RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 FBXO31Q5XUX0 539 aaPredicted RBP21.46■■□□□ 1.03
UBR4-210ENST00000466969 PREX2Q70Z35 1606 aa21.45■■□□□ 1.02
UBR4-210ENST00000466969 PLXNC1O60486 1568 aa21.44■■□□□ 1.02
UBR4-210ENST00000466969 UGGT1Q9NYU2 1555 aa21.44■■□□□ 1.02
UBR4-210ENST00000466969 RXRBP28702 533 aa21.42■■□□□ 1.02
UBR4-210ENST00000466969 FOXD1Q16676 465 aa21.42■■□□□ 1.02
UBR4-210ENST00000466969 MEX3CQ5U5Q3 659 aaKnown RBP21.42■■□□□ 1.02
UBR4-210ENST00000466969 JCADQ9P266 1359 aa21.41■■□□□ 1.02
UBR4-210ENST00000466969 CSRNP3Q8WYN3 585 aa21.4■■□□□ 1.02
UBR4-210ENST00000466969 ATP7AQ04656 1500 aa21.39■■□□□ 1.02
UBR4-210ENST00000466969 NLRP1Q9C000 1473 aa21.39■■□□□ 1.02
UBR4-210ENST00000466969 ZNF777Q9ULD5 760 aaPredicted RBP21.39■■□□□ 1.01
UBR4-210ENST00000466969 ROBO1Q9Y6N7 1651 aa21.39■■□□□ 1.01
UBR4-210ENST00000466969 ZRANB1Q9UGI0 708 aa21.37■■□□□ 1.01
UBR4-210ENST00000466969 PZPP20742 1482 aa21.36■■□□□ 1.01
UBR4-210ENST00000466969 MIA2Q96PC5 1412 aa21.36■■□□□ 1.01
UBR4-210ENST00000466969 XIRP1Q702N8 1843 aaKnown RBP21.35■■□□□ 1.01
UBR4-210ENST00000466969 FMN1Q68DA7 1419 aa21.35■■□□□ 1.01
UBR4-210ENST00000466969 HNRNPMP52272 730 aaKnown RBP eCLIP21.34■■□□□ 1.01
UBR4-210ENST00000466969 KDM5DQ9BY66 1539 aa21.34■■□□□ 1.01
UBR4-210ENST00000466969 CDK12Q9NYV4 1490 aaPredicted RBP21.33■■□□□ 1.01
UBR4-210ENST00000466969 SYCP2Q9BX26 1530 aa21.33■■□□□ 1
UBR4-210ENST00000466969 LRRC9Q6ZRR7 1453 aa21.3■■□□□ 1
UBR4-210ENST00000466969 INO80Q9ULG1 1556 aaPredicted RBP21.3■■□□□ 1
UBR4-210ENST00000466969 SPATA31A6Q5VVP1 1343 aa21.29■■□□□ 1
UBR4-210ENST00000466969 PHLPP1O60346 1717 aa21.29■■□□□ 1
UBR4-210ENST00000466969 ZC3H13Q5T200 1668 aaKnown RBP21.29■■□□□ 1
UBR4-210ENST00000466969 WASHC2CQ9Y4E1 1318 aa21.27■□□□□ 0.99
UBR4-210ENST00000466969 LRP6O75581 1613 aa21.26■□□□□ 0.99
UBR4-210ENST00000466969 TMEM94Q12767 1356 aa21.26■□□□□ 0.99
UBR4-210ENST00000466969 ADGBQ8N7X0 1667 aa21.26■□□□□ 0.99
UBR4-210ENST00000466969 CDC42BPAQ5VT25 1732 aa21.26■□□□□ 0.99
UBR4-210ENST00000466969 NUTM2BA6NNL0 878 aaPredicted RBP21.23■□□□□ 0.99
UBR4-210ENST00000466969 NUTM2EB1AL46 878 aaPredicted RBP21.23■□□□□ 0.99
UBR4-210ENST00000466969 NUTM2DQ5VT03 806 aaPredicted RBP21.23■□□□□ 0.99
UBR4-210ENST00000466969 NUTM2AQ8IVF1 878 aaPredicted RBP21.23■□□□□ 0.99
UBR4-210ENST00000466969 SCAF11Q99590 1463 aaKnown RBP21.22■□□□□ 0.99
UBR4-210ENST00000466969 RBM33Q96EV2 1170 aaKnown RBP21.22■□□□□ 0.99
UBR4-210ENST00000466969 SETBP1Q9Y6X0 1596 aa21.22■□□□□ 0.99
UBR4-210ENST00000466969 KIAA1107Q9UPP5 1409 aa21.21■□□□□ 0.99
UBR4-210ENST00000466969 KIF3BO15066 747 aa21.2■□□□□ 0.98
UBR4-210ENST00000466969 PLEKHH2Q8IVE3 1493 aa21.2■□□□□ 0.98
UBR4-210ENST00000466969 FGD6Q6ZV73 1430 aa21.19■□□□□ 0.98
UBR4-210ENST00000466969 TXNDC2Q86VQ3 553 aa21.18■□□□□ 0.98
UBR4-210ENST00000466969 PROSER2Q86WR7 435 aaPredicted RBP21.18■□□□□ 0.98
UBR4-210ENST00000466969 SLAIN2Q9P270 581 aa21.18■□□□□ 0.98
UBR4-210ENST00000466969 DHX29Q7Z478 1369 aaKnown RBP21.17■□□□□ 0.98
UBR4-210ENST00000466969 CHIC1Q5VXU3 224 aa21.16■□□□□ 0.98
UBR4-210ENST00000466969 RGS12O14924 1447 aa21.15■□□□□ 0.98
UBR4-210ENST00000466969 COL16A1Q07092 1604 aaPredicted RBP21.15■□□□□ 0.98
UBR4-210ENST00000466969 MSH6P52701 1360 aa21.14■□□□□ 0.98
UBR4-210ENST00000466969 LTKP29376 864 aa21.14■□□□□ 0.97
UBR4-210ENST00000466969 LRRIQ1Q96JM4 1722 aa21.14■□□□□ 0.97
UBR4-210ENST00000466969 MAP3K1Q13233 1512 aa21.14■□□□□ 0.97
UBR4-210ENST00000466969 ATAD2Q6PL18 1390 aa21.13■□□□□ 0.97
UBR4-210ENST00000466969 AFF2P51816 1311 aa21.13■□□□□ 0.97
UBR4-210ENST00000466969 EID1Q9Y6B2 187 aa21.13■□□□□ 0.97
UBR4-210ENST00000466969 KCNA6P17658 529 aa21.12■□□□□ 0.97
UBR4-210ENST00000466969 RBM6P78332 1123 aaKnown RBP21.12■□□□□ 0.97
UBR4-210ENST00000466969 CFDP1Q9UEE9 299 aaPredicted RBP21.12■□□□□ 0.97
UBR4-210ENST00000466969 GPATCH8Q9UKJ3 1502 aaKnown RBP21.11■□□□□ 0.97
UBR4-210ENST00000466969 CCDC18Q5T9S5 1454 aa21.07■□□□□ 0.96
UBR4-210ENST00000466969 QTRT2Q9H974 415 aaKnown RBP21.07■□□□□ 0.96
UBR4-210ENST00000466969 UBR1Q8IWV7 1749 aa21.07■□□□□ 0.96
UBR4-210ENST00000466969 SHPRHQ149N8 1683 aa21.06■□□□□ 0.96
UBR4-210ENST00000466969 RTEL1-TNFRSF6BF6WH68 1400 aa21.06■□□□□ 0.96
UBR4-210ENST00000466969 PRDM15P57071 1507 aaPredicted RBP21.06■□□□□ 0.96
UBR4-210ENST00000466969 ARHGAP35Q9NRY4 1499 aa21.05■□□□□ 0.96
UBR4-210ENST00000466969 ARHGAP23Q9P227 1491 aa21.05■□□□□ 0.96
UBR4-210ENST00000466969 SLIT1O75093 1534 aa21.04■□□□□ 0.96
UBR4-210ENST00000466969 TIAM1Q13009 1591 aa21.03■□□□□ 0.96
UBR4-210ENST00000466969 NGLY1Q96IV0 654 aa21.03■□□□□ 0.96
UBR4-210ENST00000466969 EEA1Q15075 1411 aa21.03■□□□□ 0.96
UBR4-210ENST00000466969 NCOA2Q15596 1464 aa21.02■□□□□ 0.96
UBR4-210ENST00000466969 ERVK-7P63135 1459 aa21.01■□□□□ 0.95
UBR4-210ENST00000466969 ABCC3O15438 1527 aa21■□□□□ 0.95
UBR4-210ENST00000466969 CCDC125Q86Z20 511 aa21■□□□□ 0.95
UBR4-210ENST00000466969 NKTRP30414 1462 aaKnown RBP21■□□□□ 0.95
UBR4-210ENST00000466969 CCNB3Q8WWL7 1395 aa20.98■□□□□ 0.95
UBR4-210ENST00000466969 C8orf37Q96NL8 207 aa20.97■□□□□ 0.95
UBR4-210ENST00000466969 SLC26A8Q96RN1 970 aa20.97■□□□□ 0.95
UBR4-210ENST00000466969 UBTFP17480 764 aaKnown RBP20.96■□□□□ 0.95
UBR4-210ENST00000466969 IFFO2Q5TF58 517 aa20.96■□□□□ 0.95
UBR4-210ENST00000466969 AHDC1Q5TGY3 1603 aaPredicted RBP20.96■□□□□ 0.95
UBR4-210ENST00000466969 LRP5O75197 1615 aa20.93■□□□□ 0.94
UBR4-210ENST00000466969 STAG3Q9UJ98 1225 aa20.93■□□□□ 0.94
UBR4-210ENST00000466969 ZNF644Q9H582 1327 aaPredicted RBP20.93■□□□□ 0.94
UBR4-210ENST00000466969 TMEM2Q9UHN6 1383 aa20.92■□□□□ 0.94
UBR4-210ENST00000466969 CASKIN1Q8WXD9 1431 aa20.92■□□□□ 0.94
UBR4-210ENST00000466969 MBD5Q9P267 1494 aa20.92■□□□□ 0.94
UBR4-210ENST00000466969 KDM5AP29375 1690 aaKnown RBP20.91■□□□□ 0.94
UBR4-210ENST00000466969 EP400Q96L91 3159 aa20.91■□□□□ 0.94
UBR4-210ENST00000466969 NWD1Q149M9 1564 aa20.9■□□□□ 0.94
UBR4-210ENST00000466969 C14orf37Q86TY3 774 aa20.9■□□□□ 0.94
UBR4-210ENST00000466969 CFAP65Q6ZU64 1925 aaKnown RBP20.9■□□□□ 0.94
UBR4-210ENST00000466969 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
UBR4-210ENST00000466969 BCANQ96GW7 911 aa20.87■□□□□ 0.93
UBR4-210ENST00000466969 DIP2AQ14689 1571 aa20.87■□□□□ 0.93
UBR4-210ENST00000466969 YY1P25490 414 aa20.86■□□□□ 0.93
UBR4-210ENST00000466969 CADPS2Q86UW7 1296 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms