RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 FAM135AQ9P2D6 1515 aa24.65■■□□□ 1.54
CRAMP1-204ENST00000466562 RRP7BPQ9NSQ0 103 aa24.63■■□□□ 1.53
CRAMP1-204ENST00000466562 DNMT1P26358 1616 aaKnown RBP24.63■■□□□ 1.53
CRAMP1-204ENST00000466562 KIF15Q9NS87 1388 aa24.63■■□□□ 1.53
CRAMP1-204ENST00000466562 DUOX2Q9NRD8 1548 aa24.62■■□□□ 1.53
CRAMP1-204ENST00000466562 DMRT2Q9Y5R5 561 aa24.61■■□□□ 1.53
CRAMP1-204ENST00000466562 CROCC2H7BZ55 1655 aa24.61■■□□□ 1.53
CRAMP1-204ENST00000466562 FBXO31Q5XUX0 539 aaPredicted RBP24.6■■□□□ 1.53
CRAMP1-204ENST00000466562 EIF2AK4Q9P2K8 1649 aaKnown RBP24.6■■□□□ 1.53
CRAMP1-204ENST00000466562 STRCQ7RTU9 1775 aa24.59■■□□□ 1.53
CRAMP1-204ENST00000466562 CHIC2Q9UKJ5 165 aa24.59■■□□□ 1.53
CRAMP1-204ENST00000466562 RNF17Q9BXT8 1623 aaKnown RBP24.59■■□□□ 1.53
CRAMP1-204ENST00000466562 PZPP20742 1482 aa24.58■■□□□ 1.53
CRAMP1-204ENST00000466562 FAM50AQ14320 339 aaKnown RBP24.58■■□□□ 1.53
CRAMP1-204ENST00000466562 MYO3AQ8NEV4 1616 aa24.57■■□□□ 1.52
CRAMP1-204ENST00000466562 NCOA1Q15788 1441 aa24.56■■□□□ 1.52
CRAMP1-204ENST00000466562 ERBINQ96RT1 1412 aa24.56■■□□□ 1.52
CRAMP1-204ENST00000466562 ANKRD30AQ9BXX3 1397 aa24.55■■□□□ 1.52
CRAMP1-204ENST00000466562 MROH1Q8NDA8 1641 aa24.54■■□□□ 1.52
CRAMP1-204ENST00000466562 ABCC3O15438 1527 aa24.54■■□□□ 1.52
CRAMP1-204ENST00000466562 TNRQ92752 1358 aa24.54■■□□□ 1.52
CRAMP1-204ENST00000466562 CAMSAP1Q5T5Y3 1602 aa24.53■■□□□ 1.52
CRAMP1-204ENST00000466562 CEP170BQ9Y4F5 1589 aaPredicted RBP24.53■■□□□ 1.52
CRAMP1-204ENST00000466562 PTPRTO14522 1441 aa24.52■■□□□ 1.52
CRAMP1-204ENST00000466562 PPARGC1BQ86YN6 1023 aaKnown RBP24.52■■□□□ 1.52
CRAMP1-204ENST00000466562 ZNF142P52746 1687 aaPredicted RBP24.52■■□□□ 1.52
CRAMP1-204ENST00000466562 A2ML1A8K2U0 1454 aa24.5■■□□□ 1.51
CRAMP1-204ENST00000466562 FBXO41Q8TF61 875 aa24.49■■□□□ 1.51
CRAMP1-204ENST00000466562 ADGRL2O95490 1459 aa24.49■■□□□ 1.51
CRAMP1-204ENST00000466562 ZC3H13Q5T200 1668 aaKnown RBP24.49■■□□□ 1.51
CRAMP1-204ENST00000466562 NCKAP5LQ9HCH0 1330 aa24.48■■□□□ 1.51
CRAMP1-204ENST00000466562 PLA2R1Q13018 1463 aa24.47■■□□□ 1.51
CRAMP1-204ENST00000466562 PRDM15P57071 1507 aaPredicted RBP24.46■■□□□ 1.51
CRAMP1-204ENST00000466562 CERKQ8TCT0 537 aa24.46■■□□□ 1.51
CRAMP1-204ENST00000466562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.46■■□□□ 1.51
CRAMP1-204ENST00000466562 PKD2Q13563 968 aa24.45■■□□□ 1.5
CRAMP1-204ENST00000466562 NLRP1Q9C000 1473 aa24.43■■□□□ 1.5
CRAMP1-204ENST00000466562 DEPDC5O75140 1603 aa24.42■■□□□ 1.5
CRAMP1-204ENST00000466562 SPATA31D1Q6ZQQ2 1576 aa24.42■■□□□ 1.5
CRAMP1-204ENST00000466562 CEP152O94986 1710 aa24.41■■□□□ 1.5
CRAMP1-204ENST00000466562 ERVK-7P63135 1459 aa24.41■■□□□ 1.5
CRAMP1-204ENST00000466562 KANK1Q14678 1352 aa24.41■■□□□ 1.5
CRAMP1-204ENST00000466562 ARHGAP31Q2M1Z3 1444 aa24.4■■□□□ 1.5
CRAMP1-204ENST00000466562 ANKRD50Q9ULJ7 1429 aa24.38■■□□□ 1.49
CRAMP1-204ENST00000466562 THEMISQ8N1K5 641 aaPredicted RBP24.38■■□□□ 1.49
CRAMP1-204ENST00000466562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.36■■□□□ 1.49
CRAMP1-204ENST00000466562 UGGT1Q9NYU2 1555 aa24.36■■□□□ 1.49
CRAMP1-204ENST00000466562 VWDEQ8N2E2 1590 aa24.35■■□□□ 1.49
CRAMP1-204ENST00000466562 LMTK2Q8IWU2 1503 aa24.35■■□□□ 1.49
CRAMP1-204ENST00000466562 ROCK1Q13464 1354 aa24.34■■□□□ 1.49
CRAMP1-204ENST00000466562 ITGAEP38570 1179 aa24.32■■□□□ 1.48
CRAMP1-204ENST00000466562 ANKLE2Q86XL3 938 aa24.32■■□□□ 1.48
CRAMP1-204ENST00000466562 LTBP4Q8N2S1 1624 aa24.32■■□□□ 1.48
CRAMP1-204ENST00000466562 ZNF335Q9H4Z2 1342 aaPredicted RBP24.29■■□□□ 1.48
CRAMP1-204ENST00000466562 CFAP65Q6ZU64 1925 aaKnown RBP24.27■■□□□ 1.48
CRAMP1-204ENST00000466562 NEURL4Q96JN8 1562 aa24.27■■□□□ 1.48
CRAMP1-204ENST00000466562 RRBP1Q9P2E9 1410 aaKnown RBP24.26■■□□□ 1.47
CRAMP1-204ENST00000466562 EFCAB6Q5THR3 1501 aa24.24■■□□□ 1.47
CRAMP1-204ENST00000466562 POLR1AO95602 1720 aaPredicted RBP24.24■■□□□ 1.47
CRAMP1-204ENST00000466562 MED14O60244 1454 aa24.22■■□□□ 1.47
CRAMP1-204ENST00000466562 NPHP4O75161 1426 aaPredicted RBP24.21■■□□□ 1.47
CRAMP1-204ENST00000466562 NOS1P29475 1434 aa24.21■■□□□ 1.47
CRAMP1-204ENST00000466562 IDI1Q13907 227 aa24.21■■□□□ 1.47
CRAMP1-204ENST00000466562 UBR1Q8IWV7 1749 aa24.21■■□□□ 1.47
CRAMP1-204ENST00000466562 UNC13BO14795 1591 aa24.2■■□□□ 1.46
CRAMP1-204ENST00000466562 IQSEC2Q5JU85 1478 aa24.18■■□□□ 1.46
CRAMP1-204ENST00000466562 RPRD2Q5VT52 1461 aaKnown RBP24.18■■□□□ 1.46
CRAMP1-204ENST00000466562 SYNMO15061 1565 aa24.17■■□□□ 1.46
CRAMP1-204ENST00000466562 STAG3Q9UJ98 1225 aa24.17■■□□□ 1.46
CRAMP1-204ENST00000466562 ARHGAP23Q9P227 1491 aa24.16■■□□□ 1.46
CRAMP1-204ENST00000466562 LTKP29376 864 aa24.16■■□□□ 1.46
CRAMP1-204ENST00000466562 PIK3C2BO00750 1634 aa24.16■■□□□ 1.46
CRAMP1-204ENST00000466562 SLIT1O75093 1534 aa24.15■■□□□ 1.46
CRAMP1-204ENST00000466562 TXNDC2Q86VQ3 553 aa24.15■■□□□ 1.46
CRAMP1-204ENST00000466562 SLC52A1Q9NWF4 448 aa24.15■■□□□ 1.46
CRAMP1-204ENST00000466562 TET3O43151 1660 aa24.15■■□□□ 1.46
CRAMP1-204ENST00000466562 NUP155O75694 1391 aa24.14■■□□□ 1.45
CRAMP1-204ENST00000466562 SCAF11Q99590 1463 aaKnown RBP24.13■■□□□ 1.45
CRAMP1-204ENST00000466562 TMEM2Q9UHN6 1383 aa24.13■■□□□ 1.45
CRAMP1-204ENST00000466562 IQGAP1P46940 1657 aa24.11■■□□□ 1.45
CRAMP1-204ENST00000466562 EID1Q9Y6B2 187 aa24.11■■□□□ 1.45
CRAMP1-204ENST00000466562 IQGAP3Q86VI3 1631 aa24.1■■□□□ 1.45
CRAMP1-204ENST00000466562 KDM5AP29375 1690 aaKnown RBP24.08■■□□□ 1.45
CRAMP1-204ENST00000466562 GCC2Q8IWJ2 1684 aa24.08■■□□□ 1.45
CRAMP1-204ENST00000466562 CPS1P31327 1500 aa24.07■■□□□ 1.44
CRAMP1-204ENST00000466562 NAIPQ13075 1403 aa24.07■■□□□ 1.44
CRAMP1-204ENST00000466562 E9PCH4 1651 aa24.05■■□□□ 1.44
CRAMP1-204ENST00000466562 ADGRB3O60242 1522 aa24.05■■□□□ 1.44
CRAMP1-204ENST00000466562 UBAP1LF5GYI3 381 aa24.02■■□□□ 1.44
CRAMP1-204ENST00000466562 HFM1A2PYH4 1435 aa24■■□□□ 1.43
CRAMP1-204ENST00000466562 CHGAP10645 457 aaKnown RBP23.97■■□□□ 1.43
CRAMP1-204ENST00000466562 TMEM131LA2VDJ0 1609 aa23.96■■□□□ 1.43
CRAMP1-204ENST00000466562 ZFYVE9O95405 1425 aa23.95■■□□□ 1.42
CRAMP1-204ENST00000466562 STRCP1A6NGW2 1772 aa23.95■■□□□ 1.42
CRAMP1-204ENST00000466562 HDGFP51858 240 aaKnown RBP23.94■■□□□ 1.42
CRAMP1-204ENST00000466562 SLC26A8Q96RN1 970 aa23.94■■□□□ 1.42
CRAMP1-204ENST00000466562 LRRC7Q96NW7 1537 aa23.94■■□□□ 1.42
CRAMP1-204ENST00000466562 RIMS2Q9UQ26 1411 aa23.93■■□□□ 1.42
CRAMP1-204ENST00000466562 TOM1O60784 492 aa23.92■■□□□ 1.42
CRAMP1-204ENST00000466562 TRIM52Q96A61 297 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 175.2 ms