RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 CROCC2H7BZ55 1655 aa13.83□□□□□ -0.2
APOBEC1-202ENST00000467171 ZNF316A6NFI3 1004 aaPredicted RBP13.83□□□□□ -0.2
APOBEC1-202ENST00000467171 CDC42BPBQ9Y5S2 1711 aa13.83□□□□□ -0.2
APOBEC1-202ENST00000467171 KDM6BO15054 1643 aa13.82□□□□□ -0.2
APOBEC1-202ENST00000467171 SIN3AQ96ST3 1273 aa13.82□□□□□ -0.2
APOBEC1-202ENST00000467171 MAST1Q9Y2H9 1570 aa13.82□□□□□ -0.2
APOBEC1-202ENST00000467171 ADGBQ8N7X0 1667 aa13.82□□□□□ -0.2
APOBEC1-202ENST00000467171 DENND4BO75064 1496 aaPredicted RBP13.81□□□□□ -0.2
APOBEC1-202ENST00000467171 KIF15Q9NS87 1388 aa13.81□□□□□ -0.2
APOBEC1-202ENST00000467171 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
APOBEC1-202ENST00000467171 MYO5CQ9NQX4 1742 aa13.8□□□□□ -0.2
APOBEC1-202ENST00000467171 SYCP2Q9BX26 1530 aa13.8□□□□□ -0.2
APOBEC1-202ENST00000467171 ABCA9Q8IUA7 1624 aa13.79□□□□□ -0.2
APOBEC1-202ENST00000467171 ARHGEF12Q9NZN5 1544 aa13.79□□□□□ -0.2
APOBEC1-202ENST00000467171 EVX2Q03828 476 aa13.78□□□□□ -0.2
APOBEC1-202ENST00000467171 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
APOBEC1-202ENST00000467171 ABCC1P33527 1531 aa13.78□□□□□ -0.2
APOBEC1-202ENST00000467171 RTEL1-TNFRSF6BF6WH68 1400 aa13.77□□□□□ -0.21
APOBEC1-202ENST00000467171 PPP1R15AO75807 674 aaPredicted RBP13.77□□□□□ -0.21
APOBEC1-202ENST00000467171 ANKRD30BQ9BXX2 1392 aa13.77□□□□□ -0.21
APOBEC1-202ENST00000467171 KDM5DQ9BY66 1539 aa13.76□□□□□ -0.21
APOBEC1-202ENST00000467171 PZPP20742 1482 aa13.76□□□□□ -0.21
APOBEC1-202ENST00000467171 C19orf67A6NJJ6 358 aa13.76□□□□□ -0.21
APOBEC1-202ENST00000467171 FANCAO15360 1455 aa13.75□□□□□ -0.21
APOBEC1-202ENST00000467171 TRAPPC8Q9Y2L5 1435 aa13.74□□□□□ -0.21
APOBEC1-202ENST00000467171 TONSLQ96HA7 1378 aa13.74□□□□□ -0.21
APOBEC1-202ENST00000467171 SPDYE4A6NLX3 237 aa13.74□□□□□ -0.21
APOBEC1-202ENST00000467171 PLXNC1O60486 1568 aa13.73□□□□□ -0.21
APOBEC1-202ENST00000467171 ERBINQ96RT1 1412 aa13.72□□□□□ -0.21
APOBEC1-202ENST00000467171 NUP155O75694 1391 aa13.71□□□□□ -0.21
APOBEC1-202ENST00000467171 SPAG9O60271 1321 aaKnown RBP13.71□□□□□ -0.21
APOBEC1-202ENST00000467171 DUOX2Q9NRD8 1548 aa13.71□□□□□ -0.21
APOBEC1-202ENST00000467171 CYB5RLQ6IPT4 315 aa13.71□□□□□ -0.21
APOBEC1-202ENST00000467171 CD109Q6YHK3 1445 aa13.71□□□□□ -0.22
APOBEC1-202ENST00000467171 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
APOBEC1-202ENST00000467171 ADGRL1O94910 1474 aa13.69□□□□□ -0.22
APOBEC1-202ENST00000467171 RPRD2Q5VT52 1461 aaKnown RBP13.69□□□□□ -0.22
APOBEC1-202ENST00000467171 PKD2Q13563 968 aa13.69□□□□□ -0.22
APOBEC1-202ENST00000467171 DIEXFQ68CQ4 756 aaKnown RBP13.69□□□□□ -0.22
APOBEC1-202ENST00000467171 SCAPERQ9BY12 1400 aa13.69□□□□□ -0.22
APOBEC1-202ENST00000467171 AFAP1Q8N556 730 aa13.68□□□□□ -0.22
APOBEC1-202ENST00000467171 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
APOBEC1-202ENST00000467171 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
APOBEC1-202ENST00000467171 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
APOBEC1-202ENST00000467171 NEO1Q92859 1461 aa13.66□□□□□ -0.22
APOBEC1-202ENST00000467171 ZFYVE16Q7Z3T8 1539 aa13.65□□□□□ -0.22
APOBEC1-202ENST00000467171 MAGI2Q86UL8 1455 aa13.65□□□□□ -0.22
APOBEC1-202ENST00000467171 UNC13BO14795 1591 aa13.64□□□□□ -0.23
APOBEC1-202ENST00000467171 GLI2P10070 1586 aa13.64□□□□□ -0.23
APOBEC1-202ENST00000467171 CFAP74Q9C0B2 1584 aa13.63□□□□□ -0.23
APOBEC1-202ENST00000467171 ZNF518AQ6AHZ1 1483 aa13.63□□□□□ -0.23
APOBEC1-202ENST00000467171 FARP1Q9Y4F1 1045 aaPredicted RBP13.63□□□□□ -0.23
APOBEC1-202ENST00000467171 FAM135AQ9P2D6 1515 aa13.63□□□□□ -0.23
APOBEC1-202ENST00000467171 L3MBTL2Q969R5 705 aa13.62□□□□□ -0.23
APOBEC1-202ENST00000467171 POGZQ7Z3K3 1410 aa13.62□□□□□ -0.23
APOBEC1-202ENST00000467171 TEX14Q8IWB6 1497 aa13.61□□□□□ -0.23
APOBEC1-202ENST00000467171 DHX29Q7Z478 1369 aaKnown RBP13.61□□□□□ -0.23
APOBEC1-202ENST00000467171 ATP7AQ04656 1500 aa13.61□□□□□ -0.23
APOBEC1-202ENST00000467171 INO80Q9ULG1 1556 aaPredicted RBP13.61□□□□□ -0.23
APOBEC1-202ENST00000467171 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
APOBEC1-202ENST00000467171 ATP10AO60312 1499 aa13.59□□□□□ -0.23
APOBEC1-202ENST00000467171 KDM5CP41229 1560 aa13.58□□□□□ -0.23
APOBEC1-202ENST00000467171 IQGAP3Q86VI3 1631 aa13.57□□□□□ -0.24
APOBEC1-202ENST00000467171 MAP3K4Q9Y6R4 1608 aa13.55□□□□□ -0.24
APOBEC1-202ENST00000467171 CD44P16070 742 aaKnown RBP13.54□□□□□ -0.24
APOBEC1-202ENST00000467171 FAM69CQ0P6D2 419 aa13.54□□□□□ -0.24
APOBEC1-202ENST00000467171 PLA2R1Q13018 1463 aa13.54□□□□□ -0.24
APOBEC1-202ENST00000467171 GABBR2O75899 941 aa13.53□□□□□ -0.24
APOBEC1-202ENST00000467171 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
APOBEC1-202ENST00000467171 KANK1Q14678 1352 aa13.53□□□□□ -0.24
APOBEC1-202ENST00000467171 UHRF1BP1Q6BDS2 1440 aa13.53□□□□□ -0.24
APOBEC1-202ENST00000467171 A2MP01023 1474 aa13.53□□□□□ -0.24
APOBEC1-202ENST00000467171 VWDEQ8N2E2 1590 aa13.53□□□□□ -0.24
APOBEC1-202ENST00000467171 EIF2AK4Q9P2K8 1649 aaKnown RBP13.53□□□□□ -0.24
APOBEC1-202ENST00000467171 MYT1LQ9UL68 1186 aa13.52□□□□□ -0.25
APOBEC1-202ENST00000467171 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.25
APOBEC1-202ENST00000467171 DIP2BQ9P265 1576 aa13.52□□□□□ -0.25
APOBEC1-202ENST00000467171 DEPDC5O75140 1603 aa13.51□□□□□ -0.25
APOBEC1-202ENST00000467171 KIF3BO15066 747 aa13.51□□□□□ -0.25
APOBEC1-202ENST00000467171 NBPF8Q3BBV2 869 aa13.51□□□□□ -0.25
APOBEC1-202ENST00000467171 KIDINS220Q9ULH0 1771 aa13.5□□□□□ -0.25
APOBEC1-202ENST00000467171 PTPRTO14522 1441 aa13.5□□□□□ -0.25
APOBEC1-202ENST00000467171 HECW2Q9P2P5 1572 aa13.49□□□□□ -0.25
APOBEC1-202ENST00000467171 PRDM15P57071 1507 aaPredicted RBP13.49□□□□□ -0.25
APOBEC1-202ENST00000467171 LMTK2Q8IWU2 1503 aa13.49□□□□□ -0.25
APOBEC1-202ENST00000467171 RAPGEF3O95398 923 aa13.48□□□□□ -0.25
APOBEC1-202ENST00000467171 EIF4G2P78344 907 aaKnown RBP eCLIP13.48□□□□□ -0.25
APOBEC1-202ENST00000467171 STAC3Q96MF2 364 aa13.46□□□□□ -0.25
APOBEC1-202ENST00000467171 MROH1Q8NDA8 1641 aa13.46□□□□□ -0.26
APOBEC1-202ENST00000467171 FRMPD1Q5SYB0 1578 aa13.45□□□□□ -0.26
APOBEC1-202ENST00000467171 HSPA5P11021 654 aaKnown RBP13.45□□□□□ -0.26
APOBEC1-202ENST00000467171 ZMYM4Q5VZL5 1548 aa13.44□□□□□ -0.26
APOBEC1-202ENST00000467171 RNF17Q9BXT8 1623 aaKnown RBP13.44□□□□□ -0.26
APOBEC1-202ENST00000467171 MIER1Q8N108 512 aa13.44□□□□□ -0.26
APOBEC1-202ENST00000467171 SPATA31E1Q6ZUB1 1445 aa13.44□□□□□ -0.26
APOBEC1-202ENST00000467171 BCORL1Q5H9F3 1711 aa13.44□□□□□ -0.26
APOBEC1-202ENST00000467171 TRPM2O94759 1503 aa13.44□□□□□ -0.26
APOBEC1-202ENST00000467171 TET3O43151 1660 aa13.44□□□□□ -0.26
APOBEC1-202ENST00000467171 RALGAPBQ86X10 1494 aa13.43□□□□□ -0.26
APOBEC1-202ENST00000467171 CLCN6P51797 869 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms