RNA–Protein interactions for RNA: ENST00000466910.5

SRRM1-206, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 799 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-206ENST00000466910 FAM135AQ9P2D6 1515 aa30.17■■■□□ 2.42
SRRM1-206ENST00000466910 PKD2Q13563 968 aa30.15■■■□□ 2.42
SRRM1-206ENST00000466910 MYO3AQ8NEV4 1616 aa30.14■■■□□ 2.42
SRRM1-206ENST00000466910 MAST1Q9Y2H9 1570 aa30.14■■■□□ 2.42
SRRM1-206ENST00000466910 NCKAP5LQ9HCH0 1330 aa30.14■■■□□ 2.42
SRRM1-206ENST00000466910 CEP170BQ9Y4F5 1589 aaPredicted RBP30.13■■■□□ 2.41
SRRM1-206ENST00000466910 FBXO31Q5XUX0 539 aaPredicted RBP30.12■■■□□ 2.41
SRRM1-206ENST00000466910 TNRQ92752 1358 aa30.11■■■□□ 2.41
SRRM1-206ENST00000466910 PLA2R1Q13018 1463 aa30.11■■■□□ 2.41
SRRM1-206ENST00000466910 PZPP20742 1482 aa30.1■■■□□ 2.41
SRRM1-206ENST00000466910 ZNF142P52746 1687 aaPredicted RBP30.09■■■□□ 2.41
SRRM1-206ENST00000466910 A2ML1A8K2U0 1454 aa30.08■■■□□ 2.41
SRRM1-206ENST00000466910 TCOF1Q13428 1488 aaKnown RBP30.02■■■□□ 2.4
SRRM1-206ENST00000466910 ABCC5O15440 1437 aa30.02■■■□□ 2.4
SRRM1-206ENST00000466910 DUOX2Q9NRD8 1548 aa30.01■■■□□ 2.4
SRRM1-206ENST00000466910 PTPN23Q9H3S7 1636 aa30.01■■■□□ 2.39
SRRM1-206ENST00000466910 FGD6Q6ZV73 1430 aa30.01■■■□□ 2.39
SRRM1-206ENST00000466910 RRP7BPQ9NSQ0 103 aa30■■■□□ 2.39
SRRM1-206ENST00000466910 KIF15Q9NS87 1388 aa30■■■□□ 2.39
SRRM1-206ENST00000466910 RNF17Q9BXT8 1623 aaKnown RBP30■■■□□ 2.39
SRRM1-206ENST00000466910 EIF2AK4Q9P2K8 1649 aaKnown RBP30■■■□□ 2.39
SRRM1-206ENST00000466910 SHANK2Q9UPX8 1470 aa29.99■■■□□ 2.39
SRRM1-206ENST00000466910 DNMT1P26358 1616 aaKnown RBP29.99■■■□□ 2.39
SRRM1-206ENST00000466910 THEMISQ8N1K5 641 aaPredicted RBP29.98■■■□□ 2.39
SRRM1-206ENST00000466910 LTBP4Q8N2S1 1624 aa29.97■■■□□ 2.39
SRRM1-206ENST00000466910 DAPK1P53355 1430 aa29.96■■■□□ 2.39
SRRM1-206ENST00000466910 ABCC3O15438 1527 aa29.96■■■□□ 2.39
SRRM1-206ENST00000466910 NLRP1Q9C000 1473 aa29.96■■■□□ 2.39
SRRM1-206ENST00000466910 ZNF335Q9H4Z2 1342 aaPredicted RBP29.95■■■□□ 2.38
SRRM1-206ENST00000466910 ANKLE2Q86XL3 938 aa29.93■■■□□ 2.38
SRRM1-206ENST00000466910 ERBINQ96RT1 1412 aa29.93■■■□□ 2.38
SRRM1-206ENST00000466910 ZC3H13Q5T200 1668 aaKnown RBP29.92■■■□□ 2.38
SRRM1-206ENST00000466910 IQSEC2Q5JU85 1478 aa29.91■■■□□ 2.38
SRRM1-206ENST00000466910 ANKRD30AQ9BXX3 1397 aa29.9■■■□□ 2.38
SRRM1-206ENST00000466910 CHIC2Q9UKJ5 165 aa29.9■■■□□ 2.38
SRRM1-206ENST00000466910 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.9■■■□□ 2.38
SRRM1-206ENST00000466910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.88■■■□□ 2.373e-10■■■■□ 24.3
SRRM1-206ENST00000466910 UGGT1Q9NYU2 1555 aa29.88■■■□□ 2.37
SRRM1-206ENST00000466910 CROCC2H7BZ55 1655 aa29.88■■■□□ 2.37
SRRM1-206ENST00000466910 MROH1Q8NDA8 1641 aa29.86■■■□□ 2.37
SRRM1-206ENST00000466910 FAM50AQ14320 339 aaKnown RBP29.86■■■□□ 2.37
SRRM1-206ENST00000466910 KANK1Q14678 1352 aa29.85■■■□□ 2.37
SRRM1-206ENST00000466910 ERVK-7P63135 1459 aa29.85■■■□□ 2.37
SRRM1-206ENST00000466910 SPATA31D1Q6ZQQ2 1576 aa29.85■■■□□ 2.37
SRRM1-206ENST00000466910 PRDM15P57071 1507 aaPredicted RBP29.81■■■□□ 2.36
SRRM1-206ENST00000466910 ARHGAP31Q2M1Z3 1444 aa29.79■■■□□ 2.36
SRRM1-206ENST00000466910 CEP152O94986 1710 aa29.78■■■□□ 2.36
SRRM1-206ENST00000466910 POLR1AO95602 1720 aaPredicted RBP29.77■■■□□ 2.36
SRRM1-206ENST00000466910 NEURL4Q96JN8 1562 aa29.77■■■□□ 2.36
SRRM1-206ENST00000466910 UBAP1LF5GYI3 381 aa29.76■■■□□ 2.35
SRRM1-206ENST00000466910 NPHP4O75161 1426 aaPredicted RBP29.75■■■□□ 2.35
SRRM1-206ENST00000466910 MED14O60244 1454 aa29.74■■■□□ 2.35
SRRM1-206ENST00000466910 DEPDC5O75140 1603 aa29.71■■■□□ 2.35
SRRM1-206ENST00000466910 ADGRL2O95490 1459 aa29.71■■■□□ 2.35
SRRM1-206ENST00000466910 CPS1P31327 1500 aa29.68■■■□□ 2.34
SRRM1-206ENST00000466910 STAG3Q9UJ98 1225 aa29.68■■■□□ 2.34
SRRM1-206ENST00000466910 CFAP65Q6ZU64 1925 aaKnown RBP29.67■■■□□ 2.34
SRRM1-206ENST00000466910 ANKRD50Q9ULJ7 1429 aa29.66■■■□□ 2.34
SRRM1-206ENST00000466910 LMTK2Q8IWU2 1503 aa29.66■■■□□ 2.34
SRRM1-206ENST00000466910 TXNDC2Q86VQ3 553 aa29.64■■■□□ 2.34
SRRM1-206ENST00000466910 EID1Q9Y6B2 187 aa29.64■■■□□ 2.34
SRRM1-206ENST00000466910 VWDEQ8N2E2 1590 aa29.61■■■□□ 2.33
SRRM1-206ENST00000466910 IQGAP1P46940 1657 aa29.61■■■□□ 2.33
SRRM1-206ENST00000466910 TOM1O60784 492 aa29.61■■■□□ 2.33
SRRM1-206ENST00000466910 UBR1Q8IWV7 1749 aa29.61■■■□□ 2.33
SRRM1-206ENST00000466910 SCAF11Q99590 1463 aaKnown RBP29.61■■■□□ 2.33
SRRM1-206ENST00000466910 LTKP29376 864 aa29.59■■■□□ 2.33
SRRM1-206ENST00000466910 IDI1Q13907 227 aa29.59■■■□□ 2.33
SRRM1-206ENST00000466910 SLIT1O75093 1534 aa29.57■■■□□ 2.32
SRRM1-206ENST00000466910 ARHGAP23Q9P227 1491 aa29.57■■■□□ 2.32
SRRM1-206ENST00000466910 DISP3Q9P2K9 1392 aa29.56■■■□□ 2.32
SRRM1-206ENST00000466910 SCAF1Q9H7N4 1312 aaKnown RBP29.56■■■□□ 2.32
SRRM1-206ENST00000466910 TMEM2Q9UHN6 1383 aa29.55■■■□□ 2.32
SRRM1-206ENST00000466910 SLC52A1Q9NWF4 448 aa29.55■■■□□ 2.32
SRRM1-206ENST00000466910 PPARGC1BQ86YN6 1023 aaKnown RBP29.54■■■□□ 2.32
SRRM1-206ENST00000466910 EFCAB6Q5THR3 1501 aa29.54■■■□□ 2.32
SRRM1-206ENST00000466910 ROCK1Q13464 1354 aa29.53■■■□□ 2.32
SRRM1-206ENST00000466910 PIP4K2BP78356 416 aa29.53■■■□□ 2.32
SRRM1-206ENST00000466910 NOS1P29475 1434 aa29.53■■■□□ 2.32
SRRM1-206ENST00000466910 PIK3C2BO00750 1634 aa29.52■■■□□ 2.32
SRRM1-206ENST00000466910 ITGAEP38570 1179 aa29.51■■■□□ 2.31
SRRM1-206ENST00000466910 RPRD2Q5VT52 1461 aaKnown RBP29.5■■■□□ 2.31
SRRM1-206ENST00000466910 SYNMO15061 1565 aa29.46■■■□□ 2.31
SRRM1-206ENST00000466910 KDM5AP29375 1690 aaKnown RBP29.45■■■□□ 2.31
SRRM1-206ENST00000466910 LRRC7Q96NW7 1537 aa29.43■■■□□ 2.3
SRRM1-206ENST00000466910 HSPA1LP34931 641 aa29.4■■■□□ 2.3
SRRM1-206ENST00000466910 TET3O43151 1660 aa29.4■■■□□ 2.3
SRRM1-206ENST00000466910 ADGRB3O60242 1522 aa29.4■■■□□ 2.3
SRRM1-206ENST00000466910 HDGFP51858 240 aaKnown RBP29.39■■■□□ 2.3
SRRM1-206ENST00000466910 BCANQ96GW7 911 aa29.39■■■□□ 2.3
SRRM1-206ENST00000466910 UNC13BO14795 1591 aa29.38■■■□□ 2.29
SRRM1-206ENST00000466910 NUP155O75694 1391 aa29.37■■■□□ 2.29
SRRM1-206ENST00000466910 STRCP1A6NGW2 1772 aa29.36■■■□□ 2.29
SRRM1-206ENST00000466910 SLC26A8Q96RN1 970 aa29.36■■■□□ 2.29
SRRM1-206ENST00000466910 PPP1R15AO75807 674 aaPredicted RBP29.33■■■□□ 2.29
SRRM1-206ENST00000466910 CHGAP10645 457 aaKnown RBP29.33■■■□□ 2.29
SRRM1-206ENST00000466910 KCNA6P17658 529 aa29.32■■■□□ 2.28
SRRM1-206ENST00000466910 GCC2Q8IWJ2 1684 aa29.31■■■□□ 2.28
SRRM1-206ENST00000466910 ILDR2Q71H61 639 aa29.3■■■□□ 2.28
SRRM1-206ENST00000466910 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms