RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 PHF12Q96QT6 1004 aa7.47□□□□□ -1.21
MSH2-205ENST00000467323 MDM2Q00987 491 aaPredicted RBP7.46□□□□□ -1.22
MSH2-205ENST00000467323 FBXW7Q969H0 707 aa7.46□□□□□ -1.22
MSH2-205ENST00000467323 BEGAINQ9BUH8 593 aa7.46□□□□□ -1.22
MSH2-205ENST00000467323 C2orf72A6NCS6 295 aa7.45□□□□□ -1.22
MSH2-205ENST00000467323 TIE1P35590 1138 aa7.45□□□□□ -1.22
MSH2-205ENST00000467323 PROCA1Q8NCQ7 364 aaPredicted RBP7.45□□□□□ -1.22
MSH2-205ENST00000467323 UPF1Q92900 1129 aaKnown RBP eCLIP7.45□□□□□ -1.22
MSH2-205ENST00000467323 POLR3EQ9NVU0 708 aa7.45□□□□□ -1.22
MSH2-205ENST00000467323 IRF5Q13568 498 aa7.44□□□□□ -1.22
MSH2-205ENST00000467323 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.44□□□□□ -1.22
MSH2-205ENST00000467323 KIF3CO14782 793 aa7.43□□□□□ -1.22
MSH2-205ENST00000467323 CD44P16070 742 aaKnown RBP7.43□□□□□ -1.22
MSH2-205ENST00000467323 TMEM259Q4ZIN3 620 aa7.43□□□□□ -1.22
MSH2-205ENST00000467323 PRM3Q9NNZ6 103 aa7.43□□□□□ -1.22
MSH2-205ENST00000467323 G3V3G9 751 aa7.42□□□□□ -1.22
MSH2-205ENST00000467323 RBM25P49756 843 aaKnown RBP7.42□□□□□ -1.22
MSH2-205ENST00000467323 CLK2P49760 499 aaKnown RBP7.42□□□□□ -1.22
MSH2-205ENST00000467323 DIXDC1Q155Q3 683 aa7.42□□□□□ -1.22
MSH2-205ENST00000467323 TTLL13PA6NNM8 815 aa7.41□□□□□ -1.22
MSH2-205ENST00000467323 EVI5O60447 810 aa7.41□□□□□ -1.22
MSH2-205ENST00000467323 RFC5P40937 340 aa7.41□□□□□ -1.22
MSH2-205ENST00000467323 MYSM1Q5VVJ2 828 aa7.41□□□□□ -1.22
MSH2-205ENST00000467323 DPY19L2Q6NUT2 758 aa7.41□□□□□ -1.22
MSH2-205ENST00000467323 MS4A3Q96HJ5 214 aa7.41□□□□□ -1.22
MSH2-205ENST00000467323 CALR3Q96L12 384 aaKnown RBP7.41□□□□□ -1.22
MSH2-205ENST00000467323 FAM217BQ9NTX9 383 aaPredicted RBP7.41□□□□□ -1.22
MSH2-205ENST00000467323 TRPC6Q9Y210 931 aa7.41□□□□□ -1.22
MSH2-205ENST00000467323 PRIM1P49642 420 aaKnown RBP7.4□□□□□ -1.22
MSH2-205ENST00000467323 SNRKQ9NRH2 765 aa7.4□□□□□ -1.22
MSH2-205ENST00000467323 KCNA1Q09470 495 aa7.39□□□□□ -1.23
MSH2-205ENST00000467323 FOXD4L5Q5VV16 416 aaPredicted RBP7.39□□□□□ -1.23
MSH2-205ENST00000467323 FOXD4L4Q8WXT5 416 aaPredicted RBP7.39□□□□□ -1.23
MSH2-205ENST00000467323 TMEM121BQ9BXQ6 578 aaPredicted RBP7.39□□□□□ -1.23
MSH2-205ENST00000467323 SHROOM4Q9ULL8 1493 aa7.38□□□□□ -1.23
MSH2-205ENST00000467323 E9PSI1 815 aa7.38□□□□□ -1.23
MSH2-205ENST00000467323 OATP04181 439 aa7.38□□□□□ -1.23
MSH2-205ENST00000467323 BOLA1Q9Y3E2 137 aa7.38□□□□□ -1.23
MSH2-205ENST00000467323 SOCS7O14512 581 aa7.37□□□□□ -1.23
MSH2-205ENST00000467323 EN1Q05925 392 aaPredicted RBP7.37□□□□□ -1.23
MSH2-205ENST00000467323 PHOX2BQ99453 314 aa7.37□□□□□ -1.23
MSH2-205ENST00000467323 EPAS1Q99814 870 aa7.37□□□□□ -1.23
MSH2-205ENST00000467323 TRIM35Q9UPQ4 493 aa7.37□□□□□ -1.23
MSH2-205ENST00000467323 BRD1O95696 1058 aa7.36□□□□□ -1.23
MSH2-205ENST00000467323 PPP2R2DQ66LE6 453 aa7.36□□□□□ -1.23
MSH2-205ENST00000467323 GDPD2Q9HCC8 539 aa7.36□□□□□ -1.23
MSH2-205ENST00000467323 NPDC1Q9NQX5 325 aaPredicted RBP7.36□□□□□ -1.23
MSH2-205ENST00000467323 USTQ9Y2C2 406 aa7.36□□□□□ -1.23
MSH2-205ENST00000467323 MAP3K7O43318 606 aa7.35□□□□□ -1.23
MSH2-205ENST00000467323 PDCD7Q8N8D1 485 aaKnown RBP7.35□□□□□ -1.23
MSH2-205ENST00000467323 GLMNQ92990 594 aa7.35□□□□□ -1.23
MSH2-205ENST00000467323 PBXIP1Q96AQ6 731 aa7.35□□□□□ -1.23
MSH2-205ENST00000467323 TBC1D2Q9BYX2 928 aa7.35□□□□□ -1.23
MSH2-205ENST00000467323 CDHR5Q9HBB8 845 aa7.35□□□□□ -1.23
MSH2-205ENST00000467323 PHF14O94880 888 aa7.34□□□□□ -1.23
MSH2-205ENST00000467323 ABL2P42684 1182 aa7.34□□□□□ -1.23
MSH2-205ENST00000467323 METTL3Q86U44 580 aaKnown RBP7.34□□□□□ -1.23
MSH2-205ENST00000467323 CSB-PGBD3P0DP91 1061 aa7.33□□□□□ -1.24
MSH2-205ENST00000467323 MTMR14Q8NCE2 650 aa7.33□□□□□ -1.24
MSH2-205ENST00000467323 BMP2KQ9NSY1 1161 aaPredicted RBP7.33□□□□□ -1.24
MSH2-205ENST00000467323 LOC105371045A0A1W2PR82 267 aa7.32□□□□□ -1.24
MSH2-205ENST00000467323 TUSC1Q2TAM9 212 aa7.32□□□□□ -1.24
MSH2-205ENST00000467323 ZNF428Q96B54 188 aa7.32□□□□□ -1.24
MSH2-205ENST00000467323 ANO8Q9HCE9 1232 aaPredicted RBP7.32□□□□□ -1.24
MSH2-205ENST00000467323 AMOTL2Q9Y2J4 779 aa7.32□□□□□ -1.24
MSH2-205ENST00000467323 IGSF3O75054 1194 aa7.31□□□□□ -1.24
MSH2-205ENST00000467323 RIC3Q7Z5B4 369 aa7.31□□□□□ -1.24
MSH2-205ENST00000467323 PIP4P2Q8N4L2 257 aa7.31□□□□□ -1.24
MSH2-205ENST00000467323 OCEL1Q9H607 264 aa7.31□□□□□ -1.24
MSH2-205ENST00000467323 CERKQ8TCT0 537 aa7.3□□□□□ -1.24
MSH2-205ENST00000467323 PXYLP1Q8TE99 480 aa7.3□□□□□ -1.24
MSH2-205ENST00000467323 PTCD2Q8WV60 388 aaKnown RBP7.3□□□□□ -1.24
MSH2-205ENST00000467323 POM121CA8CG34 1229 aa7.29□□□□□ -1.24
MSH2-205ENST00000467323 CCDC27Q2M243 656 aa7.29□□□□□ -1.24
MSH2-205ENST00000467323 SLAIN1Q8ND83 568 aa7.29□□□□□ -1.24
MSH2-205ENST00000467323 L3MBTL3Q96JM7 780 aaPredicted RBP7.29□□□□□ -1.24
MSH2-205ENST00000467323 LIMD1Q9UGP4 676 aa7.29□□□□□ -1.24
MSH2-205ENST00000467323 RBM33Q96EV2 1170 aaKnown RBP7.28□□□□□ -1.24
MSH2-205ENST00000467323 IRX5P78411 483 aaPredicted RBP7.27□□□□□ -1.25
MSH2-205ENST00000467323 WASHC4Q2M389 1173 aa7.27□□□□□ -1.25
MSH2-205ENST00000467323 IER5LQ5T953 404 aa7.27□□□□□ -1.25
MSH2-205ENST00000467323 TYW1BQ6NUM6 668 aa7.27□□□□□ -1.25
MSH2-205ENST00000467323 NLRP7Q8WX94 980 aa7.27□□□□□ -1.25
MSH2-205ENST00000467323 MYT1LQ9UL68 1186 aa7.27□□□□□ -1.25
MSH2-205ENST00000467323 TBC1D2BQ9UPU7 963 aa7.27□□□□□ -1.25
MSH2-205ENST00000467323 ADGRG1Q9Y653 693 aa7.27□□□□□ -1.25
MSH2-205ENST00000467323 SPTLC1O15269 473 aa7.26□□□□□ -1.25
MSH2-205ENST00000467323 TSR1Q2NL82 804 aaKnown RBP7.26□□□□□ -1.25
MSH2-205ENST00000467323 FAM161AQ3B820 660 aa7.26□□□□□ -1.25
MSH2-205ENST00000467323 HDGFL1Q5TGJ6 251 aa7.26□□□□□ -1.25
MSH2-205ENST00000467323 CHRDL2Q6WN34 429 aa7.26□□□□□ -1.25
MSH2-205ENST00000467323 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.25□□□□□ -1.25
MSH2-205ENST00000467323 FBXO31Q5XUX0 539 aaPredicted RBP7.25□□□□□ -1.25
MSH2-205ENST00000467323 SND1Q7KZF4 910 aaKnown RBP eCLIP7.25□□□□□ -1.25
MSH2-205ENST00000467323 SPIRE2Q8WWL2 714 aa7.25□□□□□ -1.25
MSH2-205ENST00000467323 RBM27Q9P2N5 1060 aaKnown RBP7.25□□□□□ -1.25
MSH2-205ENST00000467323 NDUFB9Q9Y6M9 179 aa7.25□□□□□ -1.25
MSH2-205ENST00000467323 AP1G2O75843 785 aa7.24□□□□□ -1.25
MSH2-205ENST00000467323 RFX1P22670 979 aa7.24□□□□□ -1.25
MSH2-205ENST00000467323 GJA5P36382 358 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms