RNA–Protein interactions for RNA: ENST00000466901.5

COPS7B-218, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-218ENST00000466901 WASHC2CQ9Y4E1 1318 aa11.97□□□□□ -0.49
COPS7B-218ENST00000466901 EIF2AK4Q9P2K8 1649 aaKnown RBP11.97□□□□□ -0.49
COPS7B-218ENST00000466901 NCOA1Q15788 1441 aa11.95□□□□□ -0.5
COPS7B-218ENST00000466901 PREX1Q8TCU6 1659 aa11.95□□□□□ -0.5
COPS7B-218ENST00000466901 LMTK3Q96Q04 1460 aa11.95□□□□□ -0.5
COPS7B-218ENST00000466901 ERBINQ96RT1 1412 aa11.94□□□□□ -0.5
COPS7B-218ENST00000466901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.94□□□□□ -0.5
COPS7B-218ENST00000466901 RNF17Q9BXT8 1623 aaKnown RBP11.94□□□□□ -0.5
COPS7B-218ENST00000466901 ITGAEP38570 1179 aa11.94□□□□□ -0.5
COPS7B-218ENST00000466901 KDM5DQ9BY66 1539 aa11.94□□□□□ -0.5
COPS7B-218ENST00000466901 FAM135AQ9P2D6 1515 aa11.94□□□□□ -0.5
COPS7B-218ENST00000466901 ADGRL2O95490 1459 aa11.94□□□□□ -0.5
COPS7B-218ENST00000466901 NPATQ14207 1427 aa11.93□□□□□ -0.5
COPS7B-218ENST00000466901 UHRF1BP1Q6BDS2 1440 aa11.93□□□□□ -0.5
COPS7B-218ENST00000466901 HSPA2P54652 639 aa11.92□□□□□ -0.5
COPS7B-218ENST00000466901 PTPRKQ15262 1439 aa11.92□□□□□ -0.5
COPS7B-218ENST00000466901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.5
COPS7B-218ENST00000466901 RRBP1Q9P2E9 1410 aaKnown RBP11.91□□□□□ -0.5
COPS7B-218ENST00000466901 ZC3H13Q5T200 1668 aaKnown RBP11.9□□□□□ -0.5
COPS7B-218ENST00000466901 ROCK1Q13464 1354 aa11.9□□□□□ -0.5
COPS7B-218ENST00000466901 KANK1Q14678 1352 aa11.9□□□□□ -0.5
COPS7B-218ENST00000466901 MROH1Q8NDA8 1641 aa11.89□□□□□ -0.51
COPS7B-218ENST00000466901 ANKRD50Q9ULJ7 1429 aa11.89□□□□□ -0.51
COPS7B-218ENST00000466901 FBXO31Q5XUX0 539 aaPredicted RBP11.89□□□□□ -0.51
COPS7B-218ENST00000466901 ABCC3O15438 1527 aa11.89□□□□□ -0.51
COPS7B-218ENST00000466901 PZPP20742 1482 aa11.89□□□□□ -0.51
COPS7B-218ENST00000466901 CEP152O94986 1710 aa11.88□□□□□ -0.51
COPS7B-218ENST00000466901 PRDM15P57071 1507 aaPredicted RBP11.87□□□□□ -0.51
COPS7B-218ENST00000466901 DEPDC5O75140 1603 aa11.87□□□□□ -0.51
COPS7B-218ENST00000466901 CFAP65Q6ZU64 1925 aaKnown RBP11.87□□□□□ -0.51
COPS7B-218ENST00000466901 TNRQ92752 1358 aa11.85□□□□□ -0.51
COPS7B-218ENST00000466901 CAMSAP1Q5T5Y3 1602 aa11.85□□□□□ -0.51
COPS7B-218ENST00000466901 MYO3AQ8NEV4 1616 aa11.85□□□□□ -0.51
COPS7B-218ENST00000466901 DMRT2Q9Y5R5 561 aa11.83□□□□□ -0.52
COPS7B-218ENST00000466901 ZNF142P52746 1687 aaPredicted RBP11.83□□□□□ -0.52
COPS7B-218ENST00000466901 ARHGAP31Q2M1Z3 1444 aa11.83□□□□□ -0.52
COPS7B-218ENST00000466901 CEP170BQ9Y4F5 1589 aaPredicted RBP11.83□□□□□ -0.52
COPS7B-218ENST00000466901 VWDEQ8N2E2 1590 aa11.82□□□□□ -0.52
COPS7B-218ENST00000466901 A2ML1A8K2U0 1454 aa11.82□□□□□ -0.52
COPS7B-218ENST00000466901 LMTK2Q8IWU2 1503 aa11.81□□□□□ -0.52
COPS7B-218ENST00000466901 SPATA31D1Q6ZQQ2 1576 aa11.81□□□□□ -0.52
COPS7B-218ENST00000466901 STRCQ7RTU9 1775 aa11.81□□□□□ -0.52
COPS7B-218ENST00000466901 ERVK-7P63135 1459 aa11.81□□□□□ -0.52
COPS7B-218ENST00000466901 NLRP1Q9C000 1473 aa11.81□□□□□ -0.52
COPS7B-218ENST00000466901 UNC13BO14795 1591 aa11.79□□□□□ -0.52
COPS7B-218ENST00000466901 THEMISQ8N1K5 641 aaPredicted RBP11.79□□□□□ -0.52
COPS7B-218ENST00000466901 NUP155O75694 1391 aa11.79□□□□□ -0.52
COPS7B-218ENST00000466901 EFCAB6Q5THR3 1501 aa11.78□□□□□ -0.52
COPS7B-218ENST00000466901 PKD2Q13563 968 aa11.78□□□□□ -0.52
COPS7B-218ENST00000466901 NAIPQ13075 1403 aa11.77□□□□□ -0.52
COPS7B-218ENST00000466901 UGGT1Q9NYU2 1555 aa11.77□□□□□ -0.53
COPS7B-218ENST00000466901 NCKAP5LQ9HCH0 1330 aa11.77□□□□□ -0.53
COPS7B-218ENST00000466901 TET3O43151 1660 aa11.77□□□□□ -0.53
COPS7B-218ENST00000466901 HFM1A2PYH4 1435 aa11.77□□□□□ -0.53
COPS7B-218ENST00000466901 PLA2R1Q13018 1463 aa11.76□□□□□ -0.53
COPS7B-218ENST00000466901 GCC2Q8IWJ2 1684 aa11.76□□□□□ -0.53
COPS7B-218ENST00000466901 PTPRTO14522 1441 aa11.76□□□□□ -0.53
COPS7B-218ENST00000466901 RPRD2Q5VT52 1461 aaKnown RBP11.76□□□□□ -0.53
COPS7B-218ENST00000466901 IQGAP3Q86VI3 1631 aa11.75□□□□□ -0.53
COPS7B-218ENST00000466901 ANKLE2Q86XL3 938 aa11.75□□□□□ -0.53
COPS7B-218ENST00000466901 STAG3Q9UJ98 1225 aa11.75□□□□□ -0.53
COPS7B-218ENST00000466901 IDI1Q13907 227 aa11.74□□□□□ -0.53
COPS7B-218ENST00000466901 SLC52A1Q9NWF4 448 aa11.74□□□□□ -0.53
COPS7B-218ENST00000466901 NOS1P29475 1434 aa11.73□□□□□ -0.53
COPS7B-218ENST00000466901 TRIM52Q96A61 297 aa11.73□□□□□ -0.53
COPS7B-218ENST00000466901 UBR1Q8IWV7 1749 aa11.72□□□□□ -0.53
COPS7B-218ENST00000466901 E9PCH4 1651 aa11.72□□□□□ -0.53
COPS7B-218ENST00000466901 POLR1AO95602 1720 aaPredicted RBP11.72□□□□□ -0.53
COPS7B-218ENST00000466901 SYNMO15061 1565 aa11.71□□□□□ -0.53
COPS7B-218ENST00000466901 PIK3C2BO00750 1634 aa11.71□□□□□ -0.54
COPS7B-218ENST00000466901 KDM5AP29375 1690 aaKnown RBP11.69□□□□□ -0.54
COPS7B-218ENST00000466901 EID1Q9Y6B2 187 aa11.69□□□□□ -0.54
COPS7B-218ENST00000466901 TXNDC2Q86VQ3 553 aa11.68□□□□□ -0.54
COPS7B-218ENST00000466901 NEURL4Q96JN8 1562 aa11.67□□□□□ -0.54
COPS7B-218ENST00000466901 ACIN1Q9UKV3 1341 aaKnown RBP11.67□□□□□ -0.54
COPS7B-218ENST00000466901 SLIT1O75093 1534 aa11.67□□□□□ -0.54
COPS7B-218ENST00000466901 CERKQ8TCT0 537 aa11.67□□□□□ -0.54
COPS7B-218ENST00000466901 SLC4A1APQ9BWU0 796 aaKnown RBP11.67□□□□□ -0.54
COPS7B-218ENST00000466901 NPHP4O75161 1426 aaPredicted RBP11.67□□□□□ -0.54
COPS7B-218ENST00000466901 SETD5Q9C0A6 1442 aa11.67□□□□□ -0.54
COPS7B-218ENST00000466901 TMEM2Q9UHN6 1383 aa11.67□□□□□ -0.54
COPS7B-218ENST00000466901 ADGRB3O60242 1522 aa11.66□□□□□ -0.54
COPS7B-218ENST00000466901 MED14O60244 1454 aa11.66□□□□□ -0.54
COPS7B-218ENST00000466901 SCAF11Q99590 1463 aaKnown RBP11.66□□□□□ -0.54
COPS7B-218ENST00000466901 ARHGAP23Q9P227 1491 aa11.66□□□□□ -0.54
COPS7B-218ENST00000466901 CHGAP10645 457 aaKnown RBP11.66□□□□□ -0.54
COPS7B-218ENST00000466901 LTKP29376 864 aa11.66□□□□□ -0.54
COPS7B-218ENST00000466901 HDGFP51858 240 aaKnown RBP11.65□□□□□ -0.54
COPS7B-218ENST00000466901 SPHKAPQ2M3C7 1700 aa11.65□□□□□ -0.54
COPS7B-218ENST00000466901 IQGAP1P46940 1657 aa11.65□□□□□ -0.55
COPS7B-218ENST00000466901 ZNF335Q9H4Z2 1342 aaPredicted RBP11.64□□□□□ -0.55
COPS7B-218ENST00000466901 MYO5BQ9ULV0 1848 aa11.64□□□□□ -0.55
COPS7B-218ENST00000466901 TMEM131LA2VDJ0 1609 aa11.64□□□□□ -0.55
COPS7B-218ENST00000466901 LTBP4Q8N2S1 1624 aa11.62□□□□□ -0.55
COPS7B-218ENST00000466901 PPP1R15AO75807 674 aaPredicted RBP11.62□□□□□ -0.55
COPS7B-218ENST00000466901 ILDR1Q86SU0 546 aaPredicted RBP11.62□□□□□ -0.55
COPS7B-218ENST00000466901 FBXO41Q8TF61 875 aa11.62□□□□□ -0.55
COPS7B-218ENST00000466901 MPHOSPH9Q99550 1183 aa11.62□□□□□ -0.55
COPS7B-218ENST00000466901 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.61□□□□□ -0.55
COPS7B-218ENST00000466901 BCANQ96GW7 911 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms