RNA–Protein interactions for RNA: ENST00000467052.1

COL15A1-202, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-202ENST00000467052 KIAA1107Q9UPP5 1409 aa22.66■■□□□ 1.22
COL15A1-202ENST00000467052 GPATCH8Q9UKJ3 1502 aaKnown RBP22.66■■□□□ 1.22
COL15A1-202ENST00000467052 FYCO1Q9BQS8 1478 aa22.66■■□□□ 1.22
COL15A1-202ENST00000467052 FAM135AQ9P2D6 1515 aa22.65■■□□□ 1.22
COL15A1-202ENST00000467052 TNRQ92752 1358 aa22.63■■□□□ 1.21
COL15A1-202ENST00000467052 KDM5DQ9BY66 1539 aa22.62■■□□□ 1.21
COL15A1-202ENST00000467052 HNRNPMP52272 730 aaKnown RBP eCLIP22.62■■□□□ 1.21
COL15A1-202ENST00000467052 PZPP20742 1482 aa22.6■■□□□ 1.21
COL15A1-202ENST00000467052 STRCP1A6NGW2 1772 aa22.6■■□□□ 1.21
COL15A1-202ENST00000467052 UGGT1Q9NYU2 1555 aa22.59■■□□□ 1.21
COL15A1-202ENST00000467052 NPHP4O75161 1426 aaPredicted RBP22.57■■□□□ 1.2
COL15A1-202ENST00000467052 MED14O60244 1454 aa22.57■■□□□ 1.2
COL15A1-202ENST00000467052 NLRP1Q9C000 1473 aa22.56■■□□□ 1.2
COL15A1-202ENST00000467052 ANKLE2Q86XL3 938 aa22.56■■□□□ 1.2
COL15A1-202ENST00000467052 CFDP1Q9UEE9 299 aaPredicted RBP22.55■■□□□ 1.2
COL15A1-202ENST00000467052 CCNB3Q8WWL7 1395 aa22.54■■□□□ 1.2
COL15A1-202ENST00000467052 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.54■■□□□ 1.2
COL15A1-202ENST00000467052 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
COL15A1-202ENST00000467052 LRRC7Q96NW7 1537 aa22.52■■□□□ 1.19
COL15A1-202ENST00000467052 THEMISQ8N1K5 641 aaPredicted RBP22.5■■□□□ 1.19
COL15A1-202ENST00000467052 TIAM1Q13009 1591 aa22.5■■□□□ 1.19
COL15A1-202ENST00000467052 RTEL1-TNFRSF6BF6WH68 1400 aa22.49■■□□□ 1.19
COL15A1-202ENST00000467052 ZC3H13Q5T200 1668 aaKnown RBP22.49■■□□□ 1.19
COL15A1-202ENST00000467052 FBXO31Q5XUX0 539 aaPredicted RBP22.47■■□□□ 1.19
COL15A1-202ENST00000467052 DHX29Q7Z478 1369 aaKnown RBP22.47■■□□□ 1.19
COL15A1-202ENST00000467052 XIRP1Q702N8 1843 aaKnown RBP22.45■■□□□ 1.19
COL15A1-202ENST00000467052 MIA2Q96PC5 1412 aa22.45■■□□□ 1.18
COL15A1-202ENST00000467052 MBD5Q9P267 1494 aa22.43■■□□□ 1.18
COL15A1-202ENST00000467052 MTUS2Q5JR59 1369 aa22.43■■□□□ 1.18
COL15A1-202ENST00000467052 SETD1AO15047 1707 aaKnown RBP22.43■■□□□ 1.18
COL15A1-202ENST00000467052 EHBP1L1Q8N3D4 1523 aa22.42■■□□□ 1.18
COL15A1-202ENST00000467052 KIF3BO15066 747 aa22.42■■□□□ 1.18
COL15A1-202ENST00000467052 WASHC2CQ9Y4E1 1318 aa22.41■■□□□ 1.18
COL15A1-202ENST00000467052 CCDC141Q6ZP82 1450 aa22.41■■□□□ 1.18
COL15A1-202ENST00000467052 UBR1Q8IWV7 1749 aa22.4■■□□□ 1.18
COL15A1-202ENST00000467052 RGS17Q9UGC6 210 aaPredicted RBP22.4■■□□□ 1.18
COL15A1-202ENST00000467052 CFAP65Q6ZU64 1925 aaKnown RBP22.35■■□□□ 1.17
COL15A1-202ENST00000467052 ZNF644Q9H582 1327 aaPredicted RBP22.34■■□□□ 1.17
COL15A1-202ENST00000467052 CEP152O94986 1710 aa22.34■■□□□ 1.17
COL15A1-202ENST00000467052 SCAF11Q99590 1463 aaKnown RBP22.34■■□□□ 1.17
COL15A1-202ENST00000467052 ABCC3O15438 1527 aa22.32■■□□□ 1.16
COL15A1-202ENST00000467052 EIF2AK4Q9P2K8 1649 aaKnown RBP22.32■■□□□ 1.16
COL15A1-202ENST00000467052 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
COL15A1-202ENST00000467052 ERVK-7P63135 1459 aa22.32■■□□□ 1.16
COL15A1-202ENST00000467052 CAMSAP2Q08AD1 1489 aa22.32■■□□□ 1.16
COL15A1-202ENST00000467052 ROBO1Q9Y6N7 1651 aa22.32■■□□□ 1.16
COL15A1-202ENST00000467052 ARHGEF5Q12774 1597 aa22.29■■□□□ 1.16
COL15A1-202ENST00000467052 CEP162Q5TB80 1403 aa22.28■■□□□ 1.16
COL15A1-202ENST00000467052 FAM135BQ49AJ0 1406 aa22.27■■□□□ 1.16
COL15A1-202ENST00000467052 POTEAQ6S8J7 498 aa22.27■■□□□ 1.16
COL15A1-202ENST00000467052 SLIT1O75093 1534 aa22.26■■□□□ 1.15
COL15A1-202ENST00000467052 LRRC9Q6ZRR7 1453 aa22.24■■□□□ 1.15
COL15A1-202ENST00000467052 PHLPP1O60346 1717 aa22.23■■□□□ 1.15
COL15A1-202ENST00000467052 ARHGAP23Q9P227 1491 aa22.23■■□□□ 1.15
COL15A1-202ENST00000467052 MROH1Q8NDA8 1641 aa22.22■■□□□ 1.15
COL15A1-202ENST00000467052 RSPH4AQ5TD94 716 aa22.22■■□□□ 1.15
COL15A1-202ENST00000467052 NCOA2Q15596 1464 aa22.21■■□□□ 1.15
COL15A1-202ENST00000467052 MAST1Q9Y2H9 1570 aa22.21■■□□□ 1.15
COL15A1-202ENST00000467052 PIK3C2BO00750 1634 aa22.18■■□□□ 1.14
COL15A1-202ENST00000467052 KDM5AP29375 1690 aaKnown RBP22.17■■□□□ 1.14
COL15A1-202ENST00000467052 MAP3K1Q13233 1512 aa22.17■■□□□ 1.14
COL15A1-202ENST00000467052 TSPY4P0CV99 314 aa22.14■■□□□ 1.13
COL15A1-202ENST00000467052 TSPY10P0CW01 314 aa22.14■■□□□ 1.13
COL15A1-202ENST00000467052 TXNDC2Q86VQ3 553 aa22.14■■□□□ 1.13
COL15A1-202ENST00000467052 EID1Q9Y6B2 187 aa22.14■■□□□ 1.13
COL15A1-202ENST00000467052 TMEM94Q12767 1356 aa22.13■■□□□ 1.13
COL15A1-202ENST00000467052 NWD1Q149M9 1564 aa22.12■■□□□ 1.13
COL15A1-202ENST00000467052 PRDM15P57071 1507 aaPredicted RBP22.11■■□□□ 1.13
COL15A1-202ENST00000467052 NKTRP30414 1462 aaKnown RBP22.11■■□□□ 1.13
COL15A1-202ENST00000467052 LTKP29376 864 aa22.11■■□□□ 1.13
COL15A1-202ENST00000467052 JCADQ9P266 1359 aa22.09■■□□□ 1.13
COL15A1-202ENST00000467052 EFCAB6Q5THR3 1501 aa22.08■■□□□ 1.13
COL15A1-202ENST00000467052 COL16A1Q07092 1604 aaPredicted RBP22.08■■□□□ 1.13
COL15A1-202ENST00000467052 DUOX2Q9NRD8 1548 aa22.07■■□□□ 1.12
COL15A1-202ENST00000467052 ARHGAP31Q2M1Z3 1444 aa22.06■■□□□ 1.12
COL15A1-202ENST00000467052 TMEM2Q9UHN6 1383 aa22.06■■□□□ 1.12
COL15A1-202ENST00000467052 MSH6P52701 1360 aa22.05■■□□□ 1.12
COL15A1-202ENST00000467052 SHPRHQ149N8 1683 aa22.04■■□□□ 1.12
COL15A1-202ENST00000467052 CROCC2H7BZ55 1655 aa22.02■■□□□ 1.12
COL15A1-202ENST00000467052 TET3O43151 1660 aa22.02■■□□□ 1.12
COL15A1-202ENST00000467052 KCNA6P17658 529 aa22.02■■□□□ 1.12
COL15A1-202ENST00000467052 PROSER2Q86WR7 435 aaPredicted RBP22.02■■□□□ 1.12
COL15A1-202ENST00000467052 STAG3Q9UJ98 1225 aa22.02■■□□□ 1.12
COL15A1-202ENST00000467052 UPF1Q92900 1129 aaKnown RBP eCLIP22.01■■□□□ 1.11
COL15A1-202ENST00000467052 CHD2O14647 1828 aaKnown RBP21.99■■□□□ 1.11
COL15A1-202ENST00000467052 LRP6O75581 1613 aa21.99■■□□□ 1.11
COL15A1-202ENST00000467052 ADGRB3O60242 1522 aa21.99■■□□□ 1.11
COL15A1-202ENST00000467052 FGD6Q6ZV73 1430 aa21.98■■□□□ 1.11
COL15A1-202ENST00000467052 MEX3CQ5U5Q3 659 aaKnown RBP21.98■■□□□ 1.11
COL15A1-202ENST00000467052 ZNF772Q68DY9 489 aaPredicted RBP21.98■■□□□ 1.11
COL15A1-202ENST00000467052 ERBINQ96RT1 1412 aa21.97■■□□□ 1.11
COL15A1-202ENST00000467052 TRIM52Q96A61 297 aa21.96■■□□□ 1.11
COL15A1-202ENST00000467052 SPATA31A6Q5VVP1 1343 aa21.96■■□□□ 1.11
COL15A1-202ENST00000467052 RBM33Q96EV2 1170 aaKnown RBP21.95■■□□□ 1.1
COL15A1-202ENST00000467052 AHDC1Q5TGY3 1603 aaPredicted RBP21.95■■□□□ 1.1
COL15A1-202ENST00000467052 SLC26A8Q96RN1 970 aa21.93■■□□□ 1.1
COL15A1-202ENST00000467052 CDK12Q9NYV4 1490 aaPredicted RBP21.93■■□□□ 1.1
COL15A1-202ENST00000467052 SLAIN2Q9P270 581 aa21.93■■□□□ 1.1
COL15A1-202ENST00000467052 MYO5BQ9ULV0 1848 aa21.93■■□□□ 1.1
COL15A1-202ENST00000467052 KANK1Q14678 1352 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms