RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 FAM135BQ49AJ0 1406 aa19.78■□□□□ 0.76
VPS26A-204ENST00000467852 CSRNP3Q8WYN3 585 aa19.78■□□□□ 0.76
VPS26A-204ENST00000467852 SAMD9LQ8IVG5 1584 aa19.78■□□□□ 0.76
VPS26A-204ENST00000467852 PREX2Q70Z35 1606 aa19.76■□□□□ 0.75
VPS26A-204ENST00000467852 TRIM52Q96A61 297 aa19.76■□□□□ 0.75
VPS26A-204ENST00000467852 A2MP01023 1474 aa19.75■□□□□ 0.75
VPS26A-204ENST00000467852 FAM135AQ9P2D6 1515 aa19.73■□□□□ 0.75
VPS26A-204ENST00000467852 FBXO31Q5XUX0 539 aaPredicted RBP19.73■□□□□ 0.75
VPS26A-204ENST00000467852 PLXNC1O60486 1568 aa19.73■□□□□ 0.75
VPS26A-204ENST00000467852 UGGT1Q9NYU2 1555 aa19.71■□□□□ 0.75
VPS26A-204ENST00000467852 ZNF772Q68DY9 489 aaPredicted RBP19.71■□□□□ 0.75
VPS26A-204ENST00000467852 ZNF777Q9ULD5 760 aaPredicted RBP19.7■□□□□ 0.74
VPS26A-204ENST00000467852 ATP7AQ04656 1500 aa19.7■□□□□ 0.74
VPS26A-204ENST00000467852 FMN1Q68DA7 1419 aa19.69■□□□□ 0.74
VPS26A-204ENST00000467852 NLRP1Q9C000 1473 aa19.67■□□□□ 0.74
VPS26A-204ENST00000467852 XIRP1Q702N8 1843 aaKnown RBP19.67■□□□□ 0.74
VPS26A-204ENST00000467852 HNRNPMP52272 730 aaKnown RBP eCLIP19.66■□□□□ 0.742e-7■■■■■ 29.2
VPS26A-204ENST00000467852 PZPP20742 1482 aa19.65■□□□□ 0.74
VPS26A-204ENST00000467852 ROBO1Q9Y6N7 1651 aa19.65■□□□□ 0.74
VPS26A-204ENST00000467852 RXRBP28702 533 aa19.64■□□□□ 0.73
VPS26A-204ENST00000467852 JCADQ9P266 1359 aa19.64■□□□□ 0.73
VPS26A-204ENST00000467852 MIA2Q96PC5 1412 aa19.64■□□□□ 0.73
VPS26A-204ENST00000467852 CDC42BPAQ5VT25 1732 aa19.64■□□□□ 0.73
VPS26A-204ENST00000467852 SYCP2Q9BX26 1530 aa19.63■□□□□ 0.73
VPS26A-204ENST00000467852 MEX3CQ5U5Q3 659 aaKnown RBP19.63■□□□□ 0.73
VPS26A-204ENST00000467852 ADGBQ8N7X0 1667 aa19.62■□□□□ 0.73
VPS26A-204ENST00000467852 INO80Q9ULG1 1556 aaPredicted RBP19.61■□□□□ 0.73
VPS26A-204ENST00000467852 KDM5DQ9BY66 1539 aa19.59■□□□□ 0.73
VPS26A-204ENST00000467852 ZC3H13Q5T200 1668 aaKnown RBP19.59■□□□□ 0.73
VPS26A-204ENST00000467852 PHLPP1O60346 1717 aa19.58■□□□□ 0.72
VPS26A-204ENST00000467852 WASHC2CQ9Y4E1 1318 aa19.56■□□□□ 0.72
VPS26A-204ENST00000467852 CDK12Q9NYV4 1490 aaPredicted RBP19.56■□□□□ 0.72
VPS26A-204ENST00000467852 ZRANB1Q9UGI0 708 aa19.56■□□□□ 0.72
VPS26A-204ENST00000467852 LRRIQ1Q96JM4 1722 aa19.55■□□□□ 0.72
VPS26A-204ENST00000467852 LRRC9Q6ZRR7 1453 aa19.54■□□□□ 0.72
VPS26A-204ENST00000467852 KIAA1107Q9UPP5 1409 aa19.54■□□□□ 0.72
VPS26A-204ENST00000467852 SPATA31A6Q5VVP1 1343 aa19.53■□□□□ 0.72
VPS26A-204ENST00000467852 PLEKHH2Q8IVE3 1493 aa19.53■□□□□ 0.72
VPS26A-204ENST00000467852 KIF3BO15066 747 aa19.52■□□□□ 0.72
VPS26A-204ENST00000467852 TMEM94Q12767 1356 aa19.52■□□□□ 0.72
VPS26A-204ENST00000467852 SCAF11Q99590 1463 aaKnown RBP19.5■□□□□ 0.71
VPS26A-204ENST00000467852 DHX29Q7Z478 1369 aaKnown RBP19.5■□□□□ 0.71
VPS26A-204ENST00000467852 LRP6O75581 1613 aa19.49■□□□□ 0.71
VPS26A-204ENST00000467852 TXNDC2Q86VQ3 553 aa19.48■□□□□ 0.71
VPS26A-204ENST00000467852 PROSER2Q86WR7 435 aaPredicted RBP19.47■□□□□ 0.71
VPS26A-204ENST00000467852 SLAIN2Q9P270 581 aa19.47■□□□□ 0.71
VPS26A-204ENST00000467852 CFDP1Q9UEE9 299 aaPredicted RBP19.46■□□□□ 0.71
VPS26A-204ENST00000467852 GPATCH8Q9UKJ3 1502 aaKnown RBP19.46■□□□□ 0.71
VPS26A-204ENST00000467852 NUTM2BA6NNL0 878 aaPredicted RBP19.45■□□□□ 0.7
VPS26A-204ENST00000467852 NUTM2EB1AL46 878 aaPredicted RBP19.45■□□□□ 0.7
VPS26A-204ENST00000467852 NUTM2DQ5VT03 806 aaPredicted RBP19.45■□□□□ 0.7
VPS26A-204ENST00000467852 NUTM2AQ8IVF1 878 aaPredicted RBP19.45■□□□□ 0.7
VPS26A-204ENST00000467852 FGD6Q6ZV73 1430 aa19.44■□□□□ 0.7
VPS26A-204ENST00000467852 CCDC18Q5T9S5 1454 aa19.44■□□□□ 0.7
VPS26A-204ENST00000467852 LTKP29376 864 aa19.44■□□□□ 0.7
VPS26A-204ENST00000467852 EEA1Q15075 1411 aa19.43■□□□□ 0.7
VPS26A-204ENST00000467852 EID1Q9Y6B2 187 aa19.43■□□□□ 0.7
VPS26A-204ENST00000467852 ARHGAP35Q9NRY4 1499 aa19.42■□□□□ 0.7
VPS26A-204ENST00000467852 KCNA6P17658 529 aa19.42■□□□□ 0.7
VPS26A-204ENST00000467852 COL16A1Q07092 1604 aaPredicted RBP19.42■□□□□ 0.7
VPS26A-204ENST00000467852 SETBP1Q9Y6X0 1596 aa19.41■□□□□ 0.7
VPS26A-204ENST00000467852 RBM33Q96EV2 1170 aaKnown RBP19.41■□□□□ 0.7
VPS26A-204ENST00000467852 MSH6P52701 1360 aa19.41■□□□□ 0.7
VPS26A-204ENST00000467852 RTEL1-TNFRSF6BF6WH68 1400 aa19.41■□□□□ 0.7
VPS26A-204ENST00000467852 MAP3K1Q13233 1512 aa19.41■□□□□ 0.7
VPS26A-204ENST00000467852 UBR1Q8IWV7 1749 aa19.4■□□□□ 0.7
VPS26A-204ENST00000467852 RGS12O14924 1447 aa19.37■□□□□ 0.69
VPS26A-204ENST00000467852 AFF2P51816 1311 aa19.37■□□□□ 0.69
VPS26A-204ENST00000467852 RBM6P78332 1123 aaKnown RBP19.37■□□□□ 0.69
VPS26A-204ENST00000467852 CFAP65Q6ZU64 1925 aaKnown RBP19.37■□□□□ 0.69
VPS26A-204ENST00000467852 ATAD2Q6PL18 1390 aa19.36■□□□□ 0.69
VPS26A-204ENST00000467852 UBTFP17480 764 aaKnown RBP19.36■□□□□ 0.69
VPS26A-204ENST00000467852 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
VPS26A-204ENST00000467852 SLIT1O75093 1534 aa19.35■□□□□ 0.69
VPS26A-204ENST00000467852 ARHGAP23Q9P227 1491 aa19.35■□□□□ 0.69
VPS26A-204ENST00000467852 CCNB3Q8WWL7 1395 aa19.34■□□□□ 0.69
VPS26A-204ENST00000467852 QTRT2Q9H974 415 aaKnown RBP19.34■□□□□ 0.69
VPS26A-204ENST00000467852 PRDM15P57071 1507 aaPredicted RBP19.34■□□□□ 0.69
VPS26A-204ENST00000467852 ERVK-7P63135 1459 aa19.33■□□□□ 0.68
VPS26A-204ENST00000467852 NCOA2Q15596 1464 aa19.32■□□□□ 0.68
VPS26A-204ENST00000467852 TIAM1Q13009 1591 aa19.32■□□□□ 0.68
VPS26A-204ENST00000467852 CASKIN1Q8WXD9 1431 aa19.31■□□□□ 0.68
VPS26A-204ENST00000467852 ABCC3O15438 1527 aa19.3■□□□□ 0.68
VPS26A-204ENST00000467852 NGLY1Q96IV0 654 aa19.29■□□□□ 0.68
VPS26A-204ENST00000467852 NKTRP30414 1462 aaKnown RBP19.28■□□□□ 0.68
VPS26A-204ENST00000467852 MBD5Q9P267 1494 aa19.28■□□□□ 0.68
VPS26A-204ENST00000467852 ZNF644Q9H582 1327 aaPredicted RBP19.27■□□□□ 0.68
VPS26A-204ENST00000467852 CCDC125Q86Z20 511 aa19.27■□□□□ 0.68
VPS26A-204ENST00000467852 EHMT2Q96KQ7 1210 aa19.27■□□□□ 0.68
VPS26A-204ENST00000467852 SLC26A8Q96RN1 970 aa19.27■□□□□ 0.68
VPS26A-204ENST00000467852 STAG3Q9UJ98 1225 aa19.25■□□□□ 0.67
VPS26A-204ENST00000467852 AHDC1Q5TGY3 1603 aaPredicted RBP19.25■□□□□ 0.67
VPS26A-204ENST00000467852 TMEM2Q9UHN6 1383 aa19.24■□□□□ 0.67
VPS26A-204ENST00000467852 PPP4R3CPQ6ZMV5 832 aa19.24■□□□□ 0.67
VPS26A-204ENST00000467852 C8orf37Q96NL8 207 aa19.23■□□□□ 0.67
VPS26A-204ENST00000467852 KDM5AP29375 1690 aaKnown RBP19.23■□□□□ 0.67
VPS26A-204ENST00000467852 NWD1Q149M9 1564 aa19.21■□□□□ 0.67
VPS26A-204ENST00000467852 RSPH4AQ5TD94 716 aa19.19■□□□□ 0.66
VPS26A-204ENST00000467852 C14orf37Q86TY3 774 aa19.19■□□□□ 0.66
VPS26A-204ENST00000467852 BCANQ96GW7 911 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms