
LCA5-203ENST00000467898 NCOA1Q15788 1441 aa11.89□□□□□ -0.51
LCA5-203ENST00000467898 PLCD3Q8N3E9 789 aa11.89□□□□□ -0.51
LCA5-203ENST00000467898 TRIM44Q96DX7 344 aaPredicted RBP11.89□□□□□ -0.51
LCA5-203ENST00000467898 ZBED9Q6R2W3 1325 aa11.88□□□□□ -0.51
LCA5-203ENST00000467898 PLEKHD1A6NEE1 506 aa11.88□□□□□ -0.51
LCA5-203ENST00000467898 AXDND1Q5T1B0 1012 aaPredicted RBP11.88□□□□□ -0.51
LCA5-203ENST00000467898 ARID3AQ99856 593 aa11.88□□□□□ -0.51
LCA5-203ENST00000467898 SHANK2Q9UPX8 1470 aa11.88□□□□□ -0.51
LCA5-203ENST00000467898 ARHGEF5Q12774 1597 aa11.87□□□□□ -0.51
LCA5-203ENST00000467898 SAMD9LQ8IVG5 1584 aa11.87□□□□□ -0.51
LCA5-203ENST00000467898 TTC37Q6PGP7 1564 aa11.87□□□□□ -0.51
LCA5-203ENST00000467898 CNPY4Q8N129 248 aa11.87□□□□□ -0.51
LCA5-203ENST00000467898 ISY1Q9ULR0 285 aaKnown RBP11.86□□□□□ -0.51
LCA5-203ENST00000467898 FSD2A1L4K1 749 aa11.85□□□□□ -0.51
LCA5-203ENST00000467898 FRAT2O75474 233 aaPredicted RBP11.85□□□□□ -0.51
LCA5-203ENST00000467898 ZSCAN20P17040 1043 aaPredicted RBP11.85□□□□□ -0.51
LCA5-203ENST00000467898 PTMSP20962 102 aa11.85□□□□□ -0.51
LCA5-203ENST00000467898 PZPP20742 1482 aa11.85□□□□□ -0.51
LCA5-203ENST00000467898 ZCCHC11Q5TAX3 1644 aaKnown RBP11.85□□□□□ -0.51
LCA5-203ENST00000467898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.85□□□□□ -0.51
LCA5-203ENST00000467898 PTMAP06454 111 aaKnown RBP11.85□□□□□ -0.51
LCA5-203ENST00000467898 MPHOSPH9Q99550 1183 aa11.85□□□□□ -0.51
LCA5-203ENST00000467898 MBD5Q9P267 1494 aa11.85□□□□□ -0.51
LCA5-203ENST00000467898 UHRF1BP1LA0JNW5 1464 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms