RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 MAST1Q9Y2H9 1570 aa23.27■■□□□ 1.32
ATPAF2-204ENST00000467560 CEP170BQ9Y4F5 1589 aaPredicted RBP23.25■■□□□ 1.31
ATPAF2-204ENST00000467560 KDM5DQ9BY66 1539 aa23.24■■□□□ 1.31
ATPAF2-204ENST00000467560 ZNF142P52746 1687 aaPredicted RBP23.24■■□□□ 1.31
ATPAF2-204ENST00000467560 WASHC2CQ9Y4E1 1318 aa23.24■■□□□ 1.31
ATPAF2-204ENST00000467560 APLP2Q06481 763 aa23.21■■□□□ 1.31
ATPAF2-204ENST00000467560 PZPP20742 1482 aa23.21■■□□□ 1.31
ATPAF2-204ENST00000467560 ABCC5O15440 1437 aa23.2■■□□□ 1.3
ATPAF2-204ENST00000467560 LTBP4Q8N2S1 1624 aa23.19■■□□□ 1.3
ATPAF2-204ENST00000467560 A2ML1A8K2U0 1454 aa23.18■■□□□ 1.3
ATPAF2-204ENST00000467560 TCOF1Q13428 1488 aaKnown RBP23.18■■□□□ 1.3
ATPAF2-204ENST00000467560 TNRQ92752 1358 aa23.18■■□□□ 1.3
ATPAF2-204ENST00000467560 RNF17Q9BXT8 1623 aaKnown RBP23.18■■□□□ 1.3
ATPAF2-204ENST00000467560 FAM135AQ9P2D6 1515 aa23.18■■□□□ 1.3
ATPAF2-204ENST00000467560 PLA2R1Q13018 1463 aa23.17■■□□□ 1.3
ATPAF2-204ENST00000467560 PTPN23Q9H3S7 1636 aa23.17■■□□□ 1.3
ATPAF2-204ENST00000467560 DNMT1P26358 1616 aaKnown RBP23.16■■□□□ 1.3
ATPAF2-204ENST00000467560 MROH1Q8NDA8 1641 aa23.16■■□□□ 1.3
ATPAF2-204ENST00000467560 ABCC3O15438 1527 aa23.16■■□□□ 1.3
ATPAF2-204ENST00000467560 FGD6Q6ZV73 1430 aa23.16■■□□□ 1.3
ATPAF2-204ENST00000467560 PKD2Q13563 968 aa23.13■■□□□ 1.29
ATPAF2-204ENST00000467560 ZNF335Q9H4Z2 1342 aaPredicted RBP23.12■■□□□ 1.29
ATPAF2-204ENST00000467560 SHANK2Q9UPX8 1470 aa23.12■■□□□ 1.29
ATPAF2-204ENST00000467560 EIF2AK4Q9P2K8 1649 aaKnown RBP23.12■■□□□ 1.29
ATPAF2-204ENST00000467560 DAPK1P53355 1430 aa23.12■■□□□ 1.29
ATPAF2-204ENST00000467560 RRP7BPQ9NSQ0 103 aa23.12■■□□□ 1.29
ATPAF2-204ENST00000467560 DUOX2Q9NRD8 1548 aa23.12■■□□□ 1.29
ATPAF2-204ENST00000467560 KIF15Q9NS87 1388 aa23.12■■□□□ 1.29
ATPAF2-204ENST00000467560 CROCC2H7BZ55 1655 aa23.11■■□□□ 1.29
ATPAF2-204ENST00000467560 CHIC2Q9UKJ5 165 aa23.07■■□□□ 1.28
ATPAF2-204ENST00000467560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.06■■□□□ 1.28
ATPAF2-204ENST00000467560 NEURL4Q96JN8 1562 aa23.06■■□□□ 1.28
ATPAF2-204ENST00000467560 ZC3H13Q5T200 1668 aaKnown RBP23.05■■□□□ 1.28
ATPAF2-204ENST00000467560 NLRP1Q9C000 1473 aa23.05■■□□□ 1.28
ATPAF2-204ENST00000467560 ERBINQ96RT1 1412 aa23.04■■□□□ 1.28
ATPAF2-204ENST00000467560 SPATA31D1Q6ZQQ2 1576 aa23.04■■□□□ 1.28
ATPAF2-204ENST00000467560 CEP152O94986 1710 aa23.04■■□□□ 1.28
ATPAF2-204ENST00000467560 ERVK-7P63135 1459 aa23.04■■□□□ 1.28
ATPAF2-204ENST00000467560 PRDM15P57071 1507 aaPredicted RBP23.02■■□□□ 1.28
ATPAF2-204ENST00000467560 UGGT1Q9NYU2 1555 aa23.01■■□□□ 1.27
ATPAF2-204ENST00000467560 THEMISQ8N1K5 641 aaPredicted RBP23■■□□□ 1.27
ATPAF2-204ENST00000467560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23■■□□□ 1.27
ATPAF2-204ENST00000467560 IQSEC2Q5JU85 1478 aa22.99■■□□□ 1.27
ATPAF2-204ENST00000467560 POLR1AO95602 1720 aaPredicted RBP22.99■■□□□ 1.27
ATPAF2-204ENST00000467560 ANKRD30AQ9BXX3 1397 aa22.98■■□□□ 1.27
ATPAF2-204ENST00000467560 FAM50AQ14320 339 aaKnown RBP22.97■■□□□ 1.27
ATPAF2-204ENST00000467560 ANKLE2Q86XL3 938 aa22.97■■□□□ 1.27
ATPAF2-204ENST00000467560 DEPDC5O75140 1603 aa22.97■■□□□ 1.27
ATPAF2-204ENST00000467560 ARHGAP31Q2M1Z3 1444 aa22.95■■□□□ 1.26
ATPAF2-204ENST00000467560 CFAP65Q6ZU64 1925 aaKnown RBP22.95■■□□□ 1.26
ATPAF2-204ENST00000467560 ADGRL2O95490 1459 aa22.93■■□□□ 1.26
ATPAF2-204ENST00000467560 MED14O60244 1454 aa22.92■■□□□ 1.26
ATPAF2-204ENST00000467560 NPHP4O75161 1426 aaPredicted RBP22.92■■□□□ 1.26
ATPAF2-204ENST00000467560 VWDEQ8N2E2 1590 aa22.91■■□□□ 1.26
ATPAF2-204ENST00000467560 UBR1Q8IWV7 1749 aa22.89■■□□□ 1.26
ATPAF2-204ENST00000467560 LMTK2Q8IWU2 1503 aa22.88■■□□□ 1.25
ATPAF2-204ENST00000467560 UBAP1LF5GYI3 381 aa22.88■■□□□ 1.25
ATPAF2-204ENST00000467560 PPARGC1BQ86YN6 1023 aaKnown RBP22.88■■□□□ 1.25
ATPAF2-204ENST00000467560 KANK1Q14678 1352 aa22.88■■□□□ 1.25
ATPAF2-204ENST00000467560 LTKP29376 864 aa22.86■■□□□ 1.25
ATPAF2-204ENST00000467560 IQGAP1P46940 1657 aa22.84■■□□□ 1.25
ATPAF2-204ENST00000467560 ANKRD50Q9ULJ7 1429 aa22.84■■□□□ 1.25
ATPAF2-204ENST00000467560 ARHGAP23Q9P227 1491 aa22.84■■□□□ 1.25
ATPAF2-204ENST00000467560 CPS1P31327 1500 aa22.82■■□□□ 1.24
ATPAF2-204ENST00000467560 PIK3C2BO00750 1634 aa22.82■■□□□ 1.24
ATPAF2-204ENST00000467560 EFCAB6Q5THR3 1501 aa22.82■■□□□ 1.24
ATPAF2-204ENST00000467560 SYNMO15061 1565 aa22.81■■□□□ 1.24
ATPAF2-204ENST00000467560 IDI1Q13907 227 aa22.81■■□□□ 1.24
ATPAF2-204ENST00000467560 SLIT1O75093 1534 aa22.81■■□□□ 1.24
ATPAF2-204ENST00000467560 SCAF11Q99590 1463 aaKnown RBP22.8■■□□□ 1.24
ATPAF2-204ENST00000467560 NOS1P29475 1434 aa22.8■■□□□ 1.24
ATPAF2-204ENST00000467560 STRCP1A6NGW2 1772 aa22.79■■□□□ 1.24
ATPAF2-204ENST00000467560 TXNDC2Q86VQ3 553 aa22.79■■□□□ 1.24
ATPAF2-204ENST00000467560 TMEM2Q9UHN6 1383 aa22.76■■□□□ 1.23
ATPAF2-204ENST00000467560 ALKQ9UM73 1620 aa22.75■■□□□ 1.23
ATPAF2-204ENST00000467560 ROCK1Q13464 1354 aa22.74■■□□□ 1.23
ATPAF2-204ENST00000467560 LRRC7Q96NW7 1537 aa22.73■■□□□ 1.23
ATPAF2-204ENST00000467560 ITGAEP38570 1179 aa22.73■■□□□ 1.23
ATPAF2-204ENST00000467560 STAG3Q9UJ98 1225 aa22.73■■□□□ 1.23
ATPAF2-204ENST00000467560 DISP3Q9P2K9 1392 aa22.73■■□□□ 1.23
ATPAF2-204ENST00000467560 PIP4K2BP78356 416 aa22.72■■□□□ 1.23
ATPAF2-204ENST00000467560 EID1Q9Y6B2 187 aa22.71■■□□□ 1.23
ATPAF2-204ENST00000467560 UNC13BO14795 1591 aa22.71■■□□□ 1.23
ATPAF2-204ENST00000467560 RPRD2Q5VT52 1461 aaKnown RBP22.69■■□□□ 1.22
ATPAF2-204ENST00000467560 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
ATPAF2-204ENST00000467560 TOM1O60784 492 aa22.69■■□□□ 1.22
ATPAF2-204ENST00000467560 TET3O43151 1660 aa22.68■■□□□ 1.22
ATPAF2-204ENST00000467560 KDM5AP29375 1690 aaKnown RBP22.68■■□□□ 1.22
ATPAF2-204ENST00000467560 ADGRB3O60242 1522 aa22.68■■□□□ 1.22
ATPAF2-204ENST00000467560 HSPA1LP34931 641 aa22.68■■□□□ 1.22
ATPAF2-204ENST00000467560 ILDR2Q71H61 639 aa22.68■■□□□ 1.22
ATPAF2-204ENST00000467560 SLC52A1Q9NWF4 448 aa22.67■■□□□ 1.22
ATPAF2-204ENST00000467560 SLC26A8Q96RN1 970 aa22.64■■□□□ 1.21
ATPAF2-204ENST00000467560 SENP3Q9H4L4 574 aaPredicted RBP22.63■■□□□ 1.21
ATPAF2-204ENST00000467560 E9PCH4 1651 aa22.62■■□□□ 1.21
ATPAF2-204ENST00000467560 GCC2Q8IWJ2 1684 aa22.62■■□□□ 1.21
ATPAF2-204ENST00000467560 IQGAP3Q86VI3 1631 aa22.61■■□□□ 1.21
ATPAF2-204ENST00000467560 NUP155O75694 1391 aa22.61■■□□□ 1.21
ATPAF2-204ENST00000467560 ZFYVE9O95405 1425 aa22.6■■□□□ 1.21
ATPAF2-204ENST00000467560 RRBP1Q9P2E9 1410 aaKnown RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms