RNA–Protein interactions for RNA: ENST00000467824.1

SYN3-209, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-209ENST00000467824 MAST1Q9Y2H9 1570 aa15.2■□□□□ 0.02
SYN3-209ENST00000467824 CAMSAP1Q5T5Y3 1602 aa15.19■□□□□ 0.02
SYN3-209ENST00000467824 MYO3AQ8NEV4 1616 aa15.18■□□□□ 0.02
SYN3-209ENST00000467824 PLA2R1Q13018 1463 aa15.18■□□□□ 0.02
SYN3-209ENST00000467824 CEP170BQ9Y4F5 1589 aaPredicted RBP15.18■□□□□ 0.02
SYN3-209ENST00000467824 ZNF142P52746 1687 aaPredicted RBP15.17■□□□□ 0.02
SYN3-209ENST00000467824 PZPP20742 1482 aa15.17■□□□□ 0.02
SYN3-209ENST00000467824 PKD2Q13563 968 aa15.17■□□□□ 0.02
SYN3-209ENST00000467824 A2ML1A8K2U0 1454 aa15.16■□□□□ 0.02
SYN3-209ENST00000467824 TNRQ92752 1358 aa15.16■□□□□ 0.02
SYN3-209ENST00000467824 SHANK2Q9UPX8 1470 aa15.15■□□□□ 0.02
SYN3-209ENST00000467824 FGD6Q6ZV73 1430 aa15.14■□□□□ 0.01
SYN3-209ENST00000467824 NCKAP5LQ9HCH0 1330 aa15.14■□□□□ 0.01
SYN3-209ENST00000467824 LTBP4Q8N2S1 1624 aa15.14■□□□□ 0.01
SYN3-209ENST00000467824 DUOX2Q9NRD8 1548 aa15.13■□□□□ 0.01
SYN3-209ENST00000467824 FBXO31Q5XUX0 539 aaPredicted RBP15.13■□□□□ 0.01
SYN3-209ENST00000467824 RNF17Q9BXT8 1623 aaKnown RBP15.13■□□□□ 0.01
SYN3-209ENST00000467824 EIF2AK4Q9P2K8 1649 aaKnown RBP15.13■□□□□ 0.01
SYN3-209ENST00000467824 TCOF1Q13428 1488 aaKnown RBP15.13■□□□□ 0.01
SYN3-209ENST00000467824 KIF15Q9NS87 1388 aa15.12■□□□□ 0.01
SYN3-209ENST00000467824 DISP3Q9P2K9 1392 aa15.12■□□□□ 0.01
SYN3-209ENST00000467824 ABCC5O15440 1437 aa15.11■□□□□ 0.01
SYN3-209ENST00000467824 PTPN23Q9H3S7 1636 aa15.11■□□□□ 0.01
SYN3-209ENST00000467824 NLRP1Q9C000 1473 aa15.11■□□□□ 0.01
SYN3-209ENST00000467824 SPATA31D1Q6ZQQ2 1576 aa15.11■□□□□ 0.01
SYN3-209ENST00000467824 DAPK1P53355 1430 aa15.1■□□□□ 0.01
SYN3-209ENST00000467824 ERBINQ96RT1 1412 aa15.1■□□□□ 0.01
SYN3-209ENST00000467824 ABCC3O15438 1527 aa15.1■□□□□ 0.01
SYN3-209ENST00000467824 ZC3H13Q5T200 1668 aaKnown RBP15.09■□□□□ 0.01
SYN3-209ENST00000467824 IQSEC2Q5JU85 1478 aa15.08■□□□□ 0.01
SYN3-209ENST00000467824 DNMT1P26358 1616 aaKnown RBP15.08■□□□□ 0
SYN3-209ENST00000467824 THEMISQ8N1K5 641 aaPredicted RBP15.08■□□□□ 0
SYN3-209ENST00000467824 RRP7BPQ9NSQ0 103 aa15.08■□□□□ 0
SYN3-209ENST00000467824 ANKRD30AQ9BXX3 1397 aa15.08■□□□□ 0
SYN3-209ENST00000467824 CROCC2H7BZ55 1655 aa15.06■□□□□ 0
SYN3-209ENST00000467824 ILDR2Q71H61 639 aa15.06■□□□□ 0
SYN3-209ENST00000467824 ANKLE2Q86XL3 938 aa15.05■□□□□ -0
SYN3-209ENST00000467824 ZNF335Q9H4Z2 1342 aaPredicted RBP15.05■□□□□ -0
SYN3-209ENST00000467824 KANK1Q14678 1352 aa15.05■□□□□ -0
SYN3-209ENST00000467824 PRDM15P57071 1507 aaPredicted RBP15.05■□□□□ -0
SYN3-209ENST00000467824 UGGT1Q9NYU2 1555 aa15.05■□□□□ -0
SYN3-209ENST00000467824 MROH1Q8NDA8 1641 aa15.05■□□□□ -0
SYN3-209ENST00000467824 ERVK-7P63135 1459 aa15.04■□□□□ -0
SYN3-209ENST00000467824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.03■□□□□ -0
SYN3-209ENST00000467824 ARHGAP31Q2M1Z3 1444 aa15.02■□□□□ -0
SYN3-209ENST00000467824 FAM50AQ14320 339 aaKnown RBP15.02■□□□□ -0
SYN3-209ENST00000467824 CHIC2Q9UKJ5 165 aa15.02■□□□□ -0
SYN3-209ENST00000467824 POLR1AO95602 1720 aaPredicted RBP15.01□□□□□ -0.01
SYN3-209ENST00000467824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.01
SYN3-209ENST00000467824 NEURL4Q96JN8 1562 aa14.99□□□□□ -0.01
SYN3-209ENST00000467824 ADGRL2O95490 1459 aa14.99□□□□□ -0.01
SYN3-209ENST00000467824 NPHP4O75161 1426 aaPredicted RBP14.99□□□□□ -0.01
SYN3-209ENST00000467824 MED14O60244 1454 aa14.98□□□□□ -0.01
SYN3-209ENST00000467824 DEPDC5O75140 1603 aa14.98□□□□□ -0.01
SYN3-209ENST00000467824 CEP152O94986 1710 aa14.97□□□□□ -0.01
SYN3-209ENST00000467824 UBAP1LF5GYI3 381 aa14.97□□□□□ -0.01
SYN3-209ENST00000467824 CPS1P31327 1500 aa14.97□□□□□ -0.01
SYN3-209ENST00000467824 LMTK2Q8IWU2 1503 aa14.96□□□□□ -0.02
SYN3-209ENST00000467824 ANKRD50Q9ULJ7 1429 aa14.94□□□□□ -0.02
SYN3-209ENST00000467824 VWDEQ8N2E2 1590 aa14.94□□□□□ -0.02
SYN3-209ENST00000467824 SOCS7O14512 581 aa14.93□□□□□ -0.02
SYN3-209ENST00000467824 STAG3Q9UJ98 1225 aa14.92□□□□□ -0.02
SYN3-209ENST00000467824 EID1Q9Y6B2 187 aa14.92□□□□□ -0.02
SYN3-209ENST00000467824 SCAF11Q99590 1463 aaKnown RBP14.92□□□□□ -0.02
SYN3-209ENST00000467824 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
SYN3-209ENST00000467824 EFCAB6Q5THR3 1501 aa14.91□□□□□ -0.02
SYN3-209ENST00000467824 IQGAP1P46940 1657 aa14.9□□□□□ -0.02
SYN3-209ENST00000467824 ARHGAP23Q9P227 1491 aa14.9□□□□□ -0.02
SYN3-209ENST00000467824 ROCK1Q13464 1354 aa14.9□□□□□ -0.02
SYN3-209ENST00000467824 TXNDC2Q86VQ3 553 aa14.9□□□□□ -0.02
SYN3-209ENST00000467824 SLIT1O75093 1534 aa14.9□□□□□ -0.02
SYN3-209ENST00000467824 UBR1Q8IWV7 1749 aa14.89□□□□□ -0.03
SYN3-209ENST00000467824 RPRD2Q5VT52 1461 aaKnown RBP14.89□□□□□ -0.03
SYN3-209ENST00000467824 TMEM2Q9UHN6 1383 aa14.88□□□□□ -0.03
SYN3-209ENST00000467824 TOM1O60784 492 aa14.88□□□□□ -0.03
SYN3-209ENST00000467824 NOS1P29475 1434 aa14.88□□□□□ -0.03
SYN3-209ENST00000467824 PIP4K2BP78356 416 aa14.87□□□□□ -0.03
SYN3-209ENST00000467824 SLC52A1Q9NWF4 448 aa14.87□□□□□ -0.03
SYN3-209ENST00000467824 LTKP29376 864 aa14.86□□□□□ -0.03
SYN3-209ENST00000467824 IDI1Q13907 227 aa14.86□□□□□ -0.03
SYN3-209ENST00000467824 PIK3C2BO00750 1634 aa14.85□□□□□ -0.03
SYN3-209ENST00000467824 KDM5AP29375 1690 aaKnown RBP14.84□□□□□ -0.03
SYN3-209ENST00000467824 SYNMO15061 1565 aa14.84□□□□□ -0.03
SYN3-209ENST00000467824 MED1Q15648 1581 aaPredicted RBP14.84□□□□□ -0.03
SYN3-209ENST00000467824 CFAP65Q6ZU64 1925 aaKnown RBP14.84□□□□□ -0.03
SYN3-209ENST00000467824 ADGRB3O60242 1522 aa14.83□□□□□ -0.04
SYN3-209ENST00000467824 HSPA1LP34931 641 aa14.83□□□□□ -0.04
SYN3-209ENST00000467824 STRCP1A6NGW2 1772 aa14.83□□□□□ -0.04
SYN3-209ENST00000467824 UNC13BO14795 1591 aa14.82□□□□□ -0.04
SYN3-209ENST00000467824 ITGAEP38570 1179 aa14.82□□□□□ -0.04
SYN3-209ENST00000467824 SENP3Q9H4L4 574 aaPredicted RBP14.82□□□□□ -0.04
SYN3-209ENST00000467824 LRRC7Q96NW7 1537 aa14.82□□□□□ -0.04
SYN3-209ENST00000467824 TET3O43151 1660 aa14.81□□□□□ -0.04
SYN3-209ENST00000467824 PPARGC1BQ86YN6 1023 aaKnown RBP14.81□□□□□ -0.04
SYN3-209ENST00000467824 ALKQ9UM73 1620 aa14.8□□□□□ -0.04
SYN3-209ENST00000467824 HDGFP51858 240 aaKnown RBP14.79□□□□□ -0.04
SYN3-209ENST00000467824 NUP155O75694 1391 aa14.78□□□□□ -0.04
SYN3-209ENST00000467824 GCC2Q8IWJ2 1684 aa14.77□□□□□ -0.05
SYN3-209ENST00000467824 PPP1R15AO75807 674 aaPredicted RBP14.76□□□□□ -0.05
SYN3-209ENST00000467824 BCANQ96GW7 911 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms