RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 KDM5DQ9BY66 1539 aa27.45■■□□□ 1.98
CYTH3-205ENST00000466543 RSPH4AQ5TD94 716 aa27.44■■□□□ 1.98
CYTH3-205ENST00000466543 A2ML1A8K2U0 1454 aa27.44■■□□□ 1.98
CYTH3-205ENST00000466543 ZNF335Q9H4Z2 1342 aaPredicted RBP27.43■■□□□ 1.98
CYTH3-205ENST00000466543 PZPP20742 1482 aa27.41■■□□□ 1.98
CYTH3-205ENST00000466543 PKD2Q13563 968 aa27.41■■□□□ 1.98
CYTH3-205ENST00000466543 IQSEC2Q5JU85 1478 aa27.4■■□□□ 1.98
CYTH3-205ENST00000466543 TNRQ92752 1358 aa27.39■■□□□ 1.98
CYTH3-205ENST00000466543 MAP3K1Q13233 1512 aa27.39■■□□□ 1.98
CYTH3-205ENST00000466543 FAM135AQ9P2D6 1515 aa27.39■■□□□ 1.98
CYTH3-205ENST00000466543 MAST1Q9Y2H9 1570 aa27.39■■□□□ 1.97
CYTH3-205ENST00000466543 WASHC2CQ9Y4E1 1318 aa27.37■■□□□ 1.97
CYTH3-205ENST00000466543 TSPY4P0CV99 314 aa27.36■■□□□ 1.97
CYTH3-205ENST00000466543 TSPY10P0CW01 314 aa27.36■■□□□ 1.97
CYTH3-205ENST00000466543 RNF17Q9BXT8 1623 aaKnown RBP27.35■■□□□ 1.97
CYTH3-205ENST00000466543 NEURL4Q96JN8 1562 aa27.35■■□□□ 1.97
CYTH3-205ENST00000466543 MYOM3Q5VTT5 1437 aa27.33■■□□□ 1.97
CYTH3-205ENST00000466543 POLR1AO95602 1720 aaPredicted RBP27.33■■□□□ 1.96
CYTH3-205ENST00000466543 MROH1Q8NDA8 1641 aa27.31■■□□□ 1.96
CYTH3-205ENST00000466543 MIA2Q96PC5 1412 aa27.3■■□□□ 1.96
CYTH3-205ENST00000466543 ABCC3O15438 1527 aa27.3■■□□□ 1.96
CYTH3-205ENST00000466543 EIF2AK4Q9P2K8 1649 aaKnown RBP27.27■■□□□ 1.96
CYTH3-205ENST00000466543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.25■■□□□ 1.95
CYTH3-205ENST00000466543 ZC3H13Q5T200 1668 aaKnown RBP27.24■■□□□ 1.95
CYTH3-205ENST00000466543 NLRP1Q9C000 1473 aa27.24■■□□□ 1.95
CYTH3-205ENST00000466543 CEP152O94986 1710 aa27.24■■□□□ 1.95
CYTH3-205ENST00000466543 DISP3Q9P2K9 1392 aa27.23■■□□□ 1.95
CYTH3-205ENST00000466543 SPATA31D1Q6ZQQ2 1576 aa27.22■■□□□ 1.95
CYTH3-205ENST00000466543 UGGT1Q9NYU2 1555 aa27.22■■□□□ 1.95
CYTH3-205ENST00000466543 UBAP1LF5GYI3 381 aa27.21■■□□□ 1.95
CYTH3-205ENST00000466543 ILDR2Q71H61 639 aa27.21■■□□□ 1.95
CYTH3-205ENST00000466543 CROCC2H7BZ55 1655 aa27.21■■□□□ 1.95
CYTH3-205ENST00000466543 ABCC5O15440 1437 aa27.2■■□□□ 1.94
CYTH3-205ENST00000466543 DUOX2Q9NRD8 1548 aa27.2■■□□□ 1.94
CYTH3-205ENST00000466543 ERVK-7P63135 1459 aa27.19■■□□□ 1.94
CYTH3-205ENST00000466543 PTPN23Q9H3S7 1636 aa27.19■■□□□ 1.94
CYTH3-205ENST00000466543 CFAP65Q6ZU64 1925 aaKnown RBP27.18■■□□□ 1.94
CYTH3-205ENST00000466543 THEMISQ8N1K5 641 aaPredicted RBP27.17■■□□□ 1.94
CYTH3-205ENST00000466543 VWDEQ8N2E2 1590 aa27.17■■□□□ 1.94
CYTH3-205ENST00000466543 DEPDC5O75140 1603 aa27.16■■□□□ 1.94
CYTH3-205ENST00000466543 ANKLE2Q86XL3 938 aa27.16■■□□□ 1.94
CYTH3-205ENST00000466543 SHANK2Q9UPX8 1470 aa27.16■■□□□ 1.94
CYTH3-205ENST00000466543 MED14O60244 1454 aa27.15■■□□□ 1.94
CYTH3-205ENST00000466543 KIF15Q9NS87 1388 aa27.14■■□□□ 1.94
CYTH3-205ENST00000466543 NPHP4O75161 1426 aaPredicted RBP27.13■■□□□ 1.93
CYTH3-205ENST00000466543 PRDM15P57071 1507 aaPredicted RBP27.12■■□□□ 1.93
CYTH3-205ENST00000466543 CPS1P31327 1500 aa27.11■■□□□ 1.93
CYTH3-205ENST00000466543 DAPK1P53355 1430 aa27.11■■□□□ 1.93
CYTH3-205ENST00000466543 RRP7BPQ9NSQ0 103 aa27.11■■□□□ 1.93
CYTH3-205ENST00000466543 IQGAP1P46940 1657 aa27.11■■□□□ 1.93
CYTH3-205ENST00000466543 UBR1Q8IWV7 1749 aa27.1■■□□□ 1.93
CYTH3-205ENST00000466543 FGD6Q6ZV73 1430 aa27.1■■□□□ 1.93
CYTH3-205ENST00000466543 STRCP1A6NGW2 1772 aa27.08■■□□□ 1.93
CYTH3-205ENST00000466543 ERBINQ96RT1 1412 aa27.07■■□□□ 1.92
CYTH3-205ENST00000466543 APLP2Q06481 763 aa27.05■■□□□ 1.92
CYTH3-205ENST00000466543 ALKQ9UM73 1620 aa27.04■■□□□ 1.92
CYTH3-205ENST00000466543 ARHGAP31Q2M1Z3 1444 aa27.03■■□□□ 1.92
CYTH3-205ENST00000466543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.01■■□□□ 1.91
CYTH3-205ENST00000466543 PIP4K2BP78356 416 aa27■■□□□ 1.91
CYTH3-205ENST00000466543 CHIC2Q9UKJ5 165 aa27■■□□□ 1.91
CYTH3-205ENST00000466543 ARHGAP23Q9P227 1491 aa26.99■■□□□ 1.91
CYTH3-205ENST00000466543 HSPA1LP34931 641 aa26.98■■□□□ 1.91
CYTH3-205ENST00000466543 PIK3C2BO00750 1634 aa26.98■■□□□ 1.91
CYTH3-205ENST00000466543 SCAF1Q9H7N4 1312 aaKnown RBP26.97■■□□□ 1.91
CYTH3-205ENST00000466543 LTKP29376 864 aa26.97■■□□□ 1.91
CYTH3-205ENST00000466543 SCAF11Q99590 1463 aaKnown RBP26.97■■□□□ 1.91
CYTH3-205ENST00000466543 SLIT1O75093 1534 aa26.96■■□□□ 1.91
CYTH3-205ENST00000466543 LRRC7Q96NW7 1537 aa26.95■■□□□ 1.91
CYTH3-205ENST00000466543 ANKRD30AQ9BXX3 1397 aa26.95■■□□□ 1.9
CYTH3-205ENST00000466543 SOCS7O14512 581 aa26.94■■□□□ 1.9
CYTH3-205ENST00000466543 TOM1O60784 492 aa26.94■■□□□ 1.9
CYTH3-205ENST00000466543 LMTK2Q8IWU2 1503 aa26.93■■□□□ 1.9
CYTH3-205ENST00000466543 SYNMO15061 1565 aa26.91■■□□□ 1.9
CYTH3-205ENST00000466543 ADGRL2O95490 1459 aa26.9■■□□□ 1.9
CYTH3-205ENST00000466543 TXNDC2Q86VQ3 553 aa26.9■■□□□ 1.9
CYTH3-205ENST00000466543 KANK1Q14678 1352 aa26.89■■□□□ 1.9
CYTH3-205ENST00000466543 EFCAB6Q5THR3 1501 aa26.87■■□□□ 1.89
CYTH3-205ENST00000466543 TMEM2Q9UHN6 1383 aa26.86■■□□□ 1.89
CYTH3-205ENST00000466543 IDI1Q13907 227 aa26.86■■□□□ 1.89
CYTH3-205ENST00000466543 XIRP1Q702N8 1843 aaKnown RBP26.86■■□□□ 1.89
CYTH3-205ENST00000466543 MED1Q15648 1581 aaPredicted RBP26.84■■□□□ 1.89
CYTH3-205ENST00000466543 NOS1P29475 1434 aa26.84■■□□□ 1.89
CYTH3-205ENST00000466543 FAM50AQ14320 339 aaKnown RBP26.84■■□□□ 1.89
CYTH3-205ENST00000466543 KDM5AP29375 1690 aaKnown RBP26.84■■□□□ 1.89
CYTH3-205ENST00000466543 EID1Q9Y6B2 187 aa26.79■■□□□ 1.88
CYTH3-205ENST00000466543 ANKRD50Q9ULJ7 1429 aa26.79■■□□□ 1.88
CYTH3-205ENST00000466543 ADGRB3O60242 1522 aa26.77■■□□□ 1.88
CYTH3-205ENST00000466543 STAG3Q9UJ98 1225 aa26.77■■□□□ 1.88
CYTH3-205ENST00000466543 TET3O43151 1660 aa26.76■■□□□ 1.87
CYTH3-205ENST00000466543 SENP3Q9H4L4 574 aaPredicted RBP26.76■■□□□ 1.87
CYTH3-205ENST00000466543 MYO5BQ9ULV0 1848 aa26.73■■□□□ 1.87
CYTH3-205ENST00000466543 RPRD2Q5VT52 1461 aaKnown RBP26.7■■□□□ 1.87
CYTH3-205ENST00000466543 SLC26A8Q96RN1 970 aa26.7■■□□□ 1.86
CYTH3-205ENST00000466543 UNC13BO14795 1591 aa26.7■■□□□ 1.86
CYTH3-205ENST00000466543 GCC2Q8IWJ2 1684 aa26.67■■□□□ 1.86
CYTH3-205ENST00000466543 SLC52A1Q9NWF4 448 aa26.67■■□□□ 1.86
CYTH3-205ENST00000466543 TMEM94Q12767 1356 aa26.66■■□□□ 1.86
CYTH3-205ENST00000466543 ZFYVE9O95405 1425 aa26.65■■□□□ 1.86
CYTH3-205ENST00000466543 RBM33Q96EV2 1170 aaKnown RBP26.65■■□□□ 1.86
CYTH3-205ENST00000466543 TMEM131LA2VDJ0 1609 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms