RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 UBAP1LF5GYI3 381 aa25.17■■□□□ 1.62
TSSC4-208ENST00000467308 RSPH4AQ5TD94 716 aa25.17■■□□□ 1.62
TSSC4-208ENST00000467308 KDM5DQ9BY66 1539 aa25.15■■□□□ 1.62
TSSC4-208ENST00000467308 PZPP20742 1482 aa25.15■■□□□ 1.62
TSSC4-208ENST00000467308 KIF3BO15066 747 aa25.14■■□□□ 1.62
TSSC4-208ENST00000467308 POLR1AO95602 1720 aaPredicted RBP25.14■■□□□ 1.61
TSSC4-208ENST00000467308 CAMSAP2Q08AD1 1489 aa25.14■■□□□ 1.61
TSSC4-208ENST00000467308 NCOA2Q15596 1464 aa25.14■■□□□ 1.61
TSSC4-208ENST00000467308 TNRQ92752 1358 aa25.13■■□□□ 1.61
TSSC4-208ENST00000467308 FBXO31Q5XUX0 539 aaPredicted RBP25.1■■□□□ 1.61
TSSC4-208ENST00000467308 ARHGEF5Q12774 1597 aa25.09■■□□□ 1.61
TSSC4-208ENST00000467308 NEURL4Q96JN8 1562 aa25.09■■□□□ 1.61
TSSC4-208ENST00000467308 WASHC2CQ9Y4E1 1318 aa25.09■■□□□ 1.61
TSSC4-208ENST00000467308 CPS1P31327 1500 aa25.07■■□□□ 1.6
TSSC4-208ENST00000467308 NLRP1Q9C000 1473 aa25.05■■□□□ 1.6
TSSC4-208ENST00000467308 MIA2Q96PC5 1412 aa25.04■■□□□ 1.6
TSSC4-208ENST00000467308 SHANK2Q9UPX8 1470 aa25.03■■□□□ 1.6
TSSC4-208ENST00000467308 TSPY4P0CV99 314 aa25.03■■□□□ 1.6
TSSC4-208ENST00000467308 TSPY10P0CW01 314 aa25.03■■□□□ 1.6
TSSC4-208ENST00000467308 THEMISQ8N1K5 641 aaPredicted RBP25.03■■□□□ 1.6
TSSC4-208ENST00000467308 ANKLE2Q86XL3 938 aa25.02■■□□□ 1.6
TSSC4-208ENST00000467308 UGGT1Q9NYU2 1555 aa25.01■■□□□ 1.59
TSSC4-208ENST00000467308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25■■□□□ 1.59
TSSC4-208ENST00000467308 DEPDC5O75140 1603 aa25■■□□□ 1.59
TSSC4-208ENST00000467308 MED14O60244 1454 aa24.99■■□□□ 1.59
TSSC4-208ENST00000467308 TOM1O60784 492 aa24.99■■□□□ 1.59
TSSC4-208ENST00000467308 RNF17Q9BXT8 1623 aaKnown RBP24.99■■□□□ 1.59
TSSC4-208ENST00000467308 MAST1Q9Y2H9 1570 aa24.97■■□□□ 1.59
TSSC4-208ENST00000467308 ZC3H13Q5T200 1668 aaKnown RBP24.97■■□□□ 1.59
TSSC4-208ENST00000467308 VWDEQ8N2E2 1590 aa24.97■■□□□ 1.59
TSSC4-208ENST00000467308 LRRC9Q6ZRR7 1453 aa24.96■■□□□ 1.59
TSSC4-208ENST00000467308 NPHP4O75161 1426 aaPredicted RBP24.95■■□□□ 1.58
TSSC4-208ENST00000467308 EIF2AK4Q9P2K8 1649 aaKnown RBP24.94■■□□□ 1.58
TSSC4-208ENST00000467308 ABCC3O15438 1527 aa24.94■■□□□ 1.58
TSSC4-208ENST00000467308 SCAF1Q9H7N4 1312 aaKnown RBP24.92■■□□□ 1.58
TSSC4-208ENST00000467308 HSPA1LP34931 641 aa24.92■■□□□ 1.58
TSSC4-208ENST00000467308 PIP4K2BP78356 416 aa24.92■■□□□ 1.58
TSSC4-208ENST00000467308 VPS8Q8N3P4 1428 aa24.92■■□□□ 1.58
TSSC4-208ENST00000467308 IQGAP1P46940 1657 aa24.91■■□□□ 1.58
TSSC4-208ENST00000467308 MAP3K1Q13233 1512 aa24.88■■□□□ 1.57
TSSC4-208ENST00000467308 ERVK-7P63135 1459 aa24.88■■□□□ 1.57
TSSC4-208ENST00000467308 MED1Q15648 1581 aaPredicted RBP24.87■■□□□ 1.57
TSSC4-208ENST00000467308 MROH1Q8NDA8 1641 aa24.86■■□□□ 1.57
TSSC4-208ENST00000467308 ALKQ9UM73 1620 aa24.84■■□□□ 1.57
TSSC4-208ENST00000467308 MYOM3Q5VTT5 1437 aa24.84■■□□□ 1.57
TSSC4-208ENST00000467308 DUOX2Q9NRD8 1548 aa24.82■■□□□ 1.56
TSSC4-208ENST00000467308 CEP152O94986 1710 aa24.82■■□□□ 1.56
TSSC4-208ENST00000467308 STRCP1A6NGW2 1772 aa24.82■■□□□ 1.56
TSSC4-208ENST00000467308 UBR1Q8IWV7 1749 aa24.81■■□□□ 1.56
TSSC4-208ENST00000467308 SYNMO15061 1565 aa24.81■■□□□ 1.56
TSSC4-208ENST00000467308 KANK4Q5T7N3 995 aaPredicted RBP24.81■■□□□ 1.56
TSSC4-208ENST00000467308 CFAP65Q6ZU64 1925 aaKnown RBP24.8■■□□□ 1.56
TSSC4-208ENST00000467308 LRRC7Q96NW7 1537 aa24.8■■□□□ 1.56
TSSC4-208ENST00000467308 ARHGAP31Q2M1Z3 1444 aa24.77■■□□□ 1.56
TSSC4-208ENST00000467308 SCAF11Q99590 1463 aaKnown RBP24.77■■□□□ 1.56
TSSC4-208ENST00000467308 PRDM15P57071 1507 aaPredicted RBP24.76■■□□□ 1.55
TSSC4-208ENST00000467308 ERBINQ96RT1 1412 aa24.74■■□□□ 1.55
TSSC4-208ENST00000467308 ARHGAP23Q9P227 1491 aa24.74■■□□□ 1.55
TSSC4-208ENST00000467308 SLIT1O75093 1534 aa24.74■■□□□ 1.55
TSSC4-208ENST00000467308 KIF15Q9NS87 1388 aa24.73■■□□□ 1.55
TSSC4-208ENST00000467308 CROCC2H7BZ55 1655 aa24.72■■□□□ 1.55
TSSC4-208ENST00000467308 LOC105371045A0A1W2PR82 267 aa24.72■■□□□ 1.55
TSSC4-208ENST00000467308 ABCC5O15440 1437 aa24.69■■□□□ 1.54
TSSC4-208ENST00000467308 LTKP29376 864 aa24.69■■□□□ 1.54
TSSC4-208ENST00000467308 TXNDC2Q86VQ3 553 aa24.69■■□□□ 1.54
TSSC4-208ENST00000467308 PHF23Q9BUL5 403 aaPredicted RBP24.67■■□□□ 1.54
TSSC4-208ENST00000467308 PTPN23Q9H3S7 1636 aa24.67■■□□□ 1.54
TSSC4-208ENST00000467308 RRP7BPQ9NSQ0 103 aa24.66■■□□□ 1.54
TSSC4-208ENST00000467308 EID1Q9Y6B2 187 aa24.66■■□□□ 1.54
TSSC4-208ENST00000467308 PIK3C2BO00750 1634 aa24.64■■□□□ 1.54
TSSC4-208ENST00000467308 KDM5AP29375 1690 aaKnown RBP24.64■■□□□ 1.53
TSSC4-208ENST00000467308 DAPK1P53355 1430 aa24.63■■□□□ 1.53
TSSC4-208ENST00000467308 KANK1Q14678 1352 aa24.63■■□□□ 1.53
TSSC4-208ENST00000467308 TMEM2Q9UHN6 1383 aa24.63■■□□□ 1.53
TSSC4-208ENST00000467308 XIRP1Q702N8 1843 aaKnown RBP24.63■■□□□ 1.53
TSSC4-208ENST00000467308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.61■■□□□ 1.53
TSSC4-208ENST00000467308 LMTK2Q8IWU2 1503 aa24.61■■□□□ 1.53
TSSC4-208ENST00000467308 EFCAB6Q5THR3 1501 aa24.58■■□□□ 1.53
TSSC4-208ENST00000467308 APLP2Q06481 763 aa24.58■■□□□ 1.53
TSSC4-208ENST00000467308 FGD6Q6ZV73 1430 aa24.58■■□□□ 1.53
TSSC4-208ENST00000467308 ANKRD30AQ9BXX3 1397 aa24.57■■□□□ 1.52
TSSC4-208ENST00000467308 SENP3Q9H4L4 574 aaPredicted RBP24.57■■□□□ 1.52
TSSC4-208ENST00000467308 STAG3Q9UJ98 1225 aa24.57■■□□□ 1.52
TSSC4-208ENST00000467308 IDI1Q13907 227 aa24.54■■□□□ 1.52
TSSC4-208ENST00000467308 FAM135BQ49AJ0 1406 aa24.53■■□□□ 1.52
TSSC4-208ENST00000467308 TET3O43151 1660 aa24.52■■□□□ 1.52
TSSC4-208ENST00000467308 NOS1P29475 1434 aa24.52■■□□□ 1.52
TSSC4-208ENST00000467308 KCNA6P17658 529 aa24.51■■□□□ 1.51
TSSC4-208ENST00000467308 TMEM94Q12767 1356 aa24.5■■□□□ 1.51
TSSC4-208ENST00000467308 CHIC2Q9UKJ5 165 aa24.49■■□□□ 1.51
TSSC4-208ENST00000467308 ADGRB3O60242 1522 aa24.48■■□□□ 1.51
TSSC4-208ENST00000467308 ADGRL2O95490 1459 aa24.47■■□□□ 1.51
TSSC4-208ENST00000467308 SLC52A1Q9NWF4 448 aa24.47■■□□□ 1.51
TSSC4-208ENST00000467308 SLC26A8Q96RN1 970 aa24.45■■□□□ 1.5
TSSC4-208ENST00000467308 RGS17Q9UGC6 210 aaPredicted RBP24.45■■□□□ 1.5
TSSC4-208ENST00000467308 NKTRP30414 1462 aaKnown RBP24.45■■□□□ 1.5
TSSC4-208ENST00000467308 RPRD2Q5VT52 1461 aaKnown RBP24.45■■□□□ 1.5
TSSC4-208ENST00000467308 NWD1Q149M9 1564 aa24.44■■□□□ 1.5
TSSC4-208ENST00000467308 PROSER2Q86WR7 435 aaPredicted RBP24.43■■□□□ 1.5
TSSC4-208ENST00000467308 ROBO1Q9Y6N7 1651 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms