RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 C6orf132Q5T0Z8 1188 aa9.8□□□□□ -0.84
EDEM3-205ENST00000466606 GPIHBP1Q8IV16 184 aa9.79□□□□□ -0.84
EDEM3-205ENST00000466606 AXIN2Q9Y2T1 843 aa9.79□□□□□ -0.84
EDEM3-205ENST00000466606 TPRNQ4KMQ1 711 aa9.78□□□□□ -0.84
EDEM3-205ENST00000466606 KCNK17Q96T54 332 aa9.78□□□□□ -0.84
EDEM3-205ENST00000466606 PRKCSHP14314 528 aaPredicted RBP9.77□□□□□ -0.85
EDEM3-205ENST00000466606 PSEN2P49810 448 aa9.77□□□□□ -0.85
EDEM3-205ENST00000466606 POTEGQ6S5H5 508 aa9.77□□□□□ -0.85
EDEM3-205ENST00000466606 POTEEQ6S8J3 1075 aa9.77□□□□□ -0.85
EDEM3-205ENST00000466606 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
EDEM3-205ENST00000466606 PCDH10Q9P2E7 1040 aa9.77□□□□□ -0.85
EDEM3-205ENST00000466606 COL9A1P20849 921 aa9.76□□□□□ -0.85
EDEM3-205ENST00000466606 PTPREP23469 700 aa9.75□□□□□ -0.85
EDEM3-205ENST00000466606 ZNF687Q8N1G0 1237 aa9.75□□□□□ -0.85
EDEM3-205ENST00000466606 ZC3H15Q8WU90 426 aaKnown RBP9.75□□□□□ -0.85
EDEM3-205ENST00000466606 GPR37O15354 613 aa9.74□□□□□ -0.85
EDEM3-205ENST00000466606 NPDC1Q9NQX5 325 aaPredicted RBP9.74□□□□□ -0.85
EDEM3-205ENST00000466606 FCHSD2O94868 740 aa9.72□□□□□ -0.85
EDEM3-205ENST00000466606 PTGDRQ13258 359 aa9.72□□□□□ -0.85
EDEM3-205ENST00000466606 DMRTA1Q5VZB9 504 aa9.72□□□□□ -0.85
EDEM3-205ENST00000466606 ARHGAP33O14559 1287 aa9.71□□□□□ -0.86
EDEM3-205ENST00000466606 FECHP22830 423 aa9.7□□□□□ -0.86
EDEM3-205ENST00000466606 PPP1R3GB7ZBB8 358 aa9.69□□□□□ -0.86
EDEM3-205ENST00000466606 KCNH8Q96L42 1107 aa9.69□□□□□ -0.86
EDEM3-205ENST00000466606 PROX2Q3B8N5 592 aa9.68□□□□□ -0.86
EDEM3-205ENST00000466606 GNPATO15228 680 aa9.67□□□□□ -0.86
EDEM3-205ENST00000466606 ZMYND10O75800 440 aa9.67□□□□□ -0.86
EDEM3-205ENST00000466606 PBX2P40425 430 aa9.67□□□□□ -0.86
EDEM3-205ENST00000466606 PADI6Q6TGC4 694 aa9.67□□□□□ -0.86
EDEM3-205ENST00000466606 HIC1Q14526 733 aa9.66□□□□□ -0.86
EDEM3-205ENST00000466606 CDAN1Q8IWY9 1227 aa9.66□□□□□ -0.86
EDEM3-205ENST00000466606 CDCA7LQ96GN5 454 aa9.66□□□□□ -0.86
EDEM3-205ENST00000466606 PRSS12P56730 875 aa9.65□□□□□ -0.86
EDEM3-205ENST00000466606 FAM161AQ3B820 660 aa9.65□□□□□ -0.86
EDEM3-205ENST00000466606 CERKQ8TCT0 537 aa9.65□□□□□ -0.86
EDEM3-205ENST00000466606 ZBED2Q9BTP6 218 aa9.65□□□□□ -0.86
EDEM3-205ENST00000466606 FAM198AQ9UFP1 575 aa9.65□□□□□ -0.86
EDEM3-205ENST00000466606 ANKRD13DQ6ZTN6 518 aa9.64□□□□□ -0.87
EDEM3-205ENST00000466606 KRI1Q8N9T8 703 aaKnown RBP9.64□□□□□ -0.87
EDEM3-205ENST00000466606 KRTAP3-3Q9BYR6 98 aa9.64□□□□□ -0.87
EDEM3-205ENST00000466606 KRTAP3-2Q9BYR7 98 aa9.64□□□□□ -0.87
EDEM3-205ENST00000466606 TSKSQ9UJT2 592 aa9.64□□□□□ -0.87
EDEM3-205ENST00000466606 LSM11P83369 360 aaKnown RBP eCLIP9.63□□□□□ -0.87
EDEM3-205ENST00000466606 BARGINQ6ZT62 677 aa9.63□□□□□ -0.87
EDEM3-205ENST00000466606 SLC24A3Q9HC58 644 aa9.63□□□□□ -0.87
EDEM3-205ENST00000466606 C3orf80F5H4A9 247 aa9.62□□□□□ -0.87
EDEM3-205ENST00000466606 TRIM6-TRIM34B2RNG4 842 aa9.61□□□□□ -0.87
EDEM3-205ENST00000466606 KIAA1468Q9P260 1216 aa9.6□□□□□ -0.87
EDEM3-205ENST00000466606 VPS9D1Q9Y2B5 631 aa9.6□□□□□ -0.87
EDEM3-205ENST00000466606 SMAPO00193 183 aa9.59□□□□□ -0.87
EDEM3-205ENST00000466606 TTC13Q8NBP0 860 aa9.59□□□□□ -0.87
EDEM3-205ENST00000466606 MAP2K5Q13163 448 aa9.58□□□□□ -0.88
EDEM3-205ENST00000466606 ADGRD1Q6QNK2 874 aa9.58□□□□□ -0.88
EDEM3-205ENST00000466606 RBM27Q9P2N5 1060 aaKnown RBP9.58□□□□□ -0.88
EDEM3-205ENST00000466606 IRF6O14896 467 aa9.57□□□□□ -0.88
EDEM3-205ENST00000466606 NUDT18Q6ZVK8 323 aa9.57□□□□□ -0.88
EDEM3-205ENST00000466606 PACS2Q86VP3 889 aa9.57□□□□□ -0.88
EDEM3-205ENST00000466606 CCDC102AQ96A19 550 aa9.57□□□□□ -0.88
EDEM3-205ENST00000466606 SLC4A5Q9BY07 1137 aa9.57□□□□□ -0.88
EDEM3-205ENST00000466606 PNMA3Q9UL41 463 aa9.57□□□□□ -0.88
EDEM3-205ENST00000466606 SEPT9Q9UHD8 586 aaPredicted RBP9.56□□□□□ -0.88
EDEM3-205ENST00000466606 ADGRG1Q9Y653 693 aa9.56□□□□□ -0.88
EDEM3-205ENST00000466606 MINK1Q8N4C8 1332 aaPredicted RBP9.56□□□□□ -0.88
EDEM3-205ENST00000466606 TATDN2Q93075 761 aa9.55□□□□□ -0.88
EDEM3-205ENST00000466606 TK2O00142 265 aa9.54□□□□□ -0.88
EDEM3-205ENST00000466606 NLRP7Q8WX94 980 aa9.54□□□□□ -0.88
EDEM3-205ENST00000466606 RABGEF1Q9UJ41 708 aa9.54□□□□□ -0.88
EDEM3-205ENST00000466606 NBPF26B4DH59 902 aa9.53□□□□□ -0.88
EDEM3-205ENST00000466606 ONECUT3O60422 494 aaPredicted RBP9.53□□□□□ -0.88
EDEM3-205ENST00000466606 AK7Q96M32 723 aa9.52□□□□□ -0.89
EDEM3-205ENST00000466606 PHOX2BQ99453 314 aa9.52□□□□□ -0.89
EDEM3-205ENST00000466606 BHMG1C9JSJ3 638 aaPredicted RBP9.51□□□□□ -0.89
EDEM3-205ENST00000466606 HRO43593 1189 aa9.51□□□□□ -0.89
EDEM3-205ENST00000466606 EYA1Q99502 592 aa9.51□□□□□ -0.89
EDEM3-205ENST00000466606 METTL3Q86U44 580 aaKnown RBP9.5□□□□□ -0.89
EDEM3-205ENST00000466606 RBM46Q8TBY0 533 aaKnown RBP9.5□□□□□ -0.89
EDEM3-205ENST00000466606 PXYLP1Q8TE99 480 aa9.5□□□□□ -0.89
EDEM3-205ENST00000466606 TRIM66O15016 1216 aa9.49□□□□□ -0.89
EDEM3-205ENST00000466606 OATP04181 439 aa9.49□□□□□ -0.89
EDEM3-205ENST00000466606 MRPL50Q8N5N7 158 aaKnown RBP9.49□□□□□ -0.89
EDEM3-205ENST00000466606 STAC3Q96MF2 364 aa9.49□□□□□ -0.89
EDEM3-205ENST00000466606 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
EDEM3-205ENST00000466606 RCCD1A6NED2 376 aa9.47□□□□□ -0.89
EDEM3-205ENST00000466606 MDM2Q00987 491 aaPredicted RBP9.45□□□□□ -0.9
EDEM3-205ENST00000466606 FAM98CQ17RN3 349 aaKnown RBP9.45□□□□□ -0.9
EDEM3-205ENST00000466606 PDE4DQ08499 809 aa9.44□□□□□ -0.9
EDEM3-205ENST00000466606 ZFRQ96KR1 1074 aaKnown RBP9.44□□□□□ -0.9
EDEM3-205ENST00000466606 GOLGA8CPA6NN73 597 aa9.43□□□□□ -0.9
EDEM3-205ENST00000466606 DNAJB2P25686 324 aa9.43□□□□□ -0.9
EDEM3-205ENST00000466606 SWT1Q5T5J6 900 aaKnown RBP9.43□□□□□ -0.9
EDEM3-205ENST00000466606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.42□□□□□ -0.9
EDEM3-205ENST00000466606 TTLL12Q14166 644 aaPredicted RBP9.42□□□□□ -0.9
EDEM3-205ENST00000466606 SAMD7Q7Z3H4 446 aa9.42□□□□□ -0.9
EDEM3-205ENST00000466606 LAPTM4BQ86VI4 370 aa9.42□□□□□ -0.9
EDEM3-205ENST00000466606 REPIN1Q9BWE0 567 aaKnown RBP9.42□□□□□ -0.9
EDEM3-205ENST00000466606 TMEM134Q9H6X4 195 aa9.41□□□□□ -0.9
EDEM3-205ENST00000466606 GPBP1L1Q9HC44 474 aaPredicted RBP9.41□□□□□ -0.9
EDEM3-205ENST00000466606 RNF40O75150 1001 aa9.4□□□□□ -0.9
EDEM3-205ENST00000466606 AMHR2Q16671 573 aa9.4□□□□□ -0.9
EDEM3-205ENST00000466606 SPNS2Q8IVW8 549 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms